RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 USP50Q70EL3 339 aaPredicted RBP13.68□□□□□ -0.22
BRIX1-202ENST00000506023 NIM1KQ8IY84 436 aa13.68□□□□□ -0.22
BRIX1-202ENST00000506023 TRPM4Q8TD43 1214 aa13.68□□□□□ -0.22
BRIX1-202ENST00000506023 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
BRIX1-202ENST00000506023 PSME4Q14997 1843 aa13.68□□□□□ -0.22
BRIX1-202ENST00000506023 ERBB4Q15303 1308 aa13.67□□□□□ -0.22
BRIX1-202ENST00000506023 EIF2S2P20042 333 aaKnown RBP13.67□□□□□ -0.22
BRIX1-202ENST00000506023 FAM161AQ3B820 660 aa13.67□□□□□ -0.22
BRIX1-202ENST00000506023 NECTIN2Q92692 538 aa13.67□□□□□ -0.22
BRIX1-202ENST00000506023 GPR101Q96P66 508 aaPredicted RBP13.67□□□□□ -0.22
BRIX1-202ENST00000506023 RAD17O75943 681 aa13.66□□□□□ -0.22
BRIX1-202ENST00000506023 EGFRP00533 1210 aa13.66□□□□□ -0.22
BRIX1-202ENST00000506023 MAP2K1Q02750 393 aaPredicted RBP13.66□□□□□ -0.22
BRIX1-202ENST00000506023 PAXIP1Q6ZW49 1069 aaPredicted RBP13.66□□□□□ -0.22
BRIX1-202ENST00000506023 SAPCD2Q86UD0 394 aa13.66□□□□□ -0.22
BRIX1-202ENST00000506023 NLRP10Q86W26 655 aa13.66□□□□□ -0.22
BRIX1-202ENST00000506023 UTP14AQ9BVJ6 771 aaKnown RBP13.66□□□□□ -0.22
BRIX1-202ENST00000506023 ADARB2Q9NS39 739 aaKnown RBP13.66□□□□□ -0.22
BRIX1-202ENST00000506023 PGAP2Q9UHJ9 254 aa13.66□□□□□ -0.22
BRIX1-202ENST00000506023 TSPYL4Q9UJ04 414 aa13.66□□□□□ -0.22
BRIX1-202ENST00000506023 DSG3P32926 999 aa13.65□□□□□ -0.22
BRIX1-202ENST00000506023 KIAA2012Q0VF49 1180 aa13.65□□□□□ -0.22
BRIX1-202ENST00000506023 PARP10Q53GL7 1025 aa13.65□□□□□ -0.22
BRIX1-202ENST00000506023 COPS6Q7L5N1 327 aa13.65□□□□□ -0.22
BRIX1-202ENST00000506023 XAGE3Q8WTP9 111 aa13.65□□□□□ -0.22
BRIX1-202ENST00000506023 NLRP3Q96P20 1036 aa13.65□□□□□ -0.22
BRIX1-202ENST00000506023 ZNRF3Q9ULT6 936 aa13.65□□□□□ -0.22
BRIX1-202ENST00000506023 CELF2O95319 508 aaKnown RBP13.64□□□□□ -0.23
BRIX1-202ENST00000506023 PPP1R42Q7Z4L9 355 aa13.64□□□□□ -0.23
BRIX1-202ENST00000506023 SP8Q8IXZ3 490 aa13.64□□□□□ -0.23
BRIX1-202ENST00000506023 SPEF2Q9C093 1822 aa13.64□□□□□ -0.23
BRIX1-202ENST00000506023 AIMP1Q12904 312 aaKnown RBP13.63□□□□□ -0.23
BRIX1-202ENST00000506023 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
BRIX1-202ENST00000506023 CIAPIN1Q6FI81 312 aa13.63□□□□□ -0.23
BRIX1-202ENST00000506023 KCNQ5Q9NR82 932 aa13.63□□□□□ -0.23
BRIX1-202ENST00000506023 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
BRIX1-202ENST00000506023 RTL9Q8NET4 1388 aa13.62□□□□□ -0.23
BRIX1-202ENST00000506023 RIPK4P57078 832 aa13.62□□□□□ -0.23
BRIX1-202ENST00000506023 DPP8Q6V1X1 898 aaPredicted RBP13.62□□□□□ -0.23
BRIX1-202ENST00000506023 MPNDQ8N594 471 aa13.62□□□□□ -0.23
BRIX1-202ENST00000506023 CELF1Q92879 486 aaKnown RBP13.62□□□□□ -0.23
BRIX1-202ENST00000506023 AKAP11Q9UKA4 1901 aa13.62□□□□□ -0.23
BRIX1-202ENST00000506023 TMPOP42166 694 aaKnown RBP13.61□□□□□ -0.23
BRIX1-202ENST00000506023 ECE1P42892 770 aa13.61□□□□□ -0.23
BRIX1-202ENST00000506023 TCIRG1Q13488 830 aa13.61□□□□□ -0.23
BRIX1-202ENST00000506023 GRAPQ13588 217 aa13.61□□□□□ -0.23
BRIX1-202ENST00000506023 SAMD7Q7Z3H4 446 aa13.61□□□□□ -0.23
BRIX1-202ENST00000506023 GRAPLQ8TC17 118 aaPredicted RBP13.61□□□□□ -0.23
BRIX1-202ENST00000506023 VPS33BQ9H267 617 aa13.61□□□□□ -0.23
BRIX1-202ENST00000506023 ZNF408Q9H9D4 720 aa13.61□□□□□ -0.23
BRIX1-202ENST00000506023 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
BRIX1-202ENST00000506023 CCDC85CA6NKD9 419 aa13.6□□□□□ -0.23
BRIX1-202ENST00000506023 BBOX1O75936 387 aa13.6□□□□□ -0.23
BRIX1-202ENST00000506023 SLC34A2O95436 690 aa13.6□□□□□ -0.23
BRIX1-202ENST00000506023 MAP2K2P36507 400 aa13.6□□□□□ -0.23
BRIX1-202ENST00000506023 RGS19P49795 217 aa13.6□□□□□ -0.23
BRIX1-202ENST00000506023 MICALL2Q8IY33 904 aa13.6□□□□□ -0.23
BRIX1-202ENST00000506023 CCDC146Q8IYE0 955 aa13.6□□□□□ -0.23
BRIX1-202ENST00000506023 MCOLN1Q9GZU1 580 aa13.6□□□□□ -0.23
BRIX1-202ENST00000506023 DBNDD1Q9H9R9 158 aa13.6□□□□□ -0.23
BRIX1-202ENST00000506023 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
BRIX1-202ENST00000506023 TRMT112Q9UI30 125 aaKnown RBP13.6□□□□□ -0.23
BRIX1-202ENST00000506023 CNOT7Q9UIV1 285 aaKnown RBP13.6□□□□□ -0.23
BRIX1-202ENST00000506023 TRIM35Q9UPQ4 493 aa13.6□□□□□ -0.23
BRIX1-202ENST00000506023 ASTN2O75129 1339 aaPredicted RBP13.6□□□□□ -0.23
BRIX1-202ENST00000506023 FAM155AB1AL88 458 aaPredicted RBP13.59□□□□□ -0.23
BRIX1-202ENST00000506023 PSMD14O00487 310 aa13.59□□□□□ -0.23
BRIX1-202ENST00000506023 USP48Q86UV5 1035 aa13.59□□□□□ -0.23
BRIX1-202ENST00000506023 ISCA1Q9BUE6 129 aa13.59□□□□□ -0.23
BRIX1-202ENST00000506023 POLLQ9UGP5 575 aa13.59□□□□□ -0.23
BRIX1-202ENST00000506023 SH3TC1Q8TE82 1336 aa13.59□□□□□ -0.23
BRIX1-202ENST00000506023 CDHR2Q9BYE9 1310 aa13.59□□□□□ -0.23
BRIX1-202ENST00000506023 ADM5C9JUS6 153 aa13.58□□□□□ -0.24
BRIX1-202ENST00000506023 ATP5J2-PTCD1G3V325 749 aa13.58□□□□□ -0.24
BRIX1-202ENST00000506023 CHL1O00533 1208 aa13.58□□□□□ -0.24
BRIX1-202ENST00000506023 NEFMP07197 916 aa13.58□□□□□ -0.24
BRIX1-202ENST00000506023 GPSM2P81274 684 aa13.58□□□□□ -0.24
BRIX1-202ENST00000506023 SUPT20HQ8NEM7 779 aa13.58□□□□□ -0.24
BRIX1-202ENST00000506023 FAM89AQ96GI7 184 aa13.58□□□□□ -0.24
BRIX1-202ENST00000506023 HHIPL1Q96JK4 782 aa13.58□□□□□ -0.24
BRIX1-202ENST00000506023 BCL2L13Q9BXK5 485 aa13.58□□□□□ -0.24
BRIX1-202ENST00000506023 PDE4DIPQ5VU43 2346 aa13.57□□□□□ -0.24
BRIX1-202ENST00000506023 MYH3P11055 1940 aa13.57□□□□□ -0.24
BRIX1-202ENST00000506023 RIMBP2O15034 1052 aa13.57□□□□□ -0.24
BRIX1-202ENST00000506023 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
BRIX1-202ENST00000506023 BRPF1P55201 1214 aaPredicted RBP13.57□□□□□ -0.24
BRIX1-202ENST00000506023 TBC1D10BQ4KMP7 808 aaPredicted RBP13.57□□□□□ -0.24
BRIX1-202ENST00000506023 RTL5Q5HYW3 569 aaPredicted RBP13.57□□□□□ -0.24
BRIX1-202ENST00000506023 DDX46Q7L014 1031 aaKnown RBP13.57□□□□□ -0.24
BRIX1-202ENST00000506023 ZC3H15Q8WU90 426 aaKnown RBP13.57□□□□□ -0.24
BRIX1-202ENST00000506023 SF3B3Q15393 1217 aaKnown RBP13.56□□□□□ -0.24
BRIX1-202ENST00000506023 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
BRIX1-202ENST00000506023 DOK7Q18PE1 504 aa13.56□□□□□ -0.24
BRIX1-202ENST00000506023 HSP90AB3PQ58FF7 597 aa13.56□□□□□ -0.24
BRIX1-202ENST00000506023 CDC37L1Q7L3B6 337 aa13.56□□□□□ -0.24
BRIX1-202ENST00000506023 BABAM1Q9NWV8 329 aa13.56□□□□□ -0.24
BRIX1-202ENST00000506023 HUNKP57058 714 aa13.55□□□□□ -0.24
BRIX1-202ENST00000506023 TNIP1Q15025 636 aa13.55□□□□□ -0.24
BRIX1-202ENST00000506023 BEGAINQ9BUH8 593 aa13.55□□□□□ -0.24
BRIX1-202ENST00000506023 SEC31BQ9NQW1 1179 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms