RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 TRIM28Q13263 835 aaKnown RBP9.28□□□□□ -0.92
GYPB-206ENST00000506516 KSR2Q6VAB6 950 aa9.28□□□□□ -0.92
GYPB-206ENST00000506516 NLRP10Q86W26 655 aa9.28□□□□□ -0.92
GYPB-206ENST00000506516 TTLL6Q8N841 843 aa9.28□□□□□ -0.92
GYPB-206ENST00000506516 ZNF622Q969S3 477 aaKnown RBP eCLIP9.28□□□□□ -0.92
GYPB-206ENST00000506516 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
GYPB-206ENST00000506516 CDCA7LQ96GN5 454 aa9.28□□□□□ -0.92
GYPB-206ENST00000506516 TRMT112Q9UI30 125 aaKnown RBP9.28□□□□□ -0.92
GYPB-206ENST00000506516 SCN7AQ01118 1682 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 PI4KAP2A4QPH2 592 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 ATP5J2-PTCD1G3V325 749 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 CT47B1P0C2W7 299 aaPredicted RBP9.27□□□□□ -0.93
GYPB-206ENST00000506516 PLCG2P16885 1265 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 YBX3P16989 372 aaKnown RBP eCLIP9.27□□□□□ -0.936e-7■■■□□ 14.8
GYPB-206ENST00000506516 PDE4AP27815 886 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 FLIIQ13045 1269 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 FKBP5Q13451 457 aaPredicted RBP9.27□□□□□ -0.93
GYPB-206ENST00000506516 ERFEQ4G0M1 354 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 SLC10A5Q5PT55 438 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 NUTM1Q86Y26 1132 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 TRMT2AQ8IZ69 625 aaKnown RBP9.27□□□□□ -0.93
GYPB-206ENST00000506516 PI4KAP1Q8N8J0 262 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 CNKSR1Q969H4 720 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 MASTLQ96GX5 879 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 NLRP3Q96P20 1036 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 MYD88Q99836 296 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 ISCA1Q9BUE6 129 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 SCUBE2Q9NQ36 999 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 WWC3Q9ULE0 1092 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 RNF123Q5XPI4 1314 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 UBN2Q6ZU65 1347 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 PXDNLA1KZ92 1463 aa9.27□□□□□ -0.93
GYPB-206ENST00000506516 KLRG2A4D1S0 409 aaPredicted RBP9.26□□□□□ -0.93
GYPB-206ENST00000506516 NTSR2O95665 410 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 SRGNP10124 158 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 HSP90B1P14625 803 aaKnown RBP9.26□□□□□ -0.93
GYPB-206ENST00000506516 NPR1P16066 1061 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 ALDH1B1P30837 517 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 STYK1Q6J9G0 422 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 ARHGAP27Q6ZUM4 889 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 G2E3Q7L622 706 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 CCDC191Q8NCU4 936 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 KCNV2Q8TDN2 545 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 LARP6Q9BRS8 491 aaKnown RBP9.26□□□□□ -0.93
GYPB-206ENST00000506516 METTL22Q9BUU2 404 aaPredicted RBP9.26□□□□□ -0.93
GYPB-206ENST00000506516 CRISPLD2Q9H0B8 497 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 MAP3K2Q9Y2U5 619 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 GOLGB1Q14789 3259 aaKnown RBP9.26□□□□□ -0.93
GYPB-206ENST00000506516 SH3TC1Q8TE82 1336 aa9.26□□□□□ -0.93
GYPB-206ENST00000506516 IBTKQ9P2D0 1353 aaPredicted RBP9.25□□□□□ -0.93
GYPB-206ENST00000506516 BCORQ6W2J9 1755 aa9.25□□□□□ -0.93
GYPB-206ENST00000506516 UTRNP46939 3433 aa9.25□□□□□ -0.93
GYPB-206ENST00000506516 ALDH1L2Q3SY69 923 aa9.25□□□□□ -0.93
GYPB-206ENST00000506516 RPGRQ92834 1020 aaKnown RBP9.25□□□□□ -0.93
GYPB-206ENST00000506516 RBM17Q96I25 401 aaKnown RBP9.25□□□□□ -0.93
GYPB-206ENST00000506516 CWC25Q9NXE8 425 aaPredicted RBP9.25□□□□□ -0.93
GYPB-206ENST00000506516 MICALL2Q8IY33 904 aa9.24□□□□□ -0.93
GYPB-206ENST00000506516 ZBTB38Q8NAP3 1195 aaPredicted RBP9.24□□□□□ -0.93
GYPB-206ENST00000506516 DNAAF4Q8WXU2 420 aa9.24□□□□□ -0.93
GYPB-206ENST00000506516 FAM89AQ96GI7 184 aa9.24□□□□□ -0.93
GYPB-206ENST00000506516 TMX4Q9H1E5 349 aaPredicted RBP9.24□□□□□ -0.93
GYPB-206ENST00000506516 NRXN2Q9P2S2 1712 aa9.24□□□□□ -0.93
GYPB-206ENST00000506516 G3V3G9 751 aa9.23□□□□□ -0.93
GYPB-206ENST00000506516 HCLS1P14317 486 aaPredicted RBP9.23□□□□□ -0.93
GYPB-206ENST00000506516 YY1P25490 414 aa9.23□□□□□ -0.93
GYPB-206ENST00000506516 MFSD10Q14728 455 aa9.23□□□□□ -0.93
GYPB-206ENST00000506516 E2F4Q16254 413 aa9.23□□□□□ -0.93
GYPB-206ENST00000506516 CRY2Q49AN0 593 aa9.23□□□□□ -0.93
GYPB-206ENST00000506516 SOGA3Q5TF21 947 aa9.23□□□□□ -0.93
GYPB-206ENST00000506516 MRPL50Q8N5N7 158 aaKnown RBP9.23□□□□□ -0.93
GYPB-206ENST00000506516 DDX27Q96GQ7 796 aaKnown RBP9.23□□□□□ -0.93
GYPB-206ENST00000506516 BOLA1Q9Y3E2 137 aa9.23□□□□□ -0.93
GYPB-206ENST00000506516 KIF13BQ9NQT8 1826 aa9.23□□□□□ -0.93
GYPB-206ENST00000506516 ZBED9Q6R2W3 1325 aa9.23□□□□□ -0.93
GYPB-206ENST00000506516 NUP98P52948 1817 aa9.22□□□□□ -0.93
GYPB-206ENST00000506516 AFDNP55196 1824 aaKnown RBP9.22□□□□□ -0.93
GYPB-206ENST00000506516 NEURL1BA8MQ27 555 aa9.22□□□□□ -0.93
GYPB-206ENST00000506516 IRS4O14654 1257 aaPredicted RBP9.22□□□□□ -0.93
GYPB-206ENST00000506516 C21orf2O43822 256 aa9.22□□□□□ -0.93
GYPB-206ENST00000506516 PCCAP05165 728 aaPredicted RBP9.22□□□□□ -0.93
GYPB-206ENST00000506516 HOXA10P31260 410 aaPredicted RBP9.22□□□□□ -0.93
GYPB-206ENST00000506516 RTL5Q5HYW3 569 aaPredicted RBP9.22□□□□□ -0.93
GYPB-206ENST00000506516 PRPF40BQ6NWY9 871 aaKnown RBP9.22□□□□□ -0.93
GYPB-206ENST00000506516 DDX46Q7L014 1031 aaKnown RBP9.22□□□□□ -0.93
GYPB-206ENST00000506516 SYNE4Q8N205 404 aa9.22□□□□□ -0.93
GYPB-206ENST00000506516 LINS1Q8NG48 757 aa9.22□□□□□ -0.93
GYPB-206ENST00000506516 SSH1Q8WYL5 1049 aa9.22□□□□□ -0.93
GYPB-206ENST00000506516 CRAMP1Q96RY5 1269 aa9.22□□□□□ -0.93
GYPB-206ENST00000506516 SMC4Q9NTJ3 1288 aa9.22□□□□□ -0.93
GYPB-206ENST00000506516 PTPRCP08575 1304 aa9.22□□□□□ -0.93
GYPB-206ENST00000506516 ADCY9O60503 1353 aa9.22□□□□□ -0.93
GYPB-206ENST00000506516 RIC1Q4ADV7 1423 aa9.22□□□□□ -0.93
GYPB-206ENST00000506516 PDE8AO60658 829 aa9.21□□□□□ -0.94
GYPB-206ENST00000506516 BBOX1O75936 387 aa9.21□□□□□ -0.94
GYPB-206ENST00000506516 IGKV5-2P06315 115 aa9.21□□□□□ -0.94
GYPB-206ENST00000506516 CWF19L2Q2TBE0 894 aaKnown RBP9.21□□□□□ -0.94
GYPB-206ENST00000506516 SLC4A10Q6U841 1118 aa9.21□□□□□ -0.94
GYPB-206ENST00000506516 ABCC12Q96J65 1359 aa9.21□□□□□ -0.94
GYPB-206ENST00000506516 N4BP2Q86UW6 1770 aaPredicted RBP9.2□□□□□ -0.94
GYPB-206ENST00000506516 F6X3S4 739 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms