RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 ATG7O95352 703 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 F12P00748 615 aaPredicted RBP8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 PPP4CP60510 307 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 TTC22Q5TAA0 569 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 SIRT1Q96EB6 747 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 HS3ST6Q96QI5 342 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 HPS5Q9UPZ3 1129 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 CDC42BPGQ6DT37 1551 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 PTPRUQ92729 1446 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 SDSP20132 328 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 LSM11P83369 360 aaKnown RBP eCLIP8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 KCNA1Q09470 495 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 HSP90AB2PQ58FF8 381 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 TSHZ3Q63HK5 1081 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 THAP11Q96EK4 314 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 PRR14Q9BWN1 585 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 USP26Q9BXU7 913 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 LTBP4Q8N2S1 1624 aa8.09□□□□□ -1.11
NPHP3-AS1-202ENST00000504440 ZNF335Q9H4Z2 1342 aaPredicted RBP8.09□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 F6X3S4 739 aa8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 CTHP32929 405 aa8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 FOXD4L5Q5VV16 416 aaPredicted RBP8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 CEP85Q6P2H3 762 aa8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 G2E3Q7L622 706 aa8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 FOXD4L4Q8WXT5 416 aaPredicted RBP8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 GBP4Q96PP9 640 aa8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 PCDHB3Q9Y5E6 796 aa8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 EDC4Q6P2E9 1401 aaKnown RBP8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 AK9Q5TCS8 1911 aa8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 ATP7BP35670 1465 aa8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 BAG4O95429 457 aaKnown RBP8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 INTS3Q68E01 1043 aaKnown RBP8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 ZGPATQ8N5A5 531 aaKnown RBP8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 ANKRD44Q8N8A2 993 aa8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 ANKK1Q8NFD2 765 aa8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 NAP1L5Q96NT1 182 aaPredicted RBP8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 XRN1Q8IZH2 1706 aaKnown RBP8.08□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 HRO43593 1189 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 SLC4A10Q6U841 1118 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 DEPDC4Q8N2C3 294 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 CHMP4BQ9H444 224 aaKnown RBP8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 VRTNQ9H8Y1 702 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 IVNS1ABPQ9Y6Y0 642 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 DLG5Q8TDM6 1919 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 ROBO2Q9HCK4 1378 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 SOWAHBA6NEL2 793 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 CHL1O00533 1208 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 RGS12O14924 1447 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 FMNL1O95466 1100 aaPredicted RBP8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 LMOD3Q0VAK6 560 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 MCTP1Q6DN14 999 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 CHD2O14647 1828 aaKnown RBP8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 MSH6P52701 1360 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 STRCP1A6NGW2 1772 aa8.07□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 ATP10DQ9P241 1426 aa8.06□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 GOLGA8CPA6NN73 597 aa8.06□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 NCLP19338 710 aaKnown RBP8.06□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 AMOTL2Q9Y2J4 779 aa8.06□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 JUNDP17535 347 aa8.06□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 PTPRNQ16849 979 aa8.06□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 FAM174AQ8TBP5 190 aa8.06□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 DDX49Q9Y6V7 483 aaKnown RBP8.06□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 AATKQ6ZMQ8 1374 aa8.06□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 CDK12Q9NYV4 1490 aaPredicted RBP8.06□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 USP17L3A6NCW0 530 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 USP17L4A6NCW7 530 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 ESPNB1AK53 854 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 PATL2C9JE40 543 aaKnown RBP8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 SKIP12755 728 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 USP17L1Q7RTZ2 530 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 STK32AQ8WU08 396 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 ZMIZ1Q9ULJ6 1067 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 RTL1A6NKG5 1358 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 ZDHHC9Q9Y397 364 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 ACEP12821 1306 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 TTC21BQ7Z4L5 1316 aa8.05□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 NR1I2O75469 434 aa8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 RABEP1Q15276 862 aa8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 MTHFSDQ2M296 383 aaKnown RBP8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 ANKRD13DQ6ZTN6 518 aa8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 PRDM9Q9NQV7 894 aa8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 TSR3Q9UJK0 312 aaKnown RBP8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 EXOC6BQ9Y2D4 811 aa8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 USP17L5A8MUK1 530 aa8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 SKOR2Q2VWA4 1001 aaPredicted RBP8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 TMEM164Q5U3C3 297 aa8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 CAVIN1Q6NZI2 390 aaKnown RBP8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 RPAP2Q8IXW5 612 aaPredicted RBP8.04□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 PRPF40AO75400 957 aaKnown RBP8.03□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 KCNA6P17658 529 aa8.03□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 LHX8Q68G74 356 aa8.03□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 NOL8Q76FK4 1167 aaKnown RBP8.03□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 OCSTAMPQ9BR26 566 aa8.03□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 LMBRD1Q9NUN5 540 aa8.03□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 NSFL1CQ9UNZ2 370 aaKnown RBP8.03□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 MAP3K19Q56UN5 1328 aa8.03□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 CYP2E1P05181 493 aaPredicted RBP8.03□□□□□ -1.12
NPHP3-AS1-202ENST00000504440 FAM160A2Q8N612 972 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms