RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 CCDC144CPQ8IYA2 1237 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 DNAJC25Q9H1X3 360 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 HEG1Q9ULI3 1381 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 TAF5LO75529 589 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 IGKV5-2P06315 115 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 NAA30Q147X3 362 aaPredicted RBP14.09□□□□□ -0.15
UBE3D-206ENST00000505226 EPHA10Q5JZY3 1008 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 ZSCAN25Q6NSZ9 544 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 PDCL2Q8N4E4 241 aa14.09□□□□□ -0.15
UBE3D-206ENST00000505226 C16orf45Q96MC5 204 aaPredicted RBP14.09□□□□□ -0.15
UBE3D-206ENST00000505226 SCAND2PQ9GZW5 306 aaPredicted RBP14.09□□□□□ -0.15
UBE3D-206ENST00000505226 ANKARQ7Z5J8 1434 aa14.08□□□□□ -0.15
UBE3D-206ENST00000505226 UTYO14607 1347 aa14.08□□□□□ -0.16
UBE3D-206ENST00000505226 NPHP3Q7Z494 1330 aa14.08□□□□□ -0.16
UBE3D-206ENST00000505226 PDCP20941 246 aa14.08□□□□□ -0.16
UBE3D-206ENST00000505226 G3BP1Q13283 466 aaKnown RBP eCLIP14.08□□□□□ -0.16
UBE3D-206ENST00000505226 PDIA6Q15084 440 aa14.08□□□□□ -0.16
UBE3D-206ENST00000505226 ALDH8A1Q9H2A2 487 aaPredicted RBP14.08□□□□□ -0.16
UBE3D-206ENST00000505226 NFAT5O94916 1531 aa14.08□□□□□ -0.16
UBE3D-206ENST00000505226 ARHGAP23Q9P227 1491 aa14.08□□□□□ -0.16
UBE3D-206ENST00000505226 CACTINQ8WUQ7 758 aaKnown RBP14.08□□□□□ -0.16
UBE3D-206ENST00000505226 TRIM5Q9C035 493 aa14.08□□□□□ -0.16
UBE3D-206ENST00000505226 LMO7Q8WWI1 1683 aa14.08□□□□□ -0.16
UBE3D-206ENST00000505226 JCADQ9P266 1359 aa14.08□□□□□ -0.16
UBE3D-206ENST00000505226 SLIT1O75093 1534 aa14.07□□□□□ -0.16
UBE3D-206ENST00000505226 LINS1Q8NG48 757 aa14.07□□□□□ -0.16
UBE3D-206ENST00000505226 TDRD7Q8NHU6 1098 aaKnown RBP14.07□□□□□ -0.16
UBE3D-206ENST00000505226 NCBP1Q09161 790 aaKnown RBP14.07□□□□□ -0.16
UBE3D-206ENST00000505226 RESTQ13127 1097 aa14.07□□□□□ -0.16
UBE3D-206ENST00000505226 TSGA10IPQ3SY00 556 aa14.07□□□□□ -0.16
UBE3D-206ENST00000505226 A0A087WWV3 80 aa14.07□□□□□ -0.16
UBE3D-206ENST00000505226 HIP1O00291 1037 aa14.07□□□□□ -0.16
UBE3D-206ENST00000505226 ZNF165P49910 485 aa14.07□□□□□ -0.16
UBE3D-206ENST00000505226 ARID5BQ14865 1188 aa14.07□□□□□ -0.16
UBE3D-206ENST00000505226 CCDC129Q6ZRS4 1044 aa14.07□□□□□ -0.16
UBE3D-206ENST00000505226 DRC7Q8IY82 874 aa14.07□□□□□ -0.16
UBE3D-206ENST00000505226 DDX19AQ9NUU7 478 aaKnown RBP14.07□□□□□ -0.16
UBE3D-206ENST00000505226 ADGRL3Q9HAR2 1447 aa14.06□□□□□ -0.16
UBE3D-206ENST00000505226 GOLGA6L4A6NEF3 574 aa14.06□□□□□ -0.16
UBE3D-206ENST00000505226 ANKRD1Q15327 319 aa14.06□□□□□ -0.16
UBE3D-206ENST00000505226 BRF1Q92994 677 aa14.06□□□□□ -0.16
UBE3D-206ENST00000505226 SEC62Q99442 399 aaKnown RBP14.06□□□□□ -0.16
UBE3D-206ENST00000505226 FTOQ9C0B1 505 aaKnown RBP eCLIP14.06□□□□□ -0.16
UBE3D-206ENST00000505226 CHAF1AQ13111 956 aaPredicted RBP14.06□□□□□ -0.16
UBE3D-206ENST00000505226 USPL1Q5W0Q7 1092 aa14.06□□□□□ -0.16
UBE3D-206ENST00000505226 GTF3C6Q969F1 213 aa14.06□□□□□ -0.16
UBE3D-206ENST00000505226 LRRC2Q9BYS8 371 aa14.06□□□□□ -0.16
UBE3D-206ENST00000505226 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.05□□□□□ -0.16
UBE3D-206ENST00000505226 RNF20Q5VTR2 975 aa14.05□□□□□ -0.16
UBE3D-206ENST00000505226 ADD1P35611 737 aaKnown RBP14.05□□□□□ -0.16
UBE3D-206ENST00000505226 CEBPZQ03701 1054 aaKnown RBP14.05□□□□□ -0.16
UBE3D-206ENST00000505226 UTP14CQ5TAP6 766 aaKnown RBP14.05□□□□□ -0.16
UBE3D-206ENST00000505226 C11orf57Q6ZUT1 292 aaPredicted RBP14.05□□□□□ -0.16
UBE3D-206ENST00000505226 BICD2Q8TD16 824 aa14.05□□□□□ -0.16
UBE3D-206ENST00000505226 PHF8Q9UPP1 1060 aa14.05□□□□□ -0.16
UBE3D-206ENST00000505226 PLEKHO1Q53GL0 409 aaPredicted RBP14.05□□□□□ -0.16
UBE3D-206ENST00000505226 IQCB1Q15051 598 aa14.04□□□□□ -0.16
UBE3D-206ENST00000505226 Q6ZUG5 572 aa14.04□□□□□ -0.16
UBE3D-206ENST00000505226 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
UBE3D-206ENST00000505226 DBNLQ9UJU6 430 aaKnown RBP14.04□□□□□ -0.16
UBE3D-206ENST00000505226 USP16Q9Y5T5 823 aa14.04□□□□□ -0.16
UBE3D-206ENST00000505226 USP27XA6NNY8 438 aa14.04□□□□□ -0.16
UBE3D-206ENST00000505226 CLIP2Q9UDT6 1046 aa14.04□□□□□ -0.16
UBE3D-206ENST00000505226 CYP21A2P08686 494 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 PDIA4P13667 645 aaKnown RBP14.03□□□□□ -0.16
UBE3D-206ENST00000505226 TNNT1P13805 278 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 SCRN1Q12765 414 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 SLFNL1Q499Z3 407 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 CHMP4AQ9BY43 222 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 NEK1Q96PY6 1258 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 GOLPH3LQ9H4A5 285 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 HMG20BQ9P0W2 317 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 ZNF609O15014 1411 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 PPFIA3O75145 1194 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 FOSBP53539 338 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 STOX1Q6ZVD7 989 aa14.03□□□□□ -0.16
UBE3D-206ENST00000505226 DDX21Q9NR30 783 aaKnown RBP eCLIP14.03□□□□□ -0.16
UBE3D-206ENST00000505226 KIF13AQ9H1H9 1805 aa14.02□□□□□ -0.16
UBE3D-206ENST00000505226 IGSF3O75054 1194 aa14.02□□□□□ -0.16
UBE3D-206ENST00000505226 SLC39A6Q13433 755 aa14.02□□□□□ -0.16
UBE3D-206ENST00000505226 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.02□□□□□ -0.16
UBE3D-206ENST00000505226 NEURL1BA8MQ27 555 aa14.02□□□□□ -0.17
UBE3D-206ENST00000505226 C1orf141Q5JVX7 400 aa14.02□□□□□ -0.17
UBE3D-206ENST00000505226 MRC1P22897 1456 aa14.02□□□□□ -0.17
UBE3D-206ENST00000505226 A0A0G2JLW4 131 aa14.02□□□□□ -0.17
UBE3D-206ENST00000505226 CTDNEP1O95476 244 aa14.02□□□□□ -0.17
UBE3D-206ENST00000505226 MYL6BP14649 208 aa14.02□□□□□ -0.17
UBE3D-206ENST00000505226 SMTNL1A8MU46 457 aa14.01□□□□□ -0.17
UBE3D-206ENST00000505226 TFCP2Q12800 502 aa14.01□□□□□ -0.17
UBE3D-206ENST00000505226 SNW1Q13573 536 aaKnown RBP14.01□□□□□ -0.17
UBE3D-206ENST00000505226 ERCC4Q92889 916 aaPredicted RBP14.01□□□□□ -0.17
UBE3D-206ENST00000505226 RFX5P48382 616 aaPredicted RBP14.01□□□□□ -0.17
UBE3D-206ENST00000505226 PIP4K2AP48426 406 aaPredicted RBP14.01□□□□□ -0.17
UBE3D-206ENST00000505226 GCKRQ14397 625 aa14.01□□□□□ -0.17
UBE3D-206ENST00000505226 RIC3Q7Z5B4 369 aa14.01□□□□□ -0.17
UBE3D-206ENST00000505226 LRRC8AQ8IWT6 810 aa14.01□□□□□ -0.17
UBE3D-206ENST00000505226 AXIN2Q9Y2T1 843 aa14.01□□□□□ -0.17
UBE3D-206ENST00000505226 ATP5JP18859 108 aa14□□□□□ -0.17
UBE3D-206ENST00000505226 AMOTQ4VCS5 1084 aa14□□□□□ -0.17
UBE3D-206ENST00000505226 PTPN12Q05209 780 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms