RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 RAD17O75943 681 aa15.85■□□□□ 0.13
NEDD9-209ENST00000504634 CELF2O95319 508 aaKnown RBP15.85■□□□□ 0.13
NEDD9-209ENST00000504634 TNIP1Q15025 636 aa15.85■□□□□ 0.13
NEDD9-209ENST00000504634 ABHD8Q96I13 439 aa15.85■□□□□ 0.13
NEDD9-209ENST00000504634 KIAA2012Q0VF49 1180 aa15.84■□□□□ 0.13
NEDD9-209ENST00000504634 TCIRG1Q13488 830 aa15.84■□□□□ 0.13
NEDD9-209ENST00000504634 GRAPQ13588 217 aa15.84■□□□□ 0.13
NEDD9-209ENST00000504634 GRAPLQ8TC17 118 aaPredicted RBP15.84■□□□□ 0.13
NEDD9-209ENST00000504634 LTBP1Q14766 1721 aa15.84■□□□□ 0.13
NEDD9-209ENST00000504634 SH3TC1Q8TE82 1336 aa15.84■□□□□ 0.13
NEDD9-209ENST00000504634 NUP98P52948 1817 aa15.84■□□□□ 0.13
NEDD9-209ENST00000504634 AOC2O75106 756 aa15.83■□□□□ 0.12
NEDD9-209ENST00000504634 MAP2K2P36507 400 aa15.83■□□□□ 0.12
NEDD9-209ENST00000504634 TMPOP42166 694 aaKnown RBP15.83■□□□□ 0.12
NEDD9-209ENST00000504634 NEUROD2Q15784 382 aa15.83■□□□□ 0.12
NEDD9-209ENST00000504634 GLIS2Q9BZE0 524 aaPredicted RBP15.83■□□□□ 0.12
NEDD9-209ENST00000504634 ZNF408Q9H9D4 720 aa15.83■□□□□ 0.12
NEDD9-209ENST00000504634 TMC4Q7Z404 712 aa15.82■□□□□ 0.12
NEDD9-209ENST00000504634 ZC3H15Q8WU90 426 aaKnown RBP15.82■□□□□ 0.12
NEDD9-209ENST00000504634 ZNF428Q96B54 188 aa15.82■□□□□ 0.12
NEDD9-209ENST00000504634 LAS1LQ9Y4W2 734 aaKnown RBP15.82■□□□□ 0.12
NEDD9-209ENST00000504634 CDHR2Q9BYE9 1310 aa15.82■□□□□ 0.12
NEDD9-209ENST00000504634 H7C1D1 291 aa15.81■□□□□ 0.12
NEDD9-209ENST00000504634 RALBP1Q15311 655 aa15.81■□□□□ 0.12
NEDD9-209ENST00000504634 CDC37L1Q7L3B6 337 aa15.81■□□□□ 0.12
NEDD9-209ENST00000504634 SAPCD2Q86UD0 394 aa15.81■□□□□ 0.12
NEDD9-209ENST00000504634 CNOT7Q9UIV1 285 aaKnown RBP15.81■□□□□ 0.12
NEDD9-209ENST00000504634 TSKSQ9UJT2 592 aa15.81■□□□□ 0.12
NEDD9-209ENST00000504634 CCDC85CA6NKD9 419 aa15.8■□□□□ 0.12
NEDD9-209ENST00000504634 CCDC146Q8IYE0 955 aa15.8■□□□□ 0.12
NEDD9-209ENST00000504634 PGAP2Q9UHJ9 254 aa15.8■□□□□ 0.12
NEDD9-209ENST00000504634 DLG5Q8TDM6 1919 aa15.8■□□□□ 0.12
NEDD9-209ENST00000504634 HIRAP54198 1017 aaPredicted RBP15.79■□□□□ 0.12
NEDD9-209ENST00000504634 KRT24Q2M2I5 525 aa15.79■□□□□ 0.12
NEDD9-209ENST00000504634 HDGFL1Q5TGJ6 251 aa15.79■□□□□ 0.12
NEDD9-209ENST00000504634 TRPM4Q8TD43 1214 aa15.79■□□□□ 0.12
NEDD9-209ENST00000504634 CHPF2Q9P2E5 772 aa15.79■□□□□ 0.12
NEDD9-209ENST00000504634 NSFL1CQ9UNZ2 370 aaKnown RBP15.79■□□□□ 0.12
NEDD9-209ENST00000504634 C6orf229H3BNL8 230 aa15.78■□□□□ 0.12
NEDD9-209ENST00000504634 CA12O43570 354 aa15.78■□□□□ 0.12
NEDD9-209ENST00000504634 WASHC4Q2M389 1173 aa15.78■□□□□ 0.12
NEDD9-209ENST00000504634 ANKRD13DQ6ZTN6 518 aa15.78■□□□□ 0.12
NEDD9-209ENST00000504634 MICALL2Q8IY33 904 aa15.78■□□□□ 0.12
NEDD9-209ENST00000504634 PLBD2Q8NHP8 589 aa15.78■□□□□ 0.12
NEDD9-209ENST00000504634 HHIPL1Q96JK4 782 aa15.78■□□□□ 0.12
NEDD9-209ENST00000504634 YDJCA8MPS7 323 aa15.77■□□□□ 0.12
NEDD9-209ENST00000504634 ATP5J2-PTCD1G3V325 749 aa15.77■□□□□ 0.12
NEDD9-209ENST00000504634 CHL1O00533 1208 aa15.77■□□□□ 0.12
NEDD9-209ENST00000504634 RIMBP2O15034 1052 aa15.77■□□□□ 0.12
NEDD9-209ENST00000504634 FAM161AQ3B820 660 aa15.77■□□□□ 0.12
NEDD9-209ENST00000504634 USP48Q86UV5 1035 aa15.77■□□□□ 0.12
NEDD9-209ENST00000504634 FAM89AQ96GI7 184 aa15.77■□□□□ 0.12
NEDD9-209ENST00000504634 DBNDD1Q9H9R9 158 aa15.77■□□□□ 0.12
NEDD9-209ENST00000504634 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
NEDD9-209ENST00000504634 SHTN1A0MZ66 631 aa15.76■□□□□ 0.11
NEDD9-209ENST00000504634 BRPF1P55201 1214 aaPredicted RBP15.76■□□□□ 0.11
NEDD9-209ENST00000504634 WDR43Q15061 677 aaKnown RBP eCLIP15.76■□□□□ 0.11
NEDD9-209ENST00000504634 RTL5Q5HYW3 569 aaPredicted RBP15.76■□□□□ 0.11
NEDD9-209ENST00000504634 DPF2Q92785 391 aa15.76■□□□□ 0.11
NEDD9-209ENST00000504634 CELF1Q92879 486 aaKnown RBP15.76■□□□□ 0.11
NEDD9-209ENST00000504634 CFAP44Q96MT7 982 aa15.76■□□□□ 0.11
NEDD9-209ENST00000504634 DBF4Q9UBU7 674 aaPredicted RBP15.76■□□□□ 0.11
NEDD9-209ENST00000504634 PSMD14O00487 310 aa15.75■□□□□ 0.11
NEDD9-209ENST00000504634 HUNKP57058 714 aa15.75■□□□□ 0.11
NEDD9-209ENST00000504634 NOGQ13253 232 aa15.75■□□□□ 0.11
NEDD9-209ENST00000504634 SF3B3Q15393 1217 aaKnown RBP15.75■□□□□ 0.11
NEDD9-209ENST00000504634 RBM26Q5T8P6 1007 aaKnown RBP15.75■□□□□ 0.11
NEDD9-209ENST00000504634 SAMD7Q7Z3H4 446 aa15.75■□□□□ 0.11
NEDD9-209ENST00000504634 EYA3Q99504 573 aa15.75■□□□□ 0.11
NEDD9-209ENST00000504634 ISCA1Q9BUE6 129 aa15.75■□□□□ 0.11
NEDD9-209ENST00000504634 HOXB7P09629 217 aa15.74■□□□□ 0.11
NEDD9-209ENST00000504634 DOK7Q18PE1 504 aa15.74■□□□□ 0.11
NEDD9-209ENST00000504634 TBC1D10BQ4KMP7 808 aaPredicted RBP15.74■□□□□ 0.11
NEDD9-209ENST00000504634 KRT26Q7Z3Y9 468 aa15.74■□□□□ 0.11
NEDD9-209ENST00000504634 RUNDC1Q96C34 613 aa15.74■□□□□ 0.11
NEDD9-209ENST00000504634 HYPKQ9NX55 129 aa15.74■□□□□ 0.11
NEDD9-209ENST00000504634 THSD7BQ9C0I4 1608 aa15.73■□□□□ 0.11
NEDD9-209ENST00000504634 G3V3G9 751 aa15.73■□□□□ 0.11
NEDD9-209ENST00000504634 IRS4O14654 1257 aaPredicted RBP15.73■□□□□ 0.11
NEDD9-209ENST00000504634 ECE2O60344 883 aa15.73■□□□□ 0.11
NEDD9-209ENST00000504634 RPS12P25398 132 aaKnown RBP15.73■□□□□ 0.11
NEDD9-209ENST00000504634 GPSM2P81274 684 aa15.73■□□□□ 0.11
NEDD9-209ENST00000504634 MLLT1Q03111 559 aaPredicted RBP15.73■□□□□ 0.11
NEDD9-209ENST00000504634 DCAF8Q5TAQ9 597 aa15.73■□□□□ 0.11
NEDD9-209ENST00000504634 DCPSQ96C86 337 aaKnown RBP15.73■□□□□ 0.11
NEDD9-209ENST00000504634 POLLQ9UGP5 575 aa15.73■□□□□ 0.11
NEDD9-209ENST00000504634 TRIM35Q9UPQ4 493 aa15.73■□□□□ 0.11
NEDD9-209ENST00000504634 MYBBP1AQ9BQG0 1328 aaKnown RBP15.72■□□□□ 0.11
NEDD9-209ENST00000504634 RPS8P62241 208 aaKnown RBP15.72■□□□□ 0.11
NEDD9-209ENST00000504634 DUSP27Q5VZP5 1158 aa15.72■□□□□ 0.11
NEDD9-209ENST00000504634 DLK2Q6UY11 383 aa15.72■□□□□ 0.11
NEDD9-209ENST00000504634 C2orf69Q8N8R5 385 aa15.72■□□□□ 0.11
NEDD9-209ENST00000504634 ZC3H12CQ9C0D7 883 aaKnown RBP15.72■□□□□ 0.11
NEDD9-209ENST00000504634 MCOLN1Q9GZU1 580 aa15.72■□□□□ 0.11
NEDD9-209ENST00000504634 HSP90B1P14625 803 aaKnown RBP15.71■□□□□ 0.11
NEDD9-209ENST00000504634 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
NEDD9-209ENST00000504634 RIC3Q7Z5B4 369 aa15.71■□□□□ 0.11
NEDD9-209ENST00000504634 TBC1D16Q8TBP0 767 aa15.71■□□□□ 0.11
NEDD9-209ENST00000504634 GBA2Q9HCG7 927 aaPredicted RBP15.71■□□□□ 0.11
NEDD9-209ENST00000504634 ADM5C9JUS6 153 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms