RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 IL6STP40189 918 aaPredicted RBP11.45□□□□□ -0.58
CDH6-202ENST00000504835 TEFQ10587 303 aa11.45□□□□□ -0.58
CDH6-202ENST00000504835 CNGB1Q14028 1251 aaPredicted RBP11.45□□□□□ -0.58
CDH6-202ENST00000504835 GAS2L2Q8NHY3 880 aa11.45□□□□□ -0.58
CDH6-202ENST00000504835 BRIP1Q9BX63 1249 aa11.45□□□□□ -0.58
CDH6-202ENST00000504835 KDM3BQ7LBC6 1761 aa11.44□□□□□ -0.58
CDH6-202ENST00000504835 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
CDH6-202ENST00000504835 C21orf2O43822 256 aa11.44□□□□□ -0.58
CDH6-202ENST00000504835 ZNF622Q969S3 477 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDH6-202ENST00000504835 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
CDH6-202ENST00000504835 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
CDH6-202ENST00000504835 EVI5O60447 810 aa11.43□□□□□ -0.58
CDH6-202ENST00000504835 PIP4K2AP48426 406 aaPredicted RBP11.43□□□□□ -0.58
CDH6-202ENST00000504835 ANKK1Q8NFD2 765 aa11.43□□□□□ -0.58
CDH6-202ENST00000504835 FMNL2Q96PY5 1086 aa11.43□□□□□ -0.58
CDH6-202ENST00000504835 TEX13AQ9BXU3 409 aaPredicted RBP11.43□□□□□ -0.58
CDH6-202ENST00000504835 PDE4AP27815 886 aa11.42□□□□□ -0.58
CDH6-202ENST00000504835 PRKAR2BP31323 418 aa11.42□□□□□ -0.58
CDH6-202ENST00000504835 PDE6BP35913 854 aa11.42□□□□□ -0.58
CDH6-202ENST00000504835 ADAM33Q9BZ11 813 aa11.42□□□□□ -0.58
CDH6-202ENST00000504835 DAXXQ9UER7 740 aaPredicted RBP11.42□□□□□ -0.58
CDH6-202ENST00000504835 USP16Q9Y5T5 823 aa11.42□□□□□ -0.58
CDH6-202ENST00000504835 ADAMTSL1Q8N6G6 1762 aa11.42□□□□□ -0.58
CDH6-202ENST00000504835 LTBP3Q9NS15 1303 aa11.42□□□□□ -0.58
CDH6-202ENST00000504835 SRGNP10124 158 aa11.41□□□□□ -0.58
CDH6-202ENST00000504835 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
CDH6-202ENST00000504835 BTBD11A6QL63 1104 aa11.41□□□□□ -0.58
CDH6-202ENST00000504835 ITGBL1O95965 494 aaPredicted RBP11.41□□□□□ -0.58
CDH6-202ENST00000504835 ERFEQ4G0M1 354 aa11.41□□□□□ -0.58
CDH6-202ENST00000504835 DZIP3Q86Y13 1208 aaKnown RBP11.41□□□□□ -0.58
CDH6-202ENST00000504835 CNBD1Q8NA66 436 aa11.41□□□□□ -0.58
CDH6-202ENST00000504835 STYK1Q6J9G0 422 aa11.4□□□□□ -0.58
CDH6-202ENST00000504835 PRPF40BQ6NWY9 871 aaKnown RBP11.4□□□□□ -0.58
CDH6-202ENST00000504835 SETDB2Q96T68 719 aa11.4□□□□□ -0.58
CDH6-202ENST00000504835 TAOK3Q9H2K8 898 aa11.4□□□□□ -0.58
CDH6-202ENST00000504835 RABGEF1Q9UJ41 708 aa11.4□□□□□ -0.58
CDH6-202ENST00000504835 NBPF26B4DH59 902 aa11.39□□□□□ -0.59
CDH6-202ENST00000504835 PPP1R3GB7ZBB8 358 aa11.39□□□□□ -0.59
CDH6-202ENST00000504835 DDNO94850 711 aaPredicted RBP11.39□□□□□ -0.59
CDH6-202ENST00000504835 NBPF10Q6P3W6 841 aaKnown RBP11.39□□□□□ -0.59
CDH6-202ENST00000504835 MCM10Q7L590 875 aa11.39□□□□□ -0.59
CDH6-202ENST00000504835 NBPF15Q8N660 670 aa11.39□□□□□ -0.59
CDH6-202ENST00000504835 C7orf43Q8WVR3 580 aa11.39□□□□□ -0.59
CDH6-202ENST00000504835 HSPA1AP0DMV8 641 aaKnown RBP11.38□□□□□ -0.59
CDH6-202ENST00000504835 HSPA1BP0DMV9 641 aaKnown RBP11.38□□□□□ -0.59
CDH6-202ENST00000504835 ST5P78524 1137 aa11.38□□□□□ -0.59
CDH6-202ENST00000504835 DCTN1Q14203 1278 aa11.38□□□□□ -0.59
CDH6-202ENST00000504835 NYAP1Q6ZVC0 841 aa11.38□□□□□ -0.59
CDH6-202ENST00000504835 CNKSR1Q969H4 720 aa11.38□□□□□ -0.59
CDH6-202ENST00000504835 MASTLQ96GX5 879 aa11.38□□□□□ -0.59
CDH6-202ENST00000504835 SNED1Q8TER0 1413 aa11.38□□□□□ -0.59
CDH6-202ENST00000504835 OLFM4Q6UX06 510 aa11.37□□□□□ -0.59
CDH6-202ENST00000504835 LTBP1Q14766 1721 aa11.37□□□□□ -0.59
CDH6-202ENST00000504835 LAMB2P55268 1798 aa11.37□□□□□ -0.59
CDH6-202ENST00000504835 KLRG2A4D1S0 409 aaPredicted RBP11.37□□□□□ -0.59
CDH6-202ENST00000504835 PPP2R1AP30153 589 aa11.37□□□□□ -0.59
CDH6-202ENST00000504835 CLEC4GQ6UXB4 293 aa11.37□□□□□ -0.59
CDH6-202ENST00000504835 Q6ZNB5 142 aa11.37□□□□□ -0.59
CDH6-202ENST00000504835 COL4A5P29400 1685 aa11.36□□□□□ -0.59
CDH6-202ENST00000504835 SNRPA1P09661 255 aaKnown RBP11.36□□□□□ -0.59
CDH6-202ENST00000504835 MAP3K9P80192 1104 aa11.36□□□□□ -0.59
CDH6-202ENST00000504835 NBPF5PQ86XG9 351 aaPredicted RBP11.36□□□□□ -0.59
CDH6-202ENST00000504835 ZNF541Q9H0D2 1346 aa11.36□□□□□ -0.59
CDH6-202ENST00000504835 ANKRD36CQ5JPF3 1778 aa11.35□□□□□ -0.59
CDH6-202ENST00000504835 PASKQ96RG2 1323 aa11.35□□□□□ -0.59
CDH6-202ENST00000504835 NPHP1O15259 732 aa11.35□□□□□ -0.59
CDH6-202ENST00000504835 U2AF1L5P0DN76 240 aaPredicted RBP11.35□□□□□ -0.59
CDH6-202ENST00000504835 U2AF1Q01081 240 aaKnown RBP eCLIP11.35□□□□□ -0.59
CDH6-202ENST00000504835 HLFQ16534 295 aa11.35□□□□□ -0.59
CDH6-202ENST00000504835 LAPTM4BQ86VI4 370 aa11.35□□□□□ -0.59
CDH6-202ENST00000504835 TNS4Q8IZW8 715 aa11.35□□□□□ -0.59
CDH6-202ENST00000504835 CFAP53Q96M91 514 aa11.35□□□□□ -0.59
CDH6-202ENST00000504835 TRPM7Q96QT4 1865 aa11.35□□□□□ -0.59
CDH6-202ENST00000504835 ABCC12Q96J65 1359 aa11.34□□□□□ -0.59
CDH6-202ENST00000504835 NPR1P16066 1061 aa11.34□□□□□ -0.59
CDH6-202ENST00000504835 TPRNQ4KMQ1 711 aa11.34□□□□□ -0.59
CDH6-202ENST00000504835 CCDC93Q567U6 631 aa11.34□□□□□ -0.59
CDH6-202ENST00000504835 SOGA3Q5TF21 947 aa11.34□□□□□ -0.59
CDH6-202ENST00000504835 NPM2Q86SE8 214 aaKnown RBP11.34□□□□□ -0.59
CDH6-202ENST00000504835 NIP7Q9Y221 180 aaKnown RBP eCLIP11.34□□□□□ -0.59
CDH6-202ENST00000504835 TAF1P21675 1872 aa11.33□□□□□ -0.6
CDH6-202ENST00000504835 FAM177BA6PVY3 158 aa11.33□□□□□ -0.6
CDH6-202ENST00000504835 FKBP4Q02790 459 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDH6-202ENST00000504835 TAF1DQ9H5J8 278 aaPredicted RBP11.33□□□□□ -0.6
CDH6-202ENST00000504835 ZNF277Q9NRM2 450 aaPredicted RBP11.33□□□□□ -0.6
CDH6-202ENST00000504835 MIS18AQ9NYP9 233 aa11.33□□□□□ -0.6
CDH6-202ENST00000504835 MKRN1Q9UHC7 482 aaKnown RBP11.33□□□□□ -0.6
CDH6-202ENST00000504835 NUDCQ9Y266 331 aa11.33□□□□□ -0.6
CDH6-202ENST00000504835 ZNF652Q9Y2D9 606 aa11.33□□□□□ -0.6
CDH6-202ENST00000504835 SLC51AQ86UW1 340 aa11.33□□□□□ -0.6
CDH6-202ENST00000504835 RTF1Q92541 710 aaKnown RBP11.33□□□□□ -0.6
CDH6-202ENST00000504835 CNTNAP1P78357 1384 aa11.32□□□□□ -0.6
CDH6-202ENST00000504835 HTATSF1O43719 755 aaKnown RBP11.32□□□□□ -0.6
CDH6-202ENST00000504835 TPTE2Q6XPS3 522 aa11.32□□□□□ -0.6
CDH6-202ENST00000504835 LDHDQ86WU2 507 aa11.32□□□□□ -0.6
CDH6-202ENST00000504835 DDX27Q96GQ7 796 aaKnown RBP11.32□□□□□ -0.6
CDH6-202ENST00000504835 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
CDH6-202ENST00000504835 TAF7Q15545 349 aaPredicted RBP11.31□□□□□ -0.6
CDH6-202ENST00000504835 FBXW7Q969H0 707 aa11.31□□□□□ -0.6
CDH6-202ENST00000504835 IQCA1LA6NCM1 817 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms