RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 GJA3Q9Y6H8 435 aa18.58■□□□□ 0.56
HMGCS1-203ENST00000507004 CDHR2Q9BYE9 1310 aa18.57■□□□□ 0.56
HMGCS1-203ENST00000507004 ELL2O00472 640 aaPredicted RBP18.57■□□□□ 0.56
HMGCS1-203ENST00000507004 IRS4O14654 1257 aaPredicted RBP18.57■□□□□ 0.56
HMGCS1-203ENST00000507004 KIAA2012Q0VF49 1180 aa18.57■□□□□ 0.56
HMGCS1-203ENST00000507004 FAM89AQ96GI7 184 aa18.57■□□□□ 0.56
HMGCS1-203ENST00000507004 MRS2Q9HD23 443 aa18.57■□□□□ 0.56
HMGCS1-203ENST00000507004 PASKQ96RG2 1323 aa18.56■□□□□ 0.56
HMGCS1-203ENST00000507004 TNIP1Q15025 636 aa18.56■□□□□ 0.56
HMGCS1-203ENST00000507004 AOC3Q16853 763 aa18.56■□□□□ 0.56
HMGCS1-203ENST00000507004 IFFO2Q5TF58 517 aa18.56■□□□□ 0.56
HMGCS1-203ENST00000507004 USP50Q70EL3 339 aaPredicted RBP18.56■□□□□ 0.56
HMGCS1-203ENST00000507004 WWC1Q8IX03 1113 aa18.56■□□□□ 0.56
HMGCS1-203ENST00000507004 C8orf58Q8NAV2 365 aa18.56■□□□□ 0.56
HMGCS1-203ENST00000507004 LAMB2P55268 1798 aa18.55■□□□□ 0.56
HMGCS1-203ENST00000507004 PCCAP05165 728 aaPredicted RBP18.55■□□□□ 0.56
HMGCS1-203ENST00000507004 POTEIP0CG38 1075 aa18.55■□□□□ 0.56
HMGCS1-203ENST00000507004 POTEJP0CG39 1038 aa18.55■□□□□ 0.56
HMGCS1-203ENST00000507004 METTL22Q9BUU2 404 aaPredicted RBP18.55■□□□□ 0.56
HMGCS1-203ENST00000507004 PHAXQ9H814 394 aaKnown RBP18.55■□□□□ 0.56
HMGCS1-203ENST00000507004 CWC25Q9NXE8 425 aaPredicted RBP18.55■□□□□ 0.56
HMGCS1-203ENST00000507004 TMEM88BA6NKF7 163 aa18.54■□□□□ 0.56
HMGCS1-203ENST00000507004 NEXNQ0ZGT2 675 aa18.54■□□□□ 0.56
HMGCS1-203ENST00000507004 EYA3Q99504 573 aa18.54■□□□□ 0.56
HMGCS1-203ENST00000507004 MYD88Q99836 296 aa18.54■□□□□ 0.56
HMGCS1-203ENST00000507004 ITGBL1O95965 494 aaPredicted RBP18.53■□□□□ 0.56
HMGCS1-203ENST00000507004 SCNN1DP51172 638 aa18.53■□□□□ 0.56
HMGCS1-203ENST00000507004 RPS8P62241 208 aaKnown RBP18.53■□□□□ 0.56
HMGCS1-203ENST00000507004 CCDC152Q4G0S7 254 aa18.53■□□□□ 0.56
HMGCS1-203ENST00000507004 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
HMGCS1-203ENST00000507004 KSR2Q6VAB6 950 aa18.53■□□□□ 0.56
HMGCS1-203ENST00000507004 WDR63Q8IWG1 891 aa18.53■□□□□ 0.56
HMGCS1-203ENST00000507004 CNTROBQ8N137 903 aa18.53■□□□□ 0.56
HMGCS1-203ENST00000507004 DDX60Q8IY21 1712 aaKnown RBP18.52■□□□□ 0.56
HMGCS1-203ENST00000507004 PDE8AO60658 829 aa18.52■□□□□ 0.56
HMGCS1-203ENST00000507004 TWISTNBQ3B726 338 aaPredicted RBP18.52■□□□□ 0.56
HMGCS1-203ENST00000507004 CCDC184Q52MB2 194 aa18.52■□□□□ 0.56
HMGCS1-203ENST00000507004 ADARB2Q9NS39 739 aaKnown RBP18.52■□□□□ 0.56
HMGCS1-203ENST00000507004 NSFL1CQ9UNZ2 370 aaKnown RBP18.52■□□□□ 0.56
HMGCS1-203ENST00000507004 ADAMTSL1Q8N6G6 1762 aa18.52■□□□□ 0.55
HMGCS1-203ENST00000507004 COL4A5P29400 1685 aa18.51■□□□□ 0.55
HMGCS1-203ENST00000507004 CXCL9Q07325 125 aa18.51■□□□□ 0.55
HMGCS1-203ENST00000507004 WASHC4Q2M389 1173 aa18.51■□□□□ 0.55
HMGCS1-203ENST00000507004 CELF1Q92879 486 aaKnown RBP18.51■□□□□ 0.55
HMGCS1-203ENST00000507004 GPRC5DQ9NZD1 345 aa18.51■□□□□ 0.55
HMGCS1-203ENST00000507004 LRRC37AA6NMS7 1700 aa18.51■□□□□ 0.55
HMGCS1-203ENST00000507004 BCL2L13Q9BXK5 485 aa18.5■□□□□ 0.55
HMGCS1-203ENST00000507004 MAP3K2Q9Y2U5 619 aa18.5■□□□□ 0.55
HMGCS1-203ENST00000507004 EPS15P42566 896 aa18.49■□□□□ 0.55
HMGCS1-203ENST00000507004 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
HMGCS1-203ENST00000507004 TSPYL6Q8N831 410 aa18.49■□□□□ 0.55
HMGCS1-203ENST00000507004 ZC3H15Q8WU90 426 aaKnown RBP18.49■□□□□ 0.55
HMGCS1-203ENST00000507004 TSR2Q969E8 191 aaKnown RBP18.49■□□□□ 0.55
HMGCS1-203ENST00000507004 PODXL2Q9NZ53 605 aa18.49■□□□□ 0.55
HMGCS1-203ENST00000507004 CNTNAP1P78357 1384 aa18.49■□□□□ 0.55
HMGCS1-203ENST00000507004 PI4KAP2A4QPH2 592 aa18.48■□□□□ 0.55
HMGCS1-203ENST00000507004 C6orf229H3BNL8 230 aa18.48■□□□□ 0.55
HMGCS1-203ENST00000507004 MAP1SQ66K74 1059 aaPredicted RBP18.48■□□□□ 0.55
HMGCS1-203ENST00000507004 PI4KAP1Q8N8J0 262 aa18.48■□□□□ 0.55
HMGCS1-203ENST00000507004 DPF2Q92785 391 aa18.47■□□□□ 0.55
HMGCS1-203ENST00000507004 CDC5LQ99459 802 aaKnown RBP18.47■□□□□ 0.55
HMGCS1-203ENST00000507004 ZC3H12CQ9C0D7 883 aaKnown RBP18.47■□□□□ 0.55
HMGCS1-203ENST00000507004 MKRN1Q9UHC7 482 aaKnown RBP18.47■□□□□ 0.55
HMGCS1-203ENST00000507004 H7C1D1 291 aa18.46■□□□□ 0.55
HMGCS1-203ENST00000507004 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
HMGCS1-203ENST00000507004 HSPA1AP0DMV8 641 aaKnown RBP18.46■□□□□ 0.55
HMGCS1-203ENST00000507004 HSPA1BP0DMV9 641 aaKnown RBP18.46■□□□□ 0.55
HMGCS1-203ENST00000507004 RPS12P25398 132 aaKnown RBP18.46■□□□□ 0.55
HMGCS1-203ENST00000507004 GMPSP49915 693 aaPredicted RBP18.46■□□□□ 0.55
HMGCS1-203ENST00000507004 ANKRD18AQ8IVF6 992 aa18.46■□□□□ 0.55
HMGCS1-203ENST00000507004 CACNA1FO60840 1977 aa18.46■□□□□ 0.55
HMGCS1-203ENST00000507004 RASSF10A6NK89 507 aa18.45■□□□□ 0.54
HMGCS1-203ENST00000507004 GPSM2P81274 684 aa18.45■□□□□ 0.54
HMGCS1-203ENST00000507004 SLC51AQ86UW1 340 aa18.45■□□□□ 0.54
HMGCS1-203ENST00000507004 TBC1D16Q8TBP0 767 aa18.45■□□□□ 0.54
HMGCS1-203ENST00000507004 MYH16Q9H6N6 1097 aa18.45■□□□□ 0.54
HMGCS1-203ENST00000507004 DUOX1Q9NRD9 1551 aa18.45■□□□□ 0.54
HMGCS1-203ENST00000507004 FANCIQ9NVI1 1328 aa18.45■□□□□ 0.54
HMGCS1-203ENST00000507004 LTBP1Q14766 1721 aa18.44■□□□□ 0.54
HMGCS1-203ENST00000507004 G3V3G9 751 aa18.44■□□□□ 0.54
HMGCS1-203ENST00000507004 RAD17O75943 681 aa18.44■□□□□ 0.54
HMGCS1-203ENST00000507004 DEFB115Q30KQ5 88 aa18.44■□□□□ 0.54
HMGCS1-203ENST00000507004 DCAF8Q5TAQ9 597 aa18.44■□□□□ 0.54
HMGCS1-203ENST00000507004 ZNF428Q96B54 188 aa18.44■□□□□ 0.54
HMGCS1-203ENST00000507004 ANKIB1Q9P2G1 1089 aa18.44■□□□□ 0.54
HMGCS1-203ENST00000507004 POLLQ9UGP5 575 aa18.44■□□□□ 0.54
HMGCS1-203ENST00000507004 PGAP2Q9UHJ9 254 aa18.44■□□□□ 0.54
HMGCS1-203ENST00000507004 GGA1Q9UJY5 639 aa18.44■□□□□ 0.54
HMGCS1-203ENST00000507004 RTL9Q8NET4 1388 aa18.43■□□□□ 0.54
HMGCS1-203ENST00000507004 NEURL1BA8MQ27 555 aa18.43■□□□□ 0.54
HMGCS1-203ENST00000507004 IGKV5-2P06315 115 aa18.43■□□□□ 0.54
HMGCS1-203ENST00000507004 CTSWP56202 376 aa18.43■□□□□ 0.54
HMGCS1-203ENST00000507004 FLIIQ13045 1269 aa18.43■□□□□ 0.54
HMGCS1-203ENST00000507004 CNOT7Q9UIV1 285 aaKnown RBP18.43■□□□□ 0.54
HMGCS1-203ENST00000507004 TAF1P21675 1872 aa18.43■□□□□ 0.54
HMGCS1-203ENST00000507004 XDHP47989 1333 aa18.43■□□□□ 0.54
HMGCS1-203ENST00000507004 YDJCA8MPS7 323 aa18.42■□□□□ 0.54
HMGCS1-203ENST00000507004 ATP2B4P23634 1241 aa18.42■□□□□ 0.54
HMGCS1-203ENST00000507004 ECE1P42892 770 aa18.42■□□□□ 0.54
HMGCS1-203ENST00000507004 FKBP5Q13451 457 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms