RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 FAM129BQ96TA1 746 aa7.16□□□□□ -1.26
TOPBP1-204ENST00000505804 TMEM63CQ9P1W3 806 aa7.16□□□□□ -1.26
TOPBP1-204ENST00000505804 NSFL1CQ9UNZ2 370 aaKnown RBP7.16□□□□□ -1.26
TOPBP1-204ENST00000505804 RARAP10276 462 aa7.15□□□□□ -1.26
TOPBP1-204ENST00000505804 EHHADHQ08426 723 aa7.15□□□□□ -1.26
TOPBP1-204ENST00000505804 NEUROD1Q13562 356 aa7.15□□□□□ -1.26
TOPBP1-204ENST00000505804 PDE12Q6L8Q7 609 aaKnown RBP7.15□□□□□ -1.26
TOPBP1-204ENST00000505804 DNAJC14Q6Y2X3 702 aaPredicted RBP7.15□□□□□ -1.26
TOPBP1-204ENST00000505804 NIF3L1Q9GZT8 377 aa7.15□□□□□ -1.26
TOPBP1-204ENST00000505804 KLF15Q9UIH9 416 aa7.15□□□□□ -1.26
TOPBP1-204ENST00000505804 ANKRD33BA6NCL7 494 aa7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 GPR182O15218 404 aa7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 MMP20O60882 483 aa7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 MAP2K3P46734 347 aa7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 PLCB3Q01970 1234 aa7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 SRSF11Q05519 484 aaKnown RBP7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 LCE2AQ5TA79 106 aaPredicted RBP7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 ZNF468Q5VIY5 522 aaPredicted RBP7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 DMRTB1Q96MA1 342 aa7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 IGFLR1Q9H665 355 aa7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 EFCC1Q9HA90 598 aa7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 CNTN3Q9P232 1028 aa7.14□□□□□ -1.27
TOPBP1-204ENST00000505804 NEURL1BA8MQ27 555 aa7.13□□□□□ -1.27
TOPBP1-204ENST00000505804 TNFRSF21O75509 655 aa7.13□□□□□ -1.27
TOPBP1-204ENST00000505804 ADAMTS2O95450 1211 aa7.13□□□□□ -1.27
TOPBP1-204ENST00000505804 TTC39BQ5VTQ0 682 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-204ENST00000505804 ABI2Q9NYB9 513 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-204ENST00000505804 FOXD3Q9UJU5 478 aaPredicted RBP7.13□□□□□ -1.27
TOPBP1-204ENST00000505804 TREHO43280 583 aa7.12□□□□□ -1.27
TOPBP1-204ENST00000505804 SIN3BO75182 1162 aa7.12□□□□□ -1.27
TOPBP1-204ENST00000505804 MAP3K6O95382 1288 aa7.12□□□□□ -1.27
TOPBP1-204ENST00000505804 ARAFP10398 606 aa7.12□□□□□ -1.27
TOPBP1-204ENST00000505804 TBC1D8BQ0IIM8 1120 aa7.12□□□□□ -1.27
TOPBP1-204ENST00000505804 DHX32Q7L7V1 743 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-204ENST00000505804 C1orf127Q8N9H9 656 aa7.12□□□□□ -1.27
TOPBP1-204ENST00000505804 TLR7Q9NYK1 1049 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-204ENST00000505804 GGA1Q9UJY5 639 aa7.12□□□□□ -1.27
TOPBP1-204ENST00000505804 CCDC9Q9Y3X0 531 aaKnown RBP7.12□□□□□ -1.27
TOPBP1-204ENST00000505804 CYP2E1P05181 493 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-204ENST00000505804 ADH6P28332 368 aa7.11□□□□□ -1.27
TOPBP1-204ENST00000505804 ORC1Q13415 861 aa7.11□□□□□ -1.27
TOPBP1-204ENST00000505804 DSC3Q14574 896 aa7.11□□□□□ -1.27
TOPBP1-204ENST00000505804 ACDQ96AP0 544 aa7.11□□□□□ -1.27
TOPBP1-204ENST00000505804 ALKBH8Q96BT7 664 aaKnown RBP7.11□□□□□ -1.27
TOPBP1-204ENST00000505804 OXCT2Q9BYC2 517 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-204ENST00000505804 AVENQ9NQS1 362 aaPredicted RBP7.11□□□□□ -1.27
TOPBP1-204ENST00000505804 ZBTB42B2RXF5 422 aa7.1□□□□□ -1.27
TOPBP1-204ENST00000505804 PHACTR2O75167 634 aa7.1□□□□□ -1.27
TOPBP1-204ENST00000505804 PSAPP07602 524 aa7.1□□□□□ -1.27
TOPBP1-204ENST00000505804 SLURP2P0DP57 97 aa7.1□□□□□ -1.27
TOPBP1-204ENST00000505804 FCHSD1Q86WN1 690 aa7.1□□□□□ -1.27
TOPBP1-204ENST00000505804 OR13H1Q8NG92 308 aa7.1□□□□□ -1.27
TOPBP1-204ENST00000505804 UBE2OQ9C0C9 1292 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-204ENST00000505804 CHRDQ9H2X0 955 aa7.1□□□□□ -1.27
TOPBP1-204ENST00000505804 ZFYVE28Q9HCC9 887 aa7.1□□□□□ -1.27
TOPBP1-204ENST00000505804 DNAJB12Q9NXW2 375 aaKnown RBP7.1□□□□□ -1.27
TOPBP1-204ENST00000505804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.1□□□□□ -1.27
TOPBP1-204ENST00000505804 EREGO14944 169 aa7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 NEFLP07196 543 aa7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 CES1P23141 567 aa7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 MAPK8P45983 427 aa7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 MLLT1Q03111 559 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 USPL1Q5W0Q7 1092 aa7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 C1orf229Q6ZS94 237 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 HFE2Q6ZVN8 426 aa7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 NPAS4Q8IUM7 802 aa7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 GOLGA6L1Q8N7Z2 621 aa7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 SNX29Q8TEQ0 813 aa7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 TNFRSF25Q93038 417 aa7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 GDF2Q9UK05 429 aaPredicted RBP7.09□□□□□ -1.27
TOPBP1-204ENST00000505804 EIF1AYO14602 144 aaKnown RBP7.08□□□□□ -1.28
TOPBP1-204ENST00000505804 ERCC3P19447 782 aa7.08□□□□□ -1.28
TOPBP1-204ENST00000505804 PLAURQ03405 335 aa7.08□□□□□ -1.28
TOPBP1-204ENST00000505804 COL13A1Q5TAT6 717 aaPredicted RBP7.08□□□□□ -1.28
TOPBP1-204ENST00000505804 LYPD4Q6UWN0 246 aa7.08□□□□□ -1.28
TOPBP1-204ENST00000505804 GALNT6Q8NCL4 622 aa7.08□□□□□ -1.28
TOPBP1-204ENST00000505804 TRPM4Q8TD43 1214 aa7.08□□□□□ -1.28
TOPBP1-204ENST00000505804 WHAMMQ8TF30 809 aa7.08□□□□□ -1.28
TOPBP1-204ENST00000505804 PMEPA1Q969W9 287 aa7.08□□□□□ -1.28
TOPBP1-204ENST00000505804 CSRNP1Q96S65 589 aa7.08□□□□□ -1.28
TOPBP1-204ENST00000505804 KANSL3Q9P2N6 904 aa7.08□□□□□ -1.28
TOPBP1-204ENST00000505804 LOC102724428A0A0B4J2F2 783 aa7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 ADARB2-AS1A8MUL3 147 aa7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 PHF20L1A8MW92 1017 aa7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 J3QW42 95 aa7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 CPNE3O75131 537 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 POLR3DP05423 398 aaPredicted RBP7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 P4HBP07237 508 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 SOX18P35713 384 aa7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 NRLP54845 237 aa7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 SIK1P57059 783 aa7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 FMR1Q06787 632 aaKnown RBP eCLIP7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 RGS22Q8NE09 1264 aa7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 EDARADDQ8WWZ3 215 aa7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 NSUN5Q96P11 429 aaKnown RBP7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 WWC3Q9ULE0 1092 aa7.07□□□□□ -1.28
TOPBP1-204ENST00000505804 ELOA3CA0A087WX78 387 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-204ENST00000505804 PNMA6FA0A0J9YX94 578 aa7.06□□□□□ -1.28
TOPBP1-204ENST00000505804 ELOA3DA6NLF2 546 aaPredicted RBP7.06□□□□□ -1.28
TOPBP1-204ENST00000505804 CELA2BP08218 269 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms