RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 SIRT2Q8IXJ6 389 aa10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 VGLL2Q8N8G2 317 aa10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 SCN4AP35499 1836 aa10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 SSH3Q8TE77 659 aa10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 ARXQ96QS3 562 aa10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 NOP58Q9Y2X3 529 aaKnown RBP10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 NEXNQ0ZGT2 675 aa10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 C15orf52Q6ZUT6 534 aaKnown RBP10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 SYNE4Q8N205 404 aa10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 CNBD1Q8NA66 436 aa10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 MEIS3Q99687 375 aa10.49□□□□□ -0.73
CDC42SE2-208ENST00000505065 ZBTB7AO95365 584 aa10.48□□□□□ -0.73
CDC42SE2-208ENST00000505065 DDX19BQ9UMR2 479 aa10.48□□□□□ -0.73
CDC42SE2-208ENST00000505065 PDE6BP35913 854 aa10.48□□□□□ -0.73
CDC42SE2-208ENST00000505065 PODXL2Q9NZ53 605 aa10.48□□□□□ -0.73
CDC42SE2-208ENST00000505065 AK9Q5TCS8 1911 aa10.48□□□□□ -0.73
CDC42SE2-208ENST00000505065 ATP5J2-PTCD1G3V325 749 aa10.48□□□□□ -0.73
CDC42SE2-208ENST00000505065 TMC4Q7Z404 712 aa10.48□□□□□ -0.73
CDC42SE2-208ENST00000505065 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 CIAO1O76071 339 aa10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 GNAI3P08754 354 aa10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 HSP90B1P14625 803 aaKnown RBP10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 NPR1P16066 1061 aa10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 IRS4O14654 1257 aaPredicted RBP10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 ST5P78524 1137 aa10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 ERICH6BQ5W0A0 696 aa10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 PANK1Q8TE04 598 aa10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 COPRSQ9NQ92 184 aa10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 GRIPAP1Q4V328 841 aa10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 CEP85Q6P2H3 762 aa10.47□□□□□ -0.73
CDC42SE2-208ENST00000505065 MSL1Q68DK7 614 aa10.46□□□□□ -0.73
CDC42SE2-208ENST00000505065 NBPF5PQ86XG9 351 aaPredicted RBP10.46□□□□□ -0.73
CDC42SE2-208ENST00000505065 MASTLQ96GX5 879 aa10.46□□□□□ -0.73
CDC42SE2-208ENST00000505065 FAM89AQ96GI7 184 aa10.46□□□□□ -0.74
CDC42SE2-208ENST00000505065 POLD1P28340 1107 aa10.46□□□□□ -0.74
CDC42SE2-208ENST00000505065 ATP8B2P98198 1209 aa10.46□□□□□ -0.74
CDC42SE2-208ENST00000505065 HDAC1Q13547 482 aaPredicted RBP10.46□□□□□ -0.74
CDC42SE2-208ENST00000505065 VPS33BQ9H267 617 aa10.46□□□□□ -0.74
CDC42SE2-208ENST00000505065 BICC1Q9H694 974 aaKnown RBP10.46□□□□□ -0.74
CDC42SE2-208ENST00000505065 GPTP24298 496 aa10.45□□□□□ -0.74
CDC42SE2-208ENST00000505065 YTHDC1Q96MU7 727 aaKnown RBP10.45□□□□□ -0.74
CDC42SE2-208ENST00000505065 PLIN1O60240 522 aa10.45□□□□□ -0.74
CDC42SE2-208ENST00000505065 GRAPQ13588 217 aa10.45□□□□□ -0.74
CDC42SE2-208ENST00000505065 GRAPLQ8TC17 118 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE2-208ENST00000505065 TRMT112Q9UI30 125 aaKnown RBP10.45□□□□□ -0.74
CDC42SE2-208ENST00000505065 KDM2BQ8NHM5 1336 aa10.45□□□□□ -0.74
CDC42SE2-208ENST00000505065 PTPN12Q05209 780 aaKnown RBP10.45□□□□□ -0.74
CDC42SE2-208ENST00000505065 ATG9AQ7Z3C6 839 aa10.45□□□□□ -0.74
CDC42SE2-208ENST00000505065 RIPOR2Q9Y4F9 1068 aa10.45□□□□□ -0.74
CDC42SE2-208ENST00000505065 NUTM1Q86Y26 1132 aa10.44□□□□□ -0.74
CDC42SE2-208ENST00000505065 UBE3BQ7Z3V4 1068 aa10.44□□□□□ -0.74
CDC42SE2-208ENST00000505065 SALL3Q9BXA9 1300 aa10.44□□□□□ -0.74
CDC42SE2-208ENST00000505065 SYT17Q9BSW7 474 aa10.44□□□□□ -0.74
CDC42SE2-208ENST00000505065 CHMP4BQ9H444 224 aaKnown RBP10.44□□□□□ -0.74
CDC42SE2-208ENST00000505065 BSDC1Q9NW68 430 aaPredicted RBP10.44□□□□□ -0.74
CDC42SE2-208ENST00000505065 ATF5Q9Y2D1 282 aaPredicted RBP10.44□□□□□ -0.74
CDC42SE2-208ENST00000505065 NLGN2Q8NFZ4 835 aa10.44□□□□□ -0.74
CDC42SE2-208ENST00000505065 FGFR2P21802 821 aa10.43□□□□□ -0.74
CDC42SE2-208ENST00000505065 RPAP2Q8IXW5 612 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE2-208ENST00000505065 SP8Q8IXZ3 490 aa10.43□□□□□ -0.74
CDC42SE2-208ENST00000505065 HDAC5Q9UQL6 1122 aa10.43□□□□□ -0.74
CDC42SE2-208ENST00000505065 GNAI2P04899 355 aa10.43□□□□□ -0.74
CDC42SE2-208ENST00000505065 FHDC1Q9C0D6 1143 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE2-208ENST00000505065 GREM2Q9H772 168 aa10.43□□□□□ -0.74
CDC42SE2-208ENST00000505065 DPEP1P16444 411 aa10.43□□□□□ -0.74
CDC42SE2-208ENST00000505065 PSMD1Q99460 953 aa10.43□□□□□ -0.74
CDC42SE2-208ENST00000505065 ATP6V0A2Q9Y487 856 aa10.43□□□□□ -0.74
CDC42SE2-208ENST00000505065 BBOX1O75936 387 aa10.42□□□□□ -0.74
CDC42SE2-208ENST00000505065 LAMA4Q16363 1823 aa10.42□□□□□ -0.74
CDC42SE2-208ENST00000505065 CCDC152Q4G0S7 254 aa10.42□□□□□ -0.74
CDC42SE2-208ENST00000505065 CRBNQ96SW2 442 aa10.42□□□□□ -0.74
CDC42SE2-208ENST00000505065 GPR108Q9NPR9 543 aa10.42□□□□□ -0.74
CDC42SE2-208ENST00000505065 LRRFIP2Q9Y608 721 aaKnown RBP10.42□□□□□ -0.74
CDC42SE2-208ENST00000505065 RBM17Q96I25 401 aaKnown RBP10.42□□□□□ -0.74
CDC42SE2-208ENST00000505065 PNMA6EA0A0J9YXQ4 647 aa10.42□□□□□ -0.74
CDC42SE2-208ENST00000505065 NLRP3Q96P20 1036 aa10.42□□□□□ -0.74
CDC42SE2-208ENST00000505065 SUPT16HQ9Y5B9 1047 aaKnown RBP10.42□□□□□ -0.74
CDC42SE2-208ENST00000505065 PCDHB15Q9Y5E8 787 aa10.42□□□□□ -0.74
CDC42SE2-208ENST00000505065 MED23Q9ULK4 1368 aa10.41□□□□□ -0.74
CDC42SE2-208ENST00000505065 UBTFL1P0CB47 393 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE2-208ENST00000505065 HCLS1P14317 486 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE2-208ENST00000505065 PRELPP51888 382 aa10.41□□□□□ -0.74
CDC42SE2-208ENST00000505065 ALDH1B1P30837 517 aa10.41□□□□□ -0.74
CDC42SE2-208ENST00000505065 CC2D2BQ6DHV5 1058 aa10.41□□□□□ -0.74
CDC42SE2-208ENST00000505065 CLUAP1Q96AJ1 413 aa10.41□□□□□ -0.74
CDC42SE2-208ENST00000505065 PDS5AQ29RF7 1337 aaKnown RBP10.41□□□□□ -0.74
CDC42SE2-208ENST00000505065 FRAT1Q92837 279 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE2-208ENST00000505065 COG6Q9Y2V7 657 aa10.41□□□□□ -0.74
CDC42SE2-208ENST00000505065 COL1A1P02452 1464 aaPredicted RBP10.41□□□□□ -0.74
CDC42SE2-208ENST00000505065 ZNF804BA4D1E1 1349 aa10.4□□□□□ -0.74
CDC42SE2-208ENST00000505065 C2CD5Q86YS7 1000 aa10.4□□□□□ -0.74
CDC42SE2-208ENST00000505065 CNKSR1Q969H4 720 aa10.4□□□□□ -0.74
CDC42SE2-208ENST00000505065 FAM161AQ3B820 660 aa10.4□□□□□ -0.74
CDC42SE2-208ENST00000505065 CELF1Q92879 486 aaKnown RBP10.4□□□□□ -0.74
CDC42SE2-208ENST00000505065 DCTPP1Q9H773 170 aa10.4□□□□□ -0.74
CDC42SE2-208ENST00000505065 SIPA1L1O43166 1804 aa10.4□□□□□ -0.75
CDC42SE2-208ENST00000505065 ZC3H4Q9UPT8 1303 aaKnown RBP10.4□□□□□ -0.75
CDC42SE2-208ENST00000505065 ITGA6P23229 1130 aa10.4□□□□□ -0.75
CDC42SE2-208ENST00000505065 SMC5Q8IY18 1101 aa10.4□□□□□ -0.75
CDC42SE2-208ENST00000505065 MROH5Q6ZUA9 1318 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms