RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 CT47B1P0C2W7 299 aaPredicted RBP21.53■■□□□ 1.04
SYNE4-207ENST00000505054 KSR2Q6VAB6 950 aa21.53■■□□□ 1.04
SYNE4-207ENST00000505054 PNMA8AQ86V59 439 aaPredicted RBP21.53■■□□□ 1.04
SYNE4-207ENST00000505054 GPC2Q8N158 579 aa21.53■■□□□ 1.04
SYNE4-207ENST00000505054 SYNE4Q8N205 404 aa21.53■■□□□ 1.04
SYNE4-207ENST00000505054 PI4KAP1Q8N8J0 262 aa21.53■■□□□ 1.04
SYNE4-207ENST00000505054 ZNF428Q96B54 188 aa21.53■■□□□ 1.04
SYNE4-207ENST00000505054 MAP3K2Q9Y2U5 619 aa21.53■■□□□ 1.04
SYNE4-207ENST00000505054 COL4A5P29400 1685 aa21.53■■□□□ 1.04
SYNE4-207ENST00000505054 ATP5J2-PTCD1G3V325 749 aa21.52■■□□□ 1.04
SYNE4-207ENST00000505054 MRPL50Q8N5N7 158 aaKnown RBP21.52■■□□□ 1.04
SYNE4-207ENST00000505054 LTBP1Q14766 1721 aa21.52■■□□□ 1.03
SYNE4-207ENST00000505054 FOXN1O15353 648 aa21.51■■□□□ 1.03
SYNE4-207ENST00000505054 FKBP5Q13451 457 aaPredicted RBP21.51■■□□□ 1.03
SYNE4-207ENST00000505054 CC2D2BQ6DHV5 1058 aa21.51■■□□□ 1.03
SYNE4-207ENST00000505054 NUTM1Q86Y26 1132 aa21.51■■□□□ 1.03
SYNE4-207ENST00000505054 MYD88Q99836 296 aa21.51■■□□□ 1.03
SYNE4-207ENST00000505054 METTL22Q9BUU2 404 aaPredicted RBP21.51■■□□□ 1.03
SYNE4-207ENST00000505054 BCL2L13Q9BXK5 485 aa21.51■■□□□ 1.03
SYNE4-207ENST00000505054 CLEC11AQ9Y240 323 aa21.51■■□□□ 1.03
SYNE4-207ENST00000505054 TRIM28Q13263 835 aaKnown RBP21.5■■□□□ 1.03
SYNE4-207ENST00000505054 ALDH1L2Q3SY69 923 aa21.5■■□□□ 1.03
SYNE4-207ENST00000505054 JDP2Q8WYK2 163 aa21.5■■□□□ 1.03
SYNE4-207ENST00000505054 THSD7BQ9C0I4 1608 aa21.5■■□□□ 1.03
SYNE4-207ENST00000505054 CACNA1FO60840 1977 aa21.5■■□□□ 1.03
SYNE4-207ENST00000505054 VEGFBP49765 207 aa21.49■■□□□ 1.03
SYNE4-207ENST00000505054 PPP1R42Q7Z4L9 355 aa21.49■■□□□ 1.03
SYNE4-207ENST00000505054 RPGRQ92834 1020 aaKnown RBP21.49■■□□□ 1.03
SYNE4-207ENST00000505054 AIDAQ96BJ3 306 aa21.49■■□□□ 1.03
SYNE4-207ENST00000505054 UTP14AQ9BVJ6 771 aaKnown RBP21.49■■□□□ 1.03
SYNE4-207ENST00000505054 PRDM10Q9NQV6 1147 aa21.49■■□□□ 1.03
SYNE4-207ENST00000505054 TRPM7Q96QT4 1865 aa21.49■■□□□ 1.03
SYNE4-207ENST00000505054 IGKV5-2P06315 115 aa21.48■■□□□ 1.03
SYNE4-207ENST00000505054 GRIPAP1Q4V328 841 aa21.48■■□□□ 1.03
SYNE4-207ENST00000505054 SMC4Q9NTJ3 1288 aa21.48■■□□□ 1.03
SYNE4-207ENST00000505054 RASSF10A6NK89 507 aa21.47■■□□□ 1.03
SYNE4-207ENST00000505054 HOXA10P31260 410 aaPredicted RBP21.47■■□□□ 1.03
SYNE4-207ENST00000505054 RARSP54136 660 aaKnown RBP21.47■■□□□ 1.03
SYNE4-207ENST00000505054 EIF6P56537 245 aaKnown RBP21.47■■□□□ 1.03
SYNE4-207ENST00000505054 CNTROBQ8N137 903 aa21.47■■□□□ 1.03
SYNE4-207ENST00000505054 DNAAF4Q8WXU2 420 aa21.47■■□□□ 1.03
SYNE4-207ENST00000505054 F6X3S4 739 aa21.46■■□□□ 1.03
SYNE4-207ENST00000505054 CTCFP49711 727 aaPredicted RBP21.46■■□□□ 1.03
SYNE4-207ENST00000505054 MAP1SQ66K74 1059 aaPredicted RBP21.46■■□□□ 1.03
SYNE4-207ENST00000505054 TRMT112Q9UI30 125 aaKnown RBP21.46■■□□□ 1.03
SYNE4-207ENST00000505054 LAMB2P55268 1798 aa21.46■■□□□ 1.03
SYNE4-207ENST00000505054 LMOD1P29536 600 aaPredicted RBP21.45■■□□□ 1.02
SYNE4-207ENST00000505054 PPEF1O14829 653 aaPredicted RBP21.44■■□□□ 1.02
SYNE4-207ENST00000505054 NEXNQ0ZGT2 675 aa21.44■■□□□ 1.02
SYNE4-207ENST00000505054 CWF19L2Q2TBE0 894 aaKnown RBP21.44■■□□□ 1.02
SYNE4-207ENST00000505054 CCDC191Q8NCU4 936 aa21.44■■□□□ 1.02
SYNE4-207ENST00000505054 RBM17Q96I25 401 aaKnown RBP21.44■■□□□ 1.02
SYNE4-207ENST00000505054 CRAMP1Q96RY5 1269 aa21.44■■□□□ 1.02
SYNE4-207ENST00000505054 WBP1LQ9NX94 342 aa21.44■■□□□ 1.02
SYNE4-207ENST00000505054 GJA3Q9Y6H8 435 aa21.44■■□□□ 1.02
SYNE4-207ENST00000505054 SH3TC1Q8TE82 1336 aa21.44■■□□□ 1.02
SYNE4-207ENST00000505054 NEURL1BA8MQ27 555 aa21.43■■□□□ 1.02
SYNE4-207ENST00000505054 BRPF1P55201 1214 aaPredicted RBP21.43■■□□□ 1.02
SYNE4-207ENST00000505054 SLC10A5Q5PT55 438 aa21.43■■□□□ 1.02
SYNE4-207ENST00000505054 C3orf67Q6ZVT6 689 aa21.43■■□□□ 1.02
SYNE4-207ENST00000505054 LARGE2Q8N3Y3 721 aa21.43■■□□□ 1.02
SYNE4-207ENST00000505054 FAM89AQ96GI7 184 aa21.43■■□□□ 1.02
SYNE4-207ENST00000505054 CWC25Q9NXE8 425 aaPredicted RBP21.43■■□□□ 1.02
SYNE4-207ENST00000505054 PTPRCP08575 1304 aa21.43■■□□□ 1.02
SYNE4-207ENST00000505054 SCNN1DP51172 638 aa21.42■■□□□ 1.02
SYNE4-207ENST00000505054 DEFB115Q30KQ5 88 aa21.42■■□□□ 1.02
SYNE4-207ENST00000505054 YTHDC1Q96MU7 727 aaKnown RBP21.42■■□□□ 1.02
SYNE4-207ENST00000505054 HCLS1P14317 486 aaPredicted RBP21.41■■□□□ 1.02
SYNE4-207ENST00000505054 BEND3Q5T5X7 828 aa21.41■■□□□ 1.02
SYNE4-207ENST00000505054 ZBTB38Q8NAP3 1195 aaPredicted RBP21.41■■□□□ 1.02
SYNE4-207ENST00000505054 LINS1Q8NG48 757 aa21.41■■□□□ 1.02
SYNE4-207ENST00000505054 ABT1Q9ULW3 272 aaKnown RBP21.41■■□□□ 1.02
SYNE4-207ENST00000505054 WDR33Q9C0J8 1336 aaKnown RBP21.4■■□□□ 1.02
SYNE4-207ENST00000505054 PCCAP05165 728 aaPredicted RBP21.4■■□□□ 1.02
SYNE4-207ENST00000505054 RTL5Q5HYW3 569 aaPredicted RBP21.4■■□□□ 1.02
SYNE4-207ENST00000505054 NIM1KQ8IY84 436 aa21.4■■□□□ 1.02
SYNE4-207ENST00000505054 DDX60Q8IY21 1712 aaKnown RBP21.39■■□□□ 1.01
SYNE4-207ENST00000505054 BCAR3O75815 825 aa21.39■■□□□ 1.01
SYNE4-207ENST00000505054 SLC51AQ86UW1 340 aa21.39■■□□□ 1.01
SYNE4-207ENST00000505054 JARID2Q92833 1246 aaPredicted RBP21.39■■□□□ 1.01
SYNE4-207ENST00000505054 NOB1Q9ULX3 412 aaKnown RBP21.39■■□□□ 1.01
SYNE4-207ENST00000505054 EPS15P42566 896 aa21.38■■□□□ 1.01
SYNE4-207ENST00000505054 LBX1P52954 281 aa21.38■■□□□ 1.01
SYNE4-207ENST00000505054 MAP2K1Q02750 393 aaPredicted RBP21.38■■□□□ 1.01
SYNE4-207ENST00000505054 GCKRQ14397 625 aa21.38■■□□□ 1.01
SYNE4-207ENST00000505054 USP50Q70EL3 339 aaPredicted RBP21.38■■□□□ 1.01
SYNE4-207ENST00000505054 KIF16BQ96L93 1317 aa21.37■■□□□ 1.01
SYNE4-207ENST00000505054 IRS4O14654 1257 aaPredicted RBP21.37■■□□□ 1.01
SYNE4-207ENST00000505054 PPIP5K2O43314 1243 aa21.37■■□□□ 1.01
SYNE4-207ENST00000505054 HSPA8P11142 646 aaKnown RBP21.37■■□□□ 1.01
SYNE4-207ENST00000505054 SLC4A10Q6U841 1118 aa21.37■■□□□ 1.01
SYNE4-207ENST00000505054 NLRP3Q96P20 1036 aa21.37■■□□□ 1.01
SYNE4-207ENST00000505054 TMX4Q9H1E5 349 aaPredicted RBP21.37■■□□□ 1.01
SYNE4-207ENST00000505054 VPS33BQ9H267 617 aa21.37■■□□□ 1.01
SYNE4-207ENST00000505054 ABCC4O15439 1325 aa21.36■■□□□ 1.01
SYNE4-207ENST00000505054 LRRC37AA6NMS7 1700 aa21.36■■□□□ 1.01
SYNE4-207ENST00000505054 ATP6V0A2Q9Y487 856 aa21.36■■□□□ 1.01
SYNE4-207ENST00000505054 CDHR2Q9BYE9 1310 aa21.35■■□□□ 1.01
SYNE4-207ENST00000505054 H7C1W4 665 aa21.35■■□□□ 1.01
SYNE4-207ENST00000505054 CASP7P55210 303 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms