RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 IARSP41252 1262 aaKnown RBP27.02■■□□□ 1.92
TRAPPC11-203ENST00000504526 SP8Q8IXZ3 490 aa27.02■■□□□ 1.92
TRAPPC11-203ENST00000504526 MIER1Q8N108 512 aa27.02■■□□□ 1.92
TRAPPC11-203ENST00000504526 PDE8AO60658 829 aa27.01■■□□□ 1.91
TRAPPC11-203ENST00000504526 CWF19L2Q2TBE0 894 aaKnown RBP27■■□□□ 1.91
TRAPPC11-203ENST00000504526 LINS1Q8NG48 757 aa27■■□□□ 1.91
TRAPPC11-203ENST00000504526 CCDC152Q4G0S7 254 aa26.99■■□□□ 1.91
TRAPPC11-203ENST00000504526 C16orf71Q8IYS4 520 aaPredicted RBP26.99■■□□□ 1.91
TRAPPC11-203ENST00000504526 SUPT20HQ8NEM7 779 aa26.99■■□□□ 1.91
TRAPPC11-203ENST00000504526 VPS33BQ9H267 617 aa26.99■■□□□ 1.91
TRAPPC11-203ENST00000504526 TOMM70O94826 608 aa26.98■■□□□ 1.91
TRAPPC11-203ENST00000504526 JDP2Q8WYK2 163 aa26.98■■□□□ 1.91
TRAPPC11-203ENST00000504526 RRAGCQ9HB90 399 aa26.98■■□□□ 1.91
TRAPPC11-203ENST00000504526 VEGFAP15692 232 aaPredicted RBP26.97■■□□□ 1.91
TRAPPC11-203ENST00000504526 H7C1W4 665 aa26.96■■□□□ 1.91
TRAPPC11-203ENST00000504526 GCKRQ14397 625 aa26.96■■□□□ 1.91
TRAPPC11-203ENST00000504526 DPP8Q6V1X1 898 aaPredicted RBP26.96■■□□□ 1.91
TRAPPC11-203ENST00000504526 MPNDQ8N594 471 aa26.96■■□□□ 1.91
TRAPPC11-203ENST00000504526 RTFDC1Q9BY42 306 aaPredicted RBP26.96■■□□□ 1.91
TRAPPC11-203ENST00000504526 TRMT2AQ8IZ69 625 aaKnown RBP26.95■■□□□ 1.9
TRAPPC11-203ENST00000504526 JARID2Q92833 1246 aaPredicted RBP26.95■■□□□ 1.9
TRAPPC11-203ENST00000504526 CELF1Q92879 486 aaKnown RBP26.95■■□□□ 1.9
TRAPPC11-203ENST00000504526 CDCA7LQ96GN5 454 aa26.95■■□□□ 1.9
TRAPPC11-203ENST00000504526 RPS8P62241 208 aaKnown RBP26.94■■□□□ 1.9
TRAPPC11-203ENST00000504526 LARGE2Q8N3Y3 721 aa26.94■■□□□ 1.9
TRAPPC11-203ENST00000504526 FZD9O00144 591 aa26.93■■□□□ 1.9
TRAPPC11-203ENST00000504526 CTSWP56202 376 aa26.93■■□□□ 1.9
TRAPPC11-203ENST00000504526 RBM46Q8TBY0 533 aaKnown RBP26.93■■□□□ 1.9
TRAPPC11-203ENST00000504526 WDR90Q96KV7 1748 aa26.93■■□□□ 1.9
TRAPPC11-203ENST00000504526 CT47B1P0C2W7 299 aaPredicted RBP26.92■■□□□ 1.9
TRAPPC11-203ENST00000504526 UBE3BQ7Z3V4 1068 aa26.92■■□□□ 1.9
TRAPPC11-203ENST00000504526 SLC51AQ86UW1 340 aa26.92■■□□□ 1.9
TRAPPC11-203ENST00000504526 LRRC37AA6NMS7 1700 aa26.91■■□□□ 1.9
TRAPPC11-203ENST00000504526 F6X3S4 739 aa26.91■■□□□ 1.9
TRAPPC11-203ENST00000504526 PPIP5K2O43314 1243 aa26.91■■□□□ 1.9
TRAPPC11-203ENST00000504526 DDNO94850 711 aaPredicted RBP26.91■■□□□ 1.9
TRAPPC11-203ENST00000504526 BEND3Q5T5X7 828 aa26.91■■□□□ 1.9
TRAPPC11-203ENST00000504526 ALDH1L2Q3SY69 923 aa26.9■■□□□ 1.9
TRAPPC11-203ENST00000504526 NIM1KQ8IY84 436 aa26.9■■□□□ 1.9
TRAPPC11-203ENST00000504526 MRPL50Q8N5N7 158 aaKnown RBP26.9■■□□□ 1.9
TRAPPC11-203ENST00000504526 PLA2G12BQ9BX93 195 aa26.9■■□□□ 1.9
TRAPPC11-203ENST00000504526 SEC31BQ9NQW1 1179 aa26.9■■□□□ 1.9
TRAPPC11-203ENST00000504526 EIF6P56537 245 aaKnown RBP26.89■■□□□ 1.9
TRAPPC11-203ENST00000504526 TTLL11Q8NHH1 800 aa26.89■■□□□ 1.9
TRAPPC11-203ENST00000504526 L3MBTL3Q96JM7 780 aaPredicted RBP26.89■■□□□ 1.9
TRAPPC11-203ENST00000504526 CDC5LQ99459 802 aaKnown RBP26.89■■□□□ 1.9
TRAPPC11-203ENST00000504526 TAF1P21675 1872 aa26.89■■□□□ 1.89
TRAPPC11-203ENST00000504526 PTPRCP08575 1304 aa26.89■■□□□ 1.89
TRAPPC11-203ENST00000504526 RTL9Q8NET4 1388 aa26.88■■□□□ 1.89
TRAPPC11-203ENST00000504526 IQCA1LA6NCM1 817 aa26.88■■□□□ 1.89
TRAPPC11-203ENST00000504526 POTECB2RU33 542 aa26.88■■□□□ 1.89
TRAPPC11-203ENST00000504526 CASP7P55210 303 aa26.88■■□□□ 1.89
TRAPPC11-203ENST00000504526 AOC3Q16853 763 aa26.88■■□□□ 1.89
TRAPPC11-203ENST00000504526 ANKRD18AQ8IVF6 992 aa26.88■■□□□ 1.89
TRAPPC11-203ENST00000504526 ZNF541Q9H0D2 1346 aa26.88■■□□□ 1.89
TRAPPC11-203ENST00000504526 ALDH1L1O75891 902 aa26.87■■□□□ 1.89
TRAPPC11-203ENST00000504526 KIAA2012Q0VF49 1180 aa26.87■■□□□ 1.89
TRAPPC11-203ENST00000504526 FSTL1Q12841 308 aa26.87■■□□□ 1.89
TRAPPC11-203ENST00000504526 GPC2Q8N158 579 aa26.87■■□□□ 1.89
TRAPPC11-203ENST00000504526 SSH1Q8WYL5 1049 aa26.87■■□□□ 1.89
TRAPPC11-203ENST00000504526 CCDC85AQ96PX6 553 aaPredicted RBP26.87■■□□□ 1.89
TRAPPC11-203ENST00000504526 NSFL1CQ9UNZ2 370 aaKnown RBP26.87■■□□□ 1.89
TRAPPC11-203ENST00000504526 SLC4A10Q6U841 1118 aa26.85■■□□□ 1.89
TRAPPC11-203ENST00000504526 SRCIN1Q9C0H9 1055 aa26.85■■□□□ 1.89
TRAPPC11-203ENST00000504526 COL4A5P29400 1685 aa26.85■■□□□ 1.89
TRAPPC11-203ENST00000504526 GPSM2P81274 684 aa26.84■■□□□ 1.89
TRAPPC11-203ENST00000504526 SMC1BQ8NDV3 1235 aa26.84■■□□□ 1.89
TRAPPC11-203ENST00000504526 EYA3Q99504 573 aa26.84■■□□□ 1.89
TRAPPC11-203ENST00000504526 GREM2Q9H772 168 aa26.84■■□□□ 1.89
TRAPPC11-203ENST00000504526 PODXL2Q9NZ53 605 aa26.84■■□□□ 1.89
TRAPPC11-203ENST00000504526 MYH3P11055 1940 aa26.84■■□□□ 1.89
TRAPPC11-203ENST00000504526 COL4A1P02462 1669 aa26.83■■□□□ 1.89
TRAPPC11-203ENST00000504526 HSPA6P17066 643 aa26.83■■□□□ 1.89
TRAPPC11-203ENST00000504526 ZNRF3Q9ULT6 936 aa26.83■■□□□ 1.89
TRAPPC11-203ENST00000504526 DUOX1Q9NRD9 1551 aa26.83■■□□□ 1.89
TRAPPC11-203ENST00000504526 C6orf229H3BNL8 230 aa26.82■■□□□ 1.88
TRAPPC11-203ENST00000504526 GRM8O00222 908 aa26.82■■□□□ 1.88
TRAPPC11-203ENST00000504526 CSF1RP07333 972 aa26.82■■□□□ 1.88
TRAPPC11-203ENST00000504526 WASHC4Q2M389 1173 aa26.82■■□□□ 1.88
TRAPPC11-203ENST00000504526 SMC4Q9NTJ3 1288 aa26.82■■□□□ 1.88
TRAPPC11-203ENST00000504526 BSDC1Q9NW68 430 aaPredicted RBP26.81■■□□□ 1.88
TRAPPC11-203ENST00000504526 C9orf78Q9NZ63 289 aaPredicted RBP26.81■■□□□ 1.88
TRAPPC11-203ENST00000504526 HNRNPUQ00839 825 aaKnown RBP eCLIP26.8■■□□□ 1.88
TRAPPC11-203ENST00000504526 BCL2L13Q9BXK5 485 aa26.8■■□□□ 1.88
TRAPPC11-203ENST00000504526 ANKIB1Q9P2G1 1089 aa26.8■■□□□ 1.88
TRAPPC11-203ENST00000504526 POLLQ9UGP5 575 aa26.8■■□□□ 1.88
TRAPPC11-203ENST00000504526 HACL1Q9UJ83 578 aa26.8■■□□□ 1.88
TRAPPC11-203ENST00000504526 GJA3Q9Y6H8 435 aa26.8■■□□□ 1.88
TRAPPC11-203ENST00000504526 SCN4AP35499 1836 aa26.8■■□□□ 1.88
TRAPPC11-203ENST00000504526 IGHMBP2P38935 993 aaKnown RBP26.79■■□□□ 1.88
TRAPPC11-203ENST00000504526 TBC1D16Q8TBP0 767 aa26.79■■□□□ 1.88
TRAPPC11-203ENST00000504526 GGA1Q9UJY5 639 aa26.79■■□□□ 1.88
TRAPPC11-203ENST00000504526 ITGA6P23229 1130 aa26.78■■□□□ 1.88
TRAPPC11-203ENST00000504526 TAF1DQ9H5J8 278 aaPredicted RBP26.78■■□□□ 1.88
TRAPPC11-203ENST00000504526 XDHP47989 1333 aa26.78■■□□□ 1.88
TRAPPC11-203ENST00000504526 LTBP1Q14766 1721 aa26.78■■□□□ 1.88
TRAPPC11-203ENST00000504526 UFL1O94874 794 aa26.77■■□□□ 1.88
TRAPPC11-203ENST00000504526 BRPF1P55201 1214 aaPredicted RBP26.77■■□□□ 1.88
TRAPPC11-203ENST00000504526 FAM161AQ3B820 660 aa26.77■■□□□ 1.88
TRAPPC11-203ENST00000504526 ANKRD18BA2A2Z9 1011 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms