RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 ZNF652Q9Y2D9 606 aa11.61□□□□□ -0.55
ARHGEF28-206ENST00000504003 PXDNLA1KZ92 1463 aa11.61□□□□□ -0.55
ARHGEF28-206ENST00000504003 PI4KAP2A4QPH2 592 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 ANXA1P04083 346 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 ITPK1Q13572 414 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 MVPQ14764 893 aaKnown RBP11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 PROSER3Q2NL68 480 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 INTS3Q68E01 1043 aaKnown RBP11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 G2E3Q7L622 706 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 PTF1AQ7RTS3 328 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 PI4KAP1Q8N8J0 262 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 PANK1Q8TE04 598 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 ADAM33Q9BZ11 813 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 ZBTB1Q9Y2K1 713 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 MAP3K2Q9Y2U5 619 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 TAF1LQ8IZX4 1826 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 ABCC4O15439 1325 aa11.6□□□□□ -0.55
ARHGEF28-206ENST00000504003 NBPF26B4DH59 902 aa11.59□□□□□ -0.55
ARHGEF28-206ENST00000504003 BHMG1C9JSJ3 638 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF28-206ENST00000504003 RPS6KA4O75676 772 aa11.59□□□□□ -0.55
ARHGEF28-206ENST00000504003 IRX6P78412 446 aaPredicted RBP11.59□□□□□ -0.55
ARHGEF28-206ENST00000504003 NBPF14Q5TI25 921 aa11.59□□□□□ -0.55
ARHGEF28-206ENST00000504003 NBPF10Q6P3W6 841 aaKnown RBP11.59□□□□□ -0.55
ARHGEF28-206ENST00000504003 NBPF15Q8N660 670 aa11.59□□□□□ -0.55
ARHGEF28-206ENST00000504003 LINC00116Q8NCU8 138 aa11.59□□□□□ -0.55
ARHGEF28-206ENST00000504003 FLAD1Q8NFF5 587 aa11.59□□□□□ -0.55
ARHGEF28-206ENST00000504003 SRCIN1Q9C0H9 1055 aa11.59□□□□□ -0.55
ARHGEF28-206ENST00000504003 COG6Q9Y2V7 657 aa11.59□□□□□ -0.55
ARHGEF28-206ENST00000504003 C4BP0C0L5 1744 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 ERVV-1B6SEH8 477 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 GNPATO15228 680 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 ZPR1O75312 459 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 ALDH1L1O75891 902 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 GNAI3P08754 354 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 EIF5P55010 431 aaKnown RBP11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 TRAPPC3LQ5T215 181 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 INTS5Q6P9B9 1019 aaKnown RBP11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 DZIP3Q86Y13 1208 aaKnown RBP11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 TMEM57Q8N5G2 664 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 LINS1Q8NG48 757 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 WNT2BQ93097 391 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 CRBNQ96SW2 442 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 GTF3C3Q9Y5Q9 886 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 ATP10DQ9P241 1426 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 RREB1Q92766 1687 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 MAP3K15Q6ZN16 1313 aa11.58□□□□□ -0.56
ARHGEF28-206ENST00000504003 COL15A1P39059 1388 aa11.57□□□□□ -0.56
ARHGEF28-206ENST00000504003 PPP1R3GB7ZBB8 358 aa11.57□□□□□ -0.56
ARHGEF28-206ENST00000504003 F6X3S4 739 aa11.57□□□□□ -0.56
ARHGEF28-206ENST00000504003 RFC4P35249 363 aa11.57□□□□□ -0.56
ARHGEF28-206ENST00000504003 PIP4K2AP48426 406 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF28-206ENST00000504003 THSD4Q6ZMP0 1018 aa11.57□□□□□ -0.56
ARHGEF28-206ENST00000504003 FBXW7Q969H0 707 aa11.57□□□□□ -0.56
ARHGEF28-206ENST00000504003 METTL22Q9BUU2 404 aaPredicted RBP11.57□□□□□ -0.56
ARHGEF28-206ENST00000504003 EP400Q96L91 3159 aa11.57□□□□□ -0.56
ARHGEF28-206ENST00000504003 SSFA2P28290 1259 aa11.56□□□□□ -0.56
ARHGEF28-206ENST00000504003 C20orf194Q5TEA3 1177 aa11.56□□□□□ -0.56
ARHGEF28-206ENST00000504003 LRP10Q7Z4F1 713 aa11.56□□□□□ -0.56
ARHGEF28-206ENST00000504003 MYD88Q99836 296 aa11.56□□□□□ -0.56
ARHGEF28-206ENST00000504003 EMILIN3Q9NT22 766 aa11.56□□□□□ -0.56
ARHGEF28-206ENST00000504003 C9orf78Q9NZ63 289 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF28-206ENST00000504003 TFCP2L1Q9NZI6 479 aa11.56□□□□□ -0.56
ARHGEF28-206ENST00000504003 N4BP2Q86UW6 1770 aaPredicted RBP11.56□□□□□ -0.56
ARHGEF28-206ENST00000504003 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
ARHGEF28-206ENST00000504003 ADCY9O60503 1353 aa11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 RLBP1P12271 317 aa11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 HSP90B1P14625 803 aaKnown RBP11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 KCNQ4P56696 695 aa11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 CLEC4GQ6UXB4 293 aa11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 GIGYF2Q6Y7W6 1299 aaKnown RBP11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 TTLL7Q6ZT98 887 aa11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 EXOC6Q8TAG9 804 aa11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 ZBTB3Q9H5J0 574 aa11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 LRRC4BQ9NT99 713 aa11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 PPP4R2Q9NY27 417 aa11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 STK32BQ9NY57 414 aa11.55□□□□□ -0.56
ARHGEF28-206ENST00000504003 IBTKQ9P2D0 1353 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 MYH14Q7Z406 1995 aaKnown RBP11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 UBTFL1P0CB47 393 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 EN1Q05925 392 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 TCIRG1Q13488 830 aa11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 BEND3Q5T5X7 828 aa11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 TYW1BQ6NUM6 668 aa11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 CCDC191Q8NCU4 936 aa11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 CCDC136Q96JN2 1154 aa11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 CAMKK2Q96RR4 588 aa11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 CWC25Q9NXE8 425 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 NARFQ9UHQ1 456 aa11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 TBC1D2BQ9UPU7 963 aa11.54□□□□□ -0.56
ARHGEF28-206ENST00000504003 AFDNP55196 1824 aaKnown RBP11.53□□□□□ -0.56
ARHGEF28-206ENST00000504003 NUP188Q5SRE5 1749 aa11.53□□□□□ -0.56
ARHGEF28-206ENST00000504003 ZBTB7BO15156 539 aaPredicted RBP11.53□□□□□ -0.56
ARHGEF28-206ENST00000504003 PHF14O94880 888 aa11.53□□□□□ -0.56
ARHGEF28-206ENST00000504003 GNAI2P04899 355 aa11.53□□□□□ -0.56
ARHGEF28-206ENST00000504003 EZH2Q15910 746 aaKnown RBP11.53□□□□□ -0.56
ARHGEF28-206ENST00000504003 PARP10Q53GL7 1025 aa11.53□□□□□ -0.56
ARHGEF28-206ENST00000504003 PCDHGA10Q9Y5H3 936 aa11.53□□□□□ -0.56
ARHGEF28-206ENST00000504003 ANKRD36CQ5JPF3 1778 aa11.52□□□□□ -0.57
ARHGEF28-206ENST00000504003 NUP98P52948 1817 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms