RNA–Protein interactions for RNA: ENST00000507367.1

SMAD1-206, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-206ENST00000507367 TTLL11Q8NHH1 800 aa9.5□□□□□ -0.89
SMAD1-206ENST00000507367 GPATCH3Q96I76 525 aa9.5□□□□□ -0.89
SMAD1-206ENST00000507367 CDC5LQ99459 802 aaKnown RBP9.5□□□□□ -0.89
SMAD1-206ENST00000507367 COPRSQ9NQ92 184 aa9.5□□□□□ -0.89
SMAD1-206ENST00000507367 PARP3Q9Y6F1 533 aa9.5□□□□□ -0.89
SMAD1-206ENST00000507367 COL24A1Q17RW2 1714 aa9.5□□□□□ -0.89
SMAD1-206ENST00000507367 QSER1Q2KHR3 1735 aa9.49□□□□□ -0.89
SMAD1-206ENST00000507367 SERPINB2P05120 415 aa9.49□□□□□ -0.89
SMAD1-206ENST00000507367 HCLS1P14317 486 aaPredicted RBP9.49□□□□□ -0.89
SMAD1-206ENST00000507367 IL15P40933 162 aaPredicted RBP9.49□□□□□ -0.89
SMAD1-206ENST00000507367 RGS3P49796 1198 aa9.49□□□□□ -0.89
SMAD1-206ENST00000507367 FAM161AQ3B820 660 aa9.49□□□□□ -0.89
SMAD1-206ENST00000507367 CLASRPQ8N2M8 674 aaKnown RBP9.49□□□□□ -0.89
SMAD1-206ENST00000507367 SLC16A10Q8TF71 515 aa9.49□□□□□ -0.89
SMAD1-206ENST00000507367 LNPKQ9C0E8 428 aa9.49□□□□□ -0.89
SMAD1-206ENST00000507367 RTL9Q8NET4 1388 aa9.49□□□□□ -0.89
SMAD1-206ENST00000507367 MYH3P11055 1940 aa9.48□□□□□ -0.89
SMAD1-206ENST00000507367 LAMB2P55268 1798 aa9.48□□□□□ -0.89
SMAD1-206ENST00000507367 CIAO1O76071 339 aa9.48□□□□□ -0.89
SMAD1-206ENST00000507367 ITGA6P23229 1130 aa9.48□□□□□ -0.89
SMAD1-206ENST00000507367 TM4SF1P30408 202 aa9.48□□□□□ -0.89
SMAD1-206ENST00000507367 IGHMBP2P38935 993 aaKnown RBP9.48□□□□□ -0.89
SMAD1-206ENST00000507367 PTPN12Q05209 780 aaKnown RBP9.48□□□□□ -0.89
SMAD1-206ENST00000507367 UPF1Q92900 1129 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMAD1-206ENST00000507367 MPHOSPH8Q99549 860 aa9.48□□□□□ -0.89
SMAD1-206ENST00000507367 SIL1Q9H173 461 aa9.48□□□□□ -0.89
SMAD1-206ENST00000507367 GREM2Q9H772 168 aa9.48□□□□□ -0.89
SMAD1-206ENST00000507367 ANO8Q9HCE9 1232 aaPredicted RBP9.48□□□□□ -0.89
SMAD1-206ENST00000507367 RIC1Q4ADV7 1423 aa9.48□□□□□ -0.89
SMAD1-206ENST00000507367 EYA2O00167 538 aa9.47□□□□□ -0.89
SMAD1-206ENST00000507367 POLRMTO00411 1230 aaKnown RBP9.47□□□□□ -0.89
SMAD1-206ENST00000507367 MMP10P09238 476 aa9.47□□□□□ -0.89
SMAD1-206ENST00000507367 IFIT2P09913 472 aaKnown RBP9.47□□□□□ -0.89
SMAD1-206ENST00000507367 SF3B3Q15393 1217 aaKnown RBP9.47□□□□□ -0.89
SMAD1-206ENST00000507367 LDHAL6AQ6ZMR3 332 aa9.47□□□□□ -0.89
SMAD1-206ENST00000507367 DDX46Q7L014 1031 aaKnown RBP9.47□□□□□ -0.89
SMAD1-206ENST00000507367 SYNE4Q8N205 404 aa9.47□□□□□ -0.89
SMAD1-206ENST00000507367 RHPN1Q8TCX5 695 aa9.47□□□□□ -0.89
SMAD1-206ENST00000507367 RPGRQ92834 1020 aaKnown RBP9.47□□□□□ -0.89
SMAD1-206ENST00000507367 CCDC85AQ96PX6 553 aaPredicted RBP9.47□□□□□ -0.89
SMAD1-206ENST00000507367 BCL11AQ9H165 835 aa9.47□□□□□ -0.89
SMAD1-206ENST00000507367 CNNM1Q9NRU3 951 aa9.47□□□□□ -0.89
SMAD1-206ENST00000507367 PA2G4Q9UQ80 394 aaKnown RBP9.47□□□□□ -0.89
SMAD1-206ENST00000507367 AKAP2Q9Y2D5 859 aa9.47□□□□□ -0.89
SMAD1-206ENST00000507367 TUBGCP6Q96RT7 1819 aa9.47□□□□□ -0.89
SMAD1-206ENST00000507367 PDE6BP35913 854 aa9.46□□□□□ -0.9
SMAD1-206ENST00000507367 RFX5P48382 616 aaPredicted RBP9.46□□□□□ -0.9
SMAD1-206ENST00000507367 PRR5LQ6MZQ0 368 aa9.46□□□□□ -0.9
SMAD1-206ENST00000507367 ANKRD18AQ8IVF6 992 aa9.46□□□□□ -0.9
SMAD1-206ENST00000507367 KLHDC4Q8TBB5 520 aa9.46□□□□□ -0.9
SMAD1-206ENST00000507367 CEP126Q9P2H0 1117 aa9.46□□□□□ -0.9
SMAD1-206ENST00000507367 DDX60Q8IY21 1712 aaKnown RBP9.45□□□□□ -0.9
SMAD1-206ENST00000507367 SMARCA5O60264 1052 aaPredicted RBP9.45□□□□□ -0.9
SMAD1-206ENST00000507367 DDR1Q08345 913 aa9.45□□□□□ -0.9
SMAD1-206ENST00000507367 METTL24Q5JXM2 366 aa9.45□□□□□ -0.9
SMAD1-206ENST00000507367 MSL1Q68DK7 614 aa9.45□□□□□ -0.9
SMAD1-206ENST00000507367 RBM17Q96I25 401 aaKnown RBP9.45□□□□□ -0.9
SMAD1-206ENST00000507367 BRIP1Q9BX63 1249 aa9.45□□□□□ -0.9
SMAD1-206ENST00000507367 TMX4Q9H1E5 349 aaPredicted RBP9.45□□□□□ -0.9
SMAD1-206ENST00000507367 IL1RAPL2Q9NP60 686 aa9.45□□□□□ -0.9
SMAD1-206ENST00000507367 GPR108Q9NPR9 543 aa9.45□□□□□ -0.9
SMAD1-206ENST00000507367 MROH5Q6ZUA9 1318 aa9.45□□□□□ -0.9
SMAD1-206ENST00000507367 ABCC12Q96J65 1359 aa9.45□□□□□ -0.9
SMAD1-206ENST00000507367 ERC2O15083 957 aa9.44□□□□□ -0.9
SMAD1-206ENST00000507367 EIF5BO60841 1220 aaKnown RBP9.44□□□□□ -0.9
SMAD1-206ENST00000507367 MX1P20591 662 aa9.44□□□□□ -0.9
SMAD1-206ENST00000507367 POLD1P28340 1107 aa9.44□□□□□ -0.9
SMAD1-206ENST00000507367 TFCP2Q12800 502 aa9.44□□□□□ -0.9
SMAD1-206ENST00000507367 AACSQ86V21 672 aa9.44□□□□□ -0.9
SMAD1-206ENST00000507367 ZNF594Q96JF6 807 aaPredicted RBP9.44□□□□□ -0.9
SMAD1-206ENST00000507367 AOX1Q06278 1338 aa9.44□□□□□ -0.9
SMAD1-206ENST00000507367 TTC41PQ6P2S7 1318 aa9.43□□□□□ -0.9
SMAD1-206ENST00000507367 SASH1O94885 1247 aa9.43□□□□□ -0.9
SMAD1-206ENST00000507367 PDE4AP27815 886 aa9.43□□□□□ -0.9
SMAD1-206ENST00000507367 RPS8P62241 208 aaKnown RBP9.43□□□□□ -0.9
SMAD1-206ENST00000507367 GORABQ5T7V8 394 aa9.43□□□□□ -0.9
SMAD1-206ENST00000507367 ATG9AQ7Z3C6 839 aa9.43□□□□□ -0.9
SMAD1-206ENST00000507367 TMC4Q7Z404 712 aa9.43□□□□□ -0.9
SMAD1-206ENST00000507367 ANKRD2Q9GZV1 360 aa9.43□□□□□ -0.9
SMAD1-206ENST00000507367 BSDC1Q9NW68 430 aaPredicted RBP9.43□□□□□ -0.9
SMAD1-206ENST00000507367 BBOX1O75936 387 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 NPR1P16066 1061 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 ALDH1B1P30837 517 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 PDE1AP54750 535 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 GRAPQ13588 217 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 PUM3Q15397 648 aaKnown RBP9.42□□□□□ -0.9
SMAD1-206ENST00000507367 CRY2Q49AN0 593 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 LRRC24Q50LG9 513 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 TNNI3KQ59H18 835 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 BMP2KLQ5H9B9 411 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 CASC1Q6TDU7 716 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 PLEKHM2Q8IWE5 1019 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 GRAPLQ8TC17 118 aaPredicted RBP9.42□□□□□ -0.9
SMAD1-206ENST00000507367 NEUROD6Q96NK8 337 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 MTFR1LQ9H019 292 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 OSBPL3Q9H4L5 887 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 SEC31BQ9NQW1 1179 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 ECHDC1Q9NTX5 307 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 STAP2Q9UGK3 403 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms