RNA–Protein interactions for RNA: ENST00000503916.1

SPOCK1-203, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-203ENST00000503916 CHMP3Q9Y3E7 222 aa17.23■□□□□ 0.35
SPOCK1-203ENST00000503916 UTYO14607 1347 aa17.22■□□□□ 0.35
SPOCK1-203ENST00000503916 PLIN1O60240 522 aa17.22■□□□□ 0.35
SPOCK1-203ENST00000503916 NBPF7P0C2Y1 421 aaPredicted RBP17.22■□□□□ 0.35
SPOCK1-203ENST00000503916 PDE3AQ14432 1141 aa17.22■□□□□ 0.35
SPOCK1-203ENST00000503916 C3orf67Q6ZVT6 689 aa17.22■□□□□ 0.35
SPOCK1-203ENST00000503916 GRAPQ13588 217 aa17.21■□□□□ 0.35
SPOCK1-203ENST00000503916 PRPF40BQ6NWY9 871 aaKnown RBP17.21■□□□□ 0.35
SPOCK1-203ENST00000503916 TMC4Q7Z404 712 aa17.21■□□□□ 0.35
SPOCK1-203ENST00000503916 TTLL11Q8NHH1 800 aa17.21■□□□□ 0.35
SPOCK1-203ENST00000503916 GRAPLQ8TC17 118 aaPredicted RBP17.21■□□□□ 0.35
SPOCK1-203ENST00000503916 PANK1Q8TE04 598 aa17.21■□□□□ 0.35
SPOCK1-203ENST00000503916 CDC5LQ99459 802 aaKnown RBP17.21■□□□□ 0.35
SPOCK1-203ENST00000503916 TNNQ9UQP3 1299 aa17.21■□□□□ 0.35
SPOCK1-203ENST00000503916 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
SPOCK1-203ENST00000503916 LMBR1LQ6UX01 489 aa17.2■□□□□ 0.34
SPOCK1-203ENST00000503916 CCDC85AQ96PX6 553 aaPredicted RBP17.2■□□□□ 0.34
SPOCK1-203ENST00000503916 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
SPOCK1-203ENST00000503916 ANKRD18BA2A2Z9 1011 aa17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 CSF1RP07333 972 aa17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 RRP1P56182 461 aaKnown RBP17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 RPS8P62241 208 aaKnown RBP17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 IFIT5Q13325 482 aaKnown RBP17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 CCDC57Q2TAC2 916 aa17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 GRIPAP1Q4V328 841 aa17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 TAF7LQ5H9L4 462 aa17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 ARHGAP27Q6ZUM4 889 aa17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 SUCLG2Q96I99 432 aa17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 DDX19BQ9UMR2 479 aa17.19■□□□□ 0.34
SPOCK1-203ENST00000503916 PPEF1O14829 653 aaPredicted RBP17.18■□□□□ 0.34
SPOCK1-203ENST00000503916 C21orf2O43822 256 aa17.18■□□□□ 0.34
SPOCK1-203ENST00000503916 GNAI2P04899 355 aa17.18■□□□□ 0.34
SPOCK1-203ENST00000503916 IGHMBP2P38935 993 aaKnown RBP17.18■□□□□ 0.34
SPOCK1-203ENST00000503916 FOXO4P98177 505 aa17.18■□□□□ 0.34
SPOCK1-203ENST00000503916 MEIS3Q99687 375 aa17.18■□□□□ 0.34
SPOCK1-203ENST00000503916 GREM2Q9H772 168 aa17.18■□□□□ 0.34
SPOCK1-203ENST00000503916 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
SPOCK1-203ENST00000503916 TNRC6CQ9HCJ0 1690 aaKnown RBP17.17■□□□□ 0.34
SPOCK1-203ENST00000503916 RLBP1P12271 317 aa17.17■□□□□ 0.34
SPOCK1-203ENST00000503916 MVPQ14764 893 aaKnown RBP17.17■□□□□ 0.34
SPOCK1-203ENST00000503916 CCDC93Q567U6 631 aa17.17■□□□□ 0.34
SPOCK1-203ENST00000503916 RTKN2Q8IZC4 609 aa17.17■□□□□ 0.34
SPOCK1-203ENST00000503916 BICC1Q9H694 974 aaKnown RBP17.17■□□□□ 0.34
SPOCK1-203ENST00000503916 LAMB2P55268 1798 aa17.17■□□□□ 0.34
SPOCK1-203ENST00000503916 RTL9Q8NET4 1388 aa17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 KIAA1551Q9HCM1 1747 aa17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 MYH3P11055 1940 aa17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 DLEC1Q9Y238 1755 aa17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 YBX3P16989 372 aaKnown RBP eCLIP17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 ITGA6P23229 1130 aa17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 SP8Q8IXZ3 490 aa17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 MPHOSPH8Q99549 860 aa17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 SEC31BQ9NQW1 1179 aa17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 COG6Q9Y2V7 657 aa17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 LRRFIP2Q9Y608 721 aaKnown RBP17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 COL11A2P13942 1736 aaPredicted RBP17.16■□□□□ 0.34
SPOCK1-203ENST00000503916 CENPBP07199 599 aaPredicted RBP17.15■□□□□ 0.34
SPOCK1-203ENST00000503916 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
SPOCK1-203ENST00000503916 EPHA10Q5JZY3 1008 aa17.15■□□□□ 0.34
SPOCK1-203ENST00000503916 CELF1Q92879 486 aaKnown RBP17.15■□□□□ 0.34
SPOCK1-203ENST00000503916 ATP6V0A2Q9Y487 856 aa17.15■□□□□ 0.34
SPOCK1-203ENST00000503916 ZBTB7BO15156 539 aaPredicted RBP17.14■□□□□ 0.33
SPOCK1-203ENST00000503916 RABL6Q3YEC7 729 aaPredicted RBP17.14■□□□□ 0.33
SPOCK1-203ENST00000503916 SUPT16HQ9Y5B9 1047 aaKnown RBP17.14■□□□□ 0.33
SPOCK1-203ENST00000503916 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
SPOCK1-203ENST00000503916 BRCA1P38398 1863 aaKnown RBP17.13■□□□□ 0.33
SPOCK1-203ENST00000503916 SLX4Q8IY92 1834 aa17.12■□□□□ 0.33
SPOCK1-203ENST00000503916 MPNDQ8N594 471 aa17.12■□□□□ 0.33
SPOCK1-203ENST00000503916 ANKRD44Q8N8A2 993 aa17.12■□□□□ 0.33
SPOCK1-203ENST00000503916 SUPT20HQ8NEM7 779 aa17.12■□□□□ 0.33
SPOCK1-203ENST00000503916 C7orf43Q8WVR3 580 aa17.12■□□□□ 0.33
SPOCK1-203ENST00000503916 CNNM1Q9NRU3 951 aa17.12■□□□□ 0.33
SPOCK1-203ENST00000503916 BSDC1Q9NW68 430 aaPredicted RBP17.12■□□□□ 0.33
SPOCK1-203ENST00000503916 C20orf194Q5TEA3 1177 aa17.11■□□□□ 0.33
SPOCK1-203ENST00000503916 DPP8Q6V1X1 898 aaPredicted RBP17.11■□□□□ 0.33
SPOCK1-203ENST00000503916 LDHAL6AQ6ZMR3 332 aa17.11■□□□□ 0.33
SPOCK1-203ENST00000503916 ANKIB1Q9P2G1 1089 aa17.11■□□□□ 0.33
SPOCK1-203ENST00000503916 ARFGEF1Q9Y6D6 1849 aa17.11■□□□□ 0.33
SPOCK1-203ENST00000503916 CACNA1SQ13698 1873 aa17.11■□□□□ 0.33
SPOCK1-203ENST00000503916 ANKRD2Q9GZV1 360 aa17.1■□□□□ 0.33
SPOCK1-203ENST00000503916 TAOK3Q9H2K8 898 aa17.1■□□□□ 0.33
SPOCK1-203ENST00000503916 NSFL1CQ9UNZ2 370 aaKnown RBP17.1■□□□□ 0.33
SPOCK1-203ENST00000503916 SRGAP3O43295 1099 aa17.09■□□□□ 0.33
SPOCK1-203ENST00000503916 FKBP4Q02790 459 aaKnown RBP eCLIP17.09■□□□□ 0.33
SPOCK1-203ENST00000503916 LMNB1P20700 586 aa17.08■□□□□ 0.32
SPOCK1-203ENST00000503916 ZNF594Q96JF6 807 aaPredicted RBP17.08■□□□□ 0.32
SPOCK1-203ENST00000503916 PSMD1Q99460 953 aa17.08■□□□□ 0.32
SPOCK1-203ENST00000503916 XDHP47989 1333 aa17.07■□□□□ 0.32
SPOCK1-203ENST00000503916 LTBP3Q9NS15 1303 aa17.07■□□□□ 0.32
SPOCK1-203ENST00000503916 C6orf229H3BNL8 230 aa17.07■□□□□ 0.32
SPOCK1-203ENST00000503916 KCNJ4P48050 445 aa17.07■□□□□ 0.32
SPOCK1-203ENST00000503916 ATP8B2P98198 1209 aa17.07■□□□□ 0.32
SPOCK1-203ENST00000503916 MTX1Q13505 466 aa17.07■□□□□ 0.32
SPOCK1-203ENST00000503916 OLFM4Q6UX06 510 aa17.07■□□□□ 0.32
SPOCK1-203ENST00000503916 EYA3Q99504 573 aa17.07■□□□□ 0.32
SPOCK1-203ENST00000503916 C1orf115Q9H7X2 142 aa17.07■□□□□ 0.32
SPOCK1-203ENST00000503916 ZBTB40Q9NUA8 1239 aa17.07■□□□□ 0.32
SPOCK1-203ENST00000503916 GGA1Q9UJY5 639 aa17.07■□□□□ 0.32
SPOCK1-203ENST00000503916 FBXO3Q9UK99 471 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms