RNA–Protein interactions for RNA: ENST00000507148.1

ATR-203, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-203ENST00000507148 SLX4Q8IY92 1834 aa17.65■□□□□ 0.42
ATR-203ENST00000507148 CACNA1SQ13698 1873 aa17.65■□□□□ 0.42
ATR-203ENST00000507148 RTL9Q8NET4 1388 aa17.65■□□□□ 0.42
ATR-203ENST00000507148 RLBP1P12271 317 aa17.64■□□□□ 0.41
ATR-203ENST00000507148 CTSWP56202 376 aa17.64■□□□□ 0.41
ATR-203ENST00000507148 FOXO4P98177 505 aa17.64■□□□□ 0.41
ATR-203ENST00000507148 CCDC152Q4G0S7 254 aa17.64■□□□□ 0.41
ATR-203ENST00000507148 DDX46Q7L014 1031 aaKnown RBP17.64■□□□□ 0.41
ATR-203ENST00000507148 PLIN1O60240 522 aa17.63■□□□□ 0.41
ATR-203ENST00000507148 GNAI3P08754 354 aa17.63■□□□□ 0.41
ATR-203ENST00000507148 KAZALD1Q96I82 304 aa17.63■□□□□ 0.41
ATR-203ENST00000507148 BCS1LQ9Y276 419 aa17.63■□□□□ 0.41
ATR-203ENST00000507148 TAF1P21675 1872 aa17.63■□□□□ 0.41
ATR-203ENST00000507148 BBOX1O75936 387 aa17.62■□□□□ 0.41
ATR-203ENST00000507148 PRPF40BQ6NWY9 871 aaKnown RBP17.62■□□□□ 0.41
ATR-203ENST00000507148 SUCLG2Q96I99 432 aa17.62■□□□□ 0.41
ATR-203ENST00000507148 GOLGB1Q14789 3259 aaKnown RBP17.62■□□□□ 0.41
ATR-203ENST00000507148 DCAF8L1A6NGE4 600 aa17.61■□□□□ 0.41
ATR-203ENST00000507148 UBTFL1P0CB47 393 aaPredicted RBP17.61■□□□□ 0.41
ATR-203ENST00000507148 YBX3P16989 372 aaKnown RBP eCLIP17.61■□□□□ 0.41
ATR-203ENST00000507148 GRAPQ13588 217 aa17.61■□□□□ 0.41
ATR-203ENST00000507148 GPR162Q16538 588 aa17.61■□□□□ 0.41
ATR-203ENST00000507148 RABL6Q3YEC7 729 aaPredicted RBP17.61■□□□□ 0.41
ATR-203ENST00000507148 GRAPLQ8TC17 118 aaPredicted RBP17.61■□□□□ 0.41
ATR-203ENST00000507148 PANK1Q8TE04 598 aa17.61■□□□□ 0.41
ATR-203ENST00000507148 MEIS3Q99687 375 aa17.61■□□□□ 0.41
ATR-203ENST00000507148 ZBTB7BO15156 539 aaPredicted RBP17.6■□□□□ 0.41
ATR-203ENST00000507148 GRIN3BO60391 1043 aa17.6■□□□□ 0.41
ATR-203ENST00000507148 RRP1P56182 461 aaKnown RBP17.6■□□□□ 0.41
ATR-203ENST00000507148 EPHA10Q5JZY3 1008 aa17.6■□□□□ 0.41
ATR-203ENST00000507148 TMC4Q7Z404 712 aa17.6■□□□□ 0.41
ATR-203ENST00000507148 ITPRIPQ8IWB1 547 aa17.6■□□□□ 0.41
ATR-203ENST00000507148 C7orf43Q8WVR3 580 aa17.6■□□□□ 0.41
ATR-203ENST00000507148 RPS8P62241 208 aaKnown RBP17.59■□□□□ 0.41
ATR-203ENST00000507148 MVPQ14764 893 aaKnown RBP17.59■□□□□ 0.41
ATR-203ENST00000507148 SOGA3Q5TF21 947 aa17.59■□□□□ 0.41
ATR-203ENST00000507148 CC2D2BQ6DHV5 1058 aa17.59■□□□□ 0.41
ATR-203ENST00000507148 LMBR1LQ6UX01 489 aa17.59■□□□□ 0.41
ATR-203ENST00000507148 GREM2Q9H772 168 aa17.59■□□□□ 0.41
ATR-203ENST00000507148 GRIPAP1Q4V328 841 aa17.58■□□□□ 0.4
ATR-203ENST00000507148 CDC5LQ99459 802 aaKnown RBP17.58■□□□□ 0.4
ATR-203ENST00000507148 CHMP4BQ9H444 224 aaKnown RBP17.58■□□□□ 0.4
ATR-203ENST00000507148 BICC1Q9H694 974 aaKnown RBP17.58■□□□□ 0.4
ATR-203ENST00000507148 SEC31BQ9NQW1 1179 aa17.58■□□□□ 0.4
ATR-203ENST00000507148 WWC3Q9ULE0 1092 aa17.58■□□□□ 0.4
ATR-203ENST00000507148 DDX19BQ9UMR2 479 aa17.58■□□□□ 0.4
ATR-203ENST00000507148 FER1L6Q2WGJ9 1857 aa17.58■□□□□ 0.4
ATR-203ENST00000507148 ITGA6P23229 1130 aa17.57■□□□□ 0.4
ATR-203ENST00000507148 C20orf194Q5TEA3 1177 aa17.57■□□□□ 0.4
ATR-203ENST00000507148 SP8Q8IXZ3 490 aa17.57■□□□□ 0.4
ATR-203ENST00000507148 PELP1Q8IZL8 1130 aaKnown RBP17.57■□□□□ 0.4
ATR-203ENST00000507148 ANKRD44Q8N8A2 993 aa17.57■□□□□ 0.4
ATR-203ENST00000507148 CELF1Q92879 486 aaKnown RBP17.57■□□□□ 0.4
ATR-203ENST00000507148 ATP6V0A2Q9Y487 856 aa17.57■□□□□ 0.4
ATR-203ENST00000507148 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
ATR-203ENST00000507148 PPEF1O14829 653 aaPredicted RBP17.56■□□□□ 0.4
ATR-203ENST00000507148 C21orf2O43822 256 aa17.56■□□□□ 0.4
ATR-203ENST00000507148 GNAI2P04899 355 aa17.56■□□□□ 0.4
ATR-203ENST00000507148 IFIT5Q13325 482 aaKnown RBP17.56■□□□□ 0.4
ATR-203ENST00000507148 FAM161AQ3B820 660 aa17.56■□□□□ 0.4
ATR-203ENST00000507148 CCDC85AQ96PX6 553 aaPredicted RBP17.56■□□□□ 0.4
ATR-203ENST00000507148 LRRFIP2Q9Y608 721 aaKnown RBP17.56■□□□□ 0.4
ATR-203ENST00000507148 LRRC37AA6NMS7 1700 aa17.55■□□□□ 0.4
ATR-203ENST00000507148 COL4A1P02462 1669 aa17.55■□□□□ 0.4
ATR-203ENST00000507148 CCDC57Q2TAC2 916 aa17.55■□□□□ 0.4
ATR-203ENST00000507148 ANKRD18AQ8IVF6 992 aa17.55■□□□□ 0.4
ATR-203ENST00000507148 RTKN2Q8IZC4 609 aa17.55■□□□□ 0.4
ATR-203ENST00000507148 BSDC1Q9NW68 430 aaPredicted RBP17.55■□□□□ 0.4
ATR-203ENST00000507148 COG6Q9Y2V7 657 aa17.55■□□□□ 0.4
ATR-203ENST00000507148 SNED1Q8TER0 1413 aa17.55■□□□□ 0.4
ATR-203ENST00000507148 UTRNP46939 3433 aa17.54■□□□□ 0.4
ATR-203ENST00000507148 MTX1Q13505 466 aa17.54■□□□□ 0.4
ATR-203ENST00000507148 CCDC93Q567U6 631 aa17.54■□□□□ 0.4
ATR-203ENST00000507148 TMX4Q9H1E5 349 aaPredicted RBP17.54■□□□□ 0.4
ATR-203ENST00000507148 CHMP3Q9Y3E7 222 aa17.54■□□□□ 0.4
ATR-203ENST00000507148 SBF1O95248 1867 aa17.53■□□□□ 0.4
ATR-203ENST00000507148 IGHMBP2P38935 993 aaKnown RBP17.53■□□□□ 0.4
ATR-203ENST00000507148 SPEF2Q9C093 1822 aa17.53■□□□□ 0.4
ATR-203ENST00000507148 CHD4Q14839 1912 aa17.53■□□□□ 0.4
ATR-203ENST00000507148 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.4
ATR-203ENST00000507148 ZBTB40Q9NUA8 1239 aa17.52■□□□□ 0.4
ATR-203ENST00000507148 SUPT16HQ9Y5B9 1047 aaKnown RBP17.52■□□□□ 0.4
ATR-203ENST00000507148 ARHGAP27Q6ZUM4 889 aa17.51■□□□□ 0.39
ATR-203ENST00000507148 PSMD1Q99460 953 aa17.51■□□□□ 0.39
ATR-203ENST00000507148 MPHOSPH8Q99549 860 aa17.51■□□□□ 0.39
ATR-203ENST00000507148 ZNF219Q9P2Y4 722 aaPredicted RBP17.51■□□□□ 0.39
ATR-203ENST00000507148 CCDC88AQ3V6T2 1871 aa17.5■□□□□ 0.39
ATR-203ENST00000507148 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
ATR-203ENST00000507148 OLFM4Q6UX06 510 aa17.5■□□□□ 0.39
ATR-203ENST00000507148 RTFDC1Q9BY42 306 aaPredicted RBP17.5■□□□□ 0.39
ATR-203ENST00000507148 PODXL2Q9NZ53 605 aa17.5■□□□□ 0.39
ATR-203ENST00000507148 MINPP1Q9UNW1 487 aa17.5■□□□□ 0.39
ATR-203ENST00000507148 LTBP1Q14766 1721 aa17.5■□□□□ 0.39
ATR-203ENST00000507148 NFKBIEO00221 500 aa17.49■□□□□ 0.39
ATR-203ENST00000507148 FKBP4Q02790 459 aaKnown RBP eCLIP17.49■□□□□ 0.39
ATR-203ENST00000507148 TAF7LQ5H9L4 462 aa17.49■□□□□ 0.39
ATR-203ENST00000507148 LDHAL6AQ6ZMR3 332 aa17.49■□□□□ 0.39
ATR-203ENST00000507148 MPNDQ8N594 471 aa17.49■□□□□ 0.39
ATR-203ENST00000507148 TAOK3Q9H2K8 898 aa17.49■□□□□ 0.39
ATR-203ENST00000507148 FBXO3Q9UK99 471 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms