RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 TCEANC2Q96MN5 208 aa23.39■■□□□ 1.33
SDHA-206ENST00000505555 NEUROD6Q96NK8 337 aa23.39■■□□□ 1.33
SDHA-206ENST00000505555 ME3Q16798 604 aa23.38■■□□□ 1.33
SDHA-206ENST00000505555 TMOD3Q9NYL9 352 aa23.38■■□□□ 1.33
SDHA-206ENST00000505555 GADD45BO75293 160 aaPredicted RBP23.37■■□□□ 1.33
SDHA-206ENST00000505555 TAF5LO75529 589 aa23.37■■□□□ 1.33
SDHA-206ENST00000505555 TIMM10P62072 90 aa23.37■■□□□ 1.33
SDHA-206ENST00000505555 DDX46Q7L014 1031 aaKnown RBP23.37■■□□□ 1.33
SDHA-206ENST00000505555 SEC62Q99442 399 aaKnown RBP23.37■■□□□ 1.33
SDHA-206ENST00000505555 UBR2Q8IWV8 1755 aa23.37■■□□□ 1.33
SDHA-206ENST00000505555 STX6O43752 255 aa23.37■■□□□ 1.33
SDHA-206ENST00000505555 ST3GAL1Q11201 340 aa23.37■■□□□ 1.33
SDHA-206ENST00000505555 CCDC129Q6ZRS4 1044 aa23.37■■□□□ 1.33
SDHA-206ENST00000505555 USP48Q86UV5 1035 aa23.37■■□□□ 1.33
SDHA-206ENST00000505555 ASAP1Q9ULH1 1129 aa23.37■■□□□ 1.33
SDHA-206ENST00000505555 TPCN1Q9ULQ1 816 aa23.37■■□□□ 1.33
SDHA-206ENST00000505555 SYCE3A1L190 88 aa23.36■■□□□ 1.33
SDHA-206ENST00000505555 ZSCAN22P10073 491 aaPredicted RBP23.36■■□□□ 1.33
SDHA-206ENST00000505555 GJB2P29033 226 aa23.36■■□□□ 1.33
SDHA-206ENST00000505555 LRRC24Q50LG9 513 aa23.36■■□□□ 1.33
SDHA-206ENST00000505555 CCDC191Q8NCU4 936 aa23.36■■□□□ 1.33
SDHA-206ENST00000505555 HAUS7Q99871 368 aa23.36■■□□□ 1.33
SDHA-206ENST00000505555 RBSNQ9H1K0 784 aa23.36■■□□□ 1.33
SDHA-206ENST00000505555 MBD3O95983 291 aa23.35■■□□□ 1.33
SDHA-206ENST00000505555 ZSCAN31Q96LW9 406 aaPredicted RBP23.35■■□□□ 1.33
SDHA-206ENST00000505555 SHANK3Q9BYB0 1731 aa23.35■■□□□ 1.33
SDHA-206ENST00000505555 PSMA5P28066 241 aa23.35■■□□□ 1.33
SDHA-206ENST00000505555 RNF20Q5VTR2 975 aa23.35■■□□□ 1.33
SDHA-206ENST00000505555 BTG4Q9NY30 223 aa23.35■■□□□ 1.33
SDHA-206ENST00000505555 TNS2Q63HR2 1409 aa23.34■■□□□ 1.33
SDHA-206ENST00000505555 ABCA3Q99758 1704 aa23.34■■□□□ 1.33
SDHA-206ENST00000505555 SLFNL1Q499Z3 407 aa23.34■■□□□ 1.33
SDHA-206ENST00000505555 PIGBQ92521 554 aa23.34■■□□□ 1.33
SDHA-206ENST00000505555 SH2B1Q9NRF2 756 aaPredicted RBP23.34■■□□□ 1.33
SDHA-206ENST00000505555 CNPY2Q9Y2B0 182 aa23.34■■□□□ 1.33
SDHA-206ENST00000505555 TPRNQ4KMQ1 711 aa23.33■■□□□ 1.33
SDHA-206ENST00000505555 BLOC1S2Q6QNY1 142 aa23.33■■□□□ 1.33
SDHA-206ENST00000505555 DNAJC10Q8IXB1 793 aa23.33■■□□□ 1.33
SDHA-206ENST00000505555 NUP188Q5SRE5 1749 aa23.33■■□□□ 1.33
SDHA-206ENST00000505555 ZNF609O15014 1411 aa23.33■■□□□ 1.33
SDHA-206ENST00000505555 PUS3Q9BZE2 481 aaKnown RBP23.33■■□□□ 1.33
SDHA-206ENST00000505555 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.32■■□□□ 1.32
SDHA-206ENST00000505555 PAPPAQ13219 1627 aa23.32■■□□□ 1.32
SDHA-206ENST00000505555 GOLIM4O00461 696 aa23.31■■□□□ 1.32
SDHA-206ENST00000505555 RPS6KB1P23443 525 aa23.31■■□□□ 1.32
SDHA-206ENST00000505555 IL15P40933 162 aaPredicted RBP23.31■■□□□ 1.32
SDHA-206ENST00000505555 CCDC85AQ96PX6 553 aaPredicted RBP23.31■■□□□ 1.32
SDHA-206ENST00000505555 JCADQ9P266 1359 aa23.31■■□□□ 1.32
SDHA-206ENST00000505555 EYA2O00167 538 aa23.31■■□□□ 1.32
SDHA-206ENST00000505555 F13A1P00488 732 aa23.31■■□□□ 1.32
SDHA-206ENST00000505555 TCIRG1Q13488 830 aa23.31■■□□□ 1.32
SDHA-206ENST00000505555 LRSAM1Q6UWE0 723 aa23.31■■□□□ 1.32
SDHA-206ENST00000505555 ISCA1Q9BUE6 129 aa23.31■■□□□ 1.32
SDHA-206ENST00000505555 TJP1Q07157 1748 aa23.3■■□□□ 1.32
SDHA-206ENST00000505555 MCMDC2Q4G0Z9 681 aa23.3■■□□□ 1.32
SDHA-206ENST00000505555 USPL1Q5W0Q7 1092 aa23.3■■□□□ 1.32
SDHA-206ENST00000505555 ATG3Q9NT62 314 aa23.3■■□□□ 1.32
SDHA-206ENST00000505555 TOGARAM1Q9Y4F4 1720 aa23.3■■□□□ 1.32
SDHA-206ENST00000505555 KBTBD3Q8NAB2 608 aa23.29■■□□□ 1.32
SDHA-206ENST00000505555 TRIM44Q96DX7 344 aaPredicted RBP23.29■■□□□ 1.32
SDHA-206ENST00000505555 TOB2Q14106 344 aaPredicted RBP23.29■■□□□ 1.32
SDHA-206ENST00000505555 FAM89AQ96GI7 184 aa23.29■■□□□ 1.32
SDHA-206ENST00000505555 HMG20BQ9P0W2 317 aa23.29■■□□□ 1.32
SDHA-206ENST00000505555 MTMR6Q9Y217 621 aa23.29■■□□□ 1.32
SDHA-206ENST00000505555 PAG1Q9NWQ8 432 aa23.28■■□□□ 1.32
SDHA-206ENST00000505555 CLCN1P35523 988 aa23.28■■□□□ 1.32
SDHA-206ENST00000505555 CCDC173Q0VFZ6 552 aa23.28■■□□□ 1.32
SDHA-206ENST00000505555 TSGA10IPQ3SY00 556 aa23.28■■□□□ 1.32
SDHA-206ENST00000505555 A0A1B0GUL7 405 aa23.27■■□□□ 1.32
SDHA-206ENST00000505555 VPS37CA5D8V6 355 aaPredicted RBP23.27■■□□□ 1.32
SDHA-206ENST00000505555 STK3Q13188 491 aa23.27■■□□□ 1.32
SDHA-206ENST00000505555 ANP32BQ92688 251 aaKnown RBP23.27■■□□□ 1.32
SDHA-206ENST00000505555 GPR108Q9NPR9 543 aa23.27■■□□□ 1.32
SDHA-206ENST00000505555 TCHHQ07283 1943 aa23.27■■□□□ 1.32
SDHA-206ENST00000505555 SYNE4Q8N205 404 aa23.27■■□□□ 1.31
SDHA-206ENST00000505555 PPP1R9BQ96SB3 815 aa23.27■■□□□ 1.31
SDHA-206ENST00000505555 FIBPO43427 364 aa23.25■■□□□ 1.31
SDHA-206ENST00000505555 CYP21A2P08686 494 aa23.25■■□□□ 1.31
SDHA-206ENST00000505555 CCDC57Q2TAC2 916 aa23.25■■□□□ 1.31
SDHA-206ENST00000505555 KIF6Q6ZMV9 814 aa23.25■■□□□ 1.31
SDHA-206ENST00000505555 TMEM87AQ8NBN3 555 aa23.25■■□□□ 1.31
SDHA-206ENST00000505555 DNM1Q05193 864 aaKnown RBP23.25■■□□□ 1.31
SDHA-206ENST00000505555 ANKRD1Q15327 319 aa23.25■■□□□ 1.31
SDHA-206ENST00000505555 NEK1Q96PY6 1258 aa23.25■■□□□ 1.31
SDHA-206ENST00000505555 U3KPZ7 1027 aaPredicted RBP23.25■■□□□ 1.31
SDHA-206ENST00000505555 RFX7Q2KHR2 1363 aa23.25■■□□□ 1.31
SDHA-206ENST00000505555 CIAO1O76071 339 aa23.24■■□□□ 1.31
SDHA-206ENST00000505555 IFIT1P09914 478 aaKnown RBP23.24■■□□□ 1.31
SDHA-206ENST00000505555 LARP1BQ659C4 914 aaKnown RBP23.24■■□□□ 1.31
SDHA-206ENST00000505555 ESPNB1AK53 854 aa23.24■■□□□ 1.31
SDHA-206ENST00000505555 STARD3NLO95772 234 aa23.24■■□□□ 1.31
SDHA-206ENST00000505555 HLFQ16534 295 aa23.24■■□□□ 1.31
SDHA-206ENST00000505555 RNF214Q8ND24 703 aa23.24■■□□□ 1.31
SDHA-206ENST00000505555 TEX13AQ9BXU3 409 aaPredicted RBP23.24■■□□□ 1.31
SDHA-206ENST00000505555 ALDH8A1Q9H2A2 487 aaPredicted RBP23.24■■□□□ 1.31
SDHA-206ENST00000505555 CEP126Q9P2H0 1117 aa23.24■■□□□ 1.31
SDHA-206ENST00000505555 GPTP24298 496 aa23.23■■□□□ 1.31
SDHA-206ENST00000505555 VSIG10Q8N0Z9 540 aa23.23■■□□□ 1.31
SDHA-206ENST00000505555 SLC4A9Q96Q91 983 aa23.23■■□□□ 1.31
SDHA-206ENST00000505555 ATP6V1DQ9Y5K8 247 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms