RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 ZNF622Q969S3 477 aaKnown RBP eCLIP12.27□□□□□ -0.451e-6■□□□□ 10
SFXN1-205ENST00000506963 TNNQ9UQP3 1299 aa12.27□□□□□ -0.45
SFXN1-205ENST00000506963 FOXO4P98177 505 aa12.26□□□□□ -0.45
SFXN1-205ENST00000506963 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
SFXN1-205ENST00000506963 RABL6Q3YEC7 729 aaPredicted RBP12.26□□□□□ -0.45
SFXN1-205ENST00000506963 CCDC152Q4G0S7 254 aa12.26□□□□□ -0.45
SFXN1-205ENST00000506963 PRPF40BQ6NWY9 871 aaKnown RBP12.26□□□□□ -0.45
SFXN1-205ENST00000506963 DDX46Q7L014 1031 aaKnown RBP12.26□□□□□ -0.45
SFXN1-205ENST00000506963 TMC4Q7Z404 712 aa12.26□□□□□ -0.45
SFXN1-205ENST00000506963 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.26□□□□□ -0.45
SFXN1-205ENST00000506963 KAZALD1Q96I82 304 aa12.26□□□□□ -0.45
SFXN1-205ENST00000506963 HDAC5Q9UQL6 1122 aa12.26□□□□□ -0.45
SFXN1-205ENST00000506963 SNED1Q8TER0 1413 aa12.26□□□□□ -0.45
SFXN1-205ENST00000506963 CACNA1SQ13698 1873 aa12.25□□□□□ -0.45
SFXN1-205ENST00000506963 BBOX1O75936 387 aa12.25□□□□□ -0.45
SFXN1-205ENST00000506963 RLBP1P12271 317 aa12.25□□□□□ -0.45
SFXN1-205ENST00000506963 GRAPQ13588 217 aa12.25□□□□□ -0.45
SFXN1-205ENST00000506963 SOGA3Q5TF21 947 aa12.25□□□□□ -0.45
SFXN1-205ENST00000506963 CC2D2BQ6DHV5 1058 aa12.25□□□□□ -0.45
SFXN1-205ENST00000506963 FTSJ3Q8IY81 847 aaKnown RBP12.25□□□□□ -0.45
SFXN1-205ENST00000506963 TMEM57Q8N5G2 664 aa12.25□□□□□ -0.45
SFXN1-205ENST00000506963 GRAPLQ8TC17 118 aaPredicted RBP12.25□□□□□ -0.45
SFXN1-205ENST00000506963 CLUAP1Q96AJ1 413 aa12.25□□□□□ -0.45
SFXN1-205ENST00000506963 BCS1LQ9Y276 419 aa12.25□□□□□ -0.45
SFXN1-205ENST00000506963 LRRC37AA6NMS7 1700 aa12.25□□□□□ -0.45
SFXN1-205ENST00000506963 FER1L6Q2WGJ9 1857 aa12.25□□□□□ -0.45
SFXN1-205ENST00000506963 DCAF8L1A6NGE4 600 aa12.24□□□□□ -0.45
SFXN1-205ENST00000506963 GNAI3P08754 354 aa12.24□□□□□ -0.45
SFXN1-205ENST00000506963 TAF1P21675 1872 aa12.24□□□□□ -0.45
SFXN1-205ENST00000506963 GPR162Q16538 588 aa12.24□□□□□ -0.45
SFXN1-205ENST00000506963 GRIPAP1Q4V328 841 aa12.24□□□□□ -0.45
SFXN1-205ENST00000506963 EPHA10Q5JZY3 1008 aa12.24□□□□□ -0.45
SFXN1-205ENST00000506963 SUCLG2Q96I99 432 aa12.24□□□□□ -0.45
SFXN1-205ENST00000506963 COL4A1P02462 1669 aa12.23□□□□□ -0.45
SFXN1-205ENST00000506963 LTBP3Q9NS15 1303 aa12.23□□□□□ -0.45
SFXN1-205ENST00000506963 UBTFL1P0CB47 393 aaPredicted RBP12.23□□□□□ -0.45
SFXN1-205ENST00000506963 RPS8P62241 208 aaKnown RBP12.23□□□□□ -0.45
SFXN1-205ENST00000506963 SP8Q8IXZ3 490 aa12.23□□□□□ -0.45
SFXN1-205ENST00000506963 ANKRD44Q8N8A2 993 aa12.23□□□□□ -0.45
SFXN1-205ENST00000506963 MEIS3Q99687 375 aa12.23□□□□□ -0.45
SFXN1-205ENST00000506963 GREM2Q9H772 168 aa12.23□□□□□ -0.45
SFXN1-205ENST00000506963 ATP6V0A2Q9Y487 856 aa12.23□□□□□ -0.45
SFXN1-205ENST00000506963 PPEF1O14829 653 aaPredicted RBP12.22□□□□□ -0.45
SFXN1-205ENST00000506963 ZBTB7BO15156 539 aaPredicted RBP12.22□□□□□ -0.45
SFXN1-205ENST00000506963 MVPQ14764 893 aaKnown RBP12.22□□□□□ -0.45
SFXN1-205ENST00000506963 LMBR1LQ6UX01 489 aa12.22□□□□□ -0.45
SFXN1-205ENST00000506963 PANK1Q8TE04 598 aa12.22□□□□□ -0.45
SFXN1-205ENST00000506963 CELF1Q92879 486 aaKnown RBP12.22□□□□□ -0.45
SFXN1-205ENST00000506963 CDC5LQ99459 802 aaKnown RBP12.22□□□□□ -0.45
SFXN1-205ENST00000506963 BICC1Q9H694 974 aaKnown RBP12.22□□□□□ -0.45
SFXN1-205ENST00000506963 SEC31BQ9NQW1 1179 aa12.22□□□□□ -0.45
SFXN1-205ENST00000506963 C21orf2O43822 256 aa12.21□□□□□ -0.45
SFXN1-205ENST00000506963 PLIN1O60240 522 aa12.21□□□□□ -0.45
SFXN1-205ENST00000506963 ITGA6P23229 1130 aa12.21□□□□□ -0.45
SFXN1-205ENST00000506963 RRP1P56182 461 aaKnown RBP12.21□□□□□ -0.45
SFXN1-205ENST00000506963 MTX1Q13505 466 aa12.21□□□□□ -0.45
SFXN1-205ENST00000506963 FAM161AQ3B820 660 aa12.21□□□□□ -0.45
SFXN1-205ENST00000506963 CCDC93Q567U6 631 aa12.21□□□□□ -0.45
SFXN1-205ENST00000506963 WWC3Q9ULE0 1092 aa12.21□□□□□ -0.45
SFXN1-205ENST00000506963 DDX19BQ9UMR2 479 aa12.21□□□□□ -0.45
SFXN1-205ENST00000506963 CHD4Q14839 1912 aa12.21□□□□□ -0.46
SFXN1-205ENST00000506963 LTBP1Q14766 1721 aa12.2□□□□□ -0.46
SFXN1-205ENST00000506963 ANKRD18BA2A2Z9 1011 aa12.2□□□□□ -0.46
SFXN1-205ENST00000506963 IFIT5Q13325 482 aaKnown RBP12.2□□□□□ -0.46
SFXN1-205ENST00000506963 ANKRD18AQ8IVF6 992 aa12.2□□□□□ -0.46
SFXN1-205ENST00000506963 ITPRIPQ8IWB1 547 aa12.2□□□□□ -0.46
SFXN1-205ENST00000506963 RTKN2Q8IZC4 609 aa12.2□□□□□ -0.46
SFXN1-205ENST00000506963 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
SFXN1-205ENST00000506963 PSMD1Q99460 953 aa12.2□□□□□ -0.46
SFXN1-205ENST00000506963 CHMP4BQ9H444 224 aaKnown RBP12.2□□□□□ -0.46
SFXN1-205ENST00000506963 BSDC1Q9NW68 430 aaPredicted RBP12.2□□□□□ -0.46
SFXN1-205ENST00000506963 SBF1O95248 1867 aa12.2□□□□□ -0.46
SFXN1-205ENST00000506963 NFKBIEO00221 500 aa12.19□□□□□ -0.46
SFXN1-205ENST00000506963 GNAI2P04899 355 aa12.19□□□□□ -0.46
SFXN1-205ENST00000506963 CCDC57Q2TAC2 916 aa12.19□□□□□ -0.46
SFXN1-205ENST00000506963 CCDC85AQ96PX6 553 aaPredicted RBP12.19□□□□□ -0.46
SFXN1-205ENST00000506963 RTFDC1Q9BY42 306 aaPredicted RBP12.19□□□□□ -0.46
SFXN1-205ENST00000506963 PODXL2Q9NZ53 605 aa12.19□□□□□ -0.46
SFXN1-205ENST00000506963 LRRFIP2Q9Y608 721 aaKnown RBP12.19□□□□□ -0.46
SFXN1-205ENST00000506963 IGHMBP2P38935 993 aaKnown RBP12.18□□□□□ -0.46
SFXN1-205ENST00000506963 RFX5P48382 616 aaPredicted RBP12.18□□□□□ -0.46
SFXN1-205ENST00000506963 FKBP4Q02790 459 aaKnown RBP eCLIP12.18□□□□□ -0.46
SFXN1-205ENST00000506963 C20orf194Q5TEA3 1177 aa12.18□□□□□ -0.46
SFXN1-205ENST00000506963 ARHGAP27Q6ZUM4 889 aa12.18□□□□□ -0.46
SFXN1-205ENST00000506963 TMX4Q9H1E5 349 aaPredicted RBP12.18□□□□□ -0.46
SFXN1-205ENST00000506963 VPS33BQ9H267 617 aa12.18□□□□□ -0.46
SFXN1-205ENST00000506963 TAOK3Q9H2K8 898 aa12.18□□□□□ -0.46
SFXN1-205ENST00000506963 COG6Q9Y2V7 657 aa12.18□□□□□ -0.46
SFXN1-205ENST00000506963 DUOX1Q9NRD9 1551 aa12.18□□□□□ -0.46
SFXN1-205ENST00000506963 DICER1Q9UPY3 1922 aaKnown RBP12.17□□□□□ -0.46
SFXN1-205ENST00000506963 SPEF2Q9C093 1822 aa12.17□□□□□ -0.46
SFXN1-205ENST00000506963 OLFM4Q6UX06 510 aa12.17□□□□□ -0.46
SFXN1-205ENST00000506963 ZBTB40Q9NUA8 1239 aa12.17□□□□□ -0.46
SFXN1-205ENST00000506963 FBXO3Q9UK99 471 aa12.17□□□□□ -0.46
SFXN1-205ENST00000506963 A0A1B0GUL6 1792 aa12.16□□□□□ -0.46
SFXN1-205ENST00000506963 MPNDQ8N594 471 aa12.16□□□□□ -0.46
SFXN1-205ENST00000506963 MPHOSPH8Q99549 860 aa12.16□□□□□ -0.46
SFXN1-205ENST00000506963 MINPP1Q9UNW1 487 aa12.16□□□□□ -0.46
SFXN1-205ENST00000506963 CHMP3Q9Y3E7 222 aa12.16□□□□□ -0.46
SFXN1-205ENST00000506963 XDHP47989 1333 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms