RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-218	ENST00000503547	HCLS1	P14317	486 aa	Predicted RBP	11.66	□□□□□ -0.54
NR1I3-218	ENST00000503547	LMOD3	Q0VAK6	560 aa		11.66	□□□□□ -0.54
NR1I3-218	ENST00000503547	CST9	Q5W186	159 aa		11.66	□□□□□ -0.54
NR1I3-218	ENST00000503547	CIAPIN1	Q6FI81	312 aa		11.66	□□□□□ -0.54
NR1I3-218	ENST00000503547	DDX46	Q7L014	1031 aa	Known RBP	11.66	□□□□□ -0.54
NR1I3-218	ENST00000503547	VPS33B	Q9H267	617 aa		11.66	□□□□□ -0.54
NR1I3-218	ENST00000503547	TRMT112	Q9UI30	125 aa	Known RBP	11.66	□□□□□ -0.54
NR1I3-218	ENST00000503547	TSKS	Q9UJT2	592 aa		11.66	□□□□□ -0.54
NR1I3-218	ENST00000503547	TLL2	Q9Y6L7	1015 aa		11.66	□□□□□ -0.54
NR1I3-218	ENST00000503547	CCDC85C	A6NKD9	419 aa		11.65	□□□□□ -0.54
NR1I3-218	ENST00000503547	AOC2	O75106	756 aa		11.65	□□□□□ -0.54
NR1I3-218	ENST00000503547	BBOX1	O75936	387 aa		11.65	□□□□□ -0.54
NR1I3-218	ENST00000503547	TNIP1	Q15025	636 aa		11.65	□□□□□ -0.54
NR1I3-218	ENST00000503547	PDIA6	Q15084	440 aa		11.65	□□□□□ -0.54
NR1I3-218	ENST00000503547	SLC10A5	Q5PT55	438 aa		11.65	□□□□□ -0.54
NR1I3-218	ENST00000503547	COPS6	Q7L5N1	327 aa		11.65	□□□□□ -0.54
NR1I3-218	ENST00000503547	SP8	Q8IXZ3	490 aa		11.65	□□□□□ -0.54
NR1I3-218	ENST00000503547	XAGE3	Q8WTP9	111 aa		11.65	□□□□□ -0.54
NR1I3-218	ENST00000503547	ZNF428	Q96B54	188 aa		11.65	□□□□□ -0.54
NR1I3-218	ENST00000503547	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.65	□□□□□ -0.54
NR1I3-218	ENST00000503547	SH3TC1	Q8TE82	1336 aa		11.64	□□□□□ -0.55
NR1I3-218	ENST00000503547	CDHR2	Q9BYE9	1310 aa		11.64	□□□□□ -0.55
NR1I3-218	ENST00000503547	KIAA2012	Q0VF49	1180 aa		11.64	□□□□□ -0.55
NR1I3-218	ENST00000503547	GRAP	Q13588	217 aa		11.64	□□□□□ -0.55
NR1I3-218	ENST00000503547	NEUROD2	Q15784	382 aa		11.64	□□□□□ -0.55
NR1I3-218	ENST00000503547	FAM161A	Q3B820	660 aa		11.64	□□□□□ -0.55
NR1I3-218	ENST00000503547	LRP10	Q7Z4F1	713 aa		11.64	□□□□□ -0.55
NR1I3-218	ENST00000503547	NLRP10	Q86W26	655 aa		11.64	□□□□□ -0.55
NR1I3-218	ENST00000503547	GRAPL	Q8TC17	118 aa	Predicted RBP	11.64	□□□□□ -0.55
NR1I3-218	ENST00000503547	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.64	□□□□□ -0.55
NR1I3-218	ENST00000503547	LAS1L	Q9Y4W2	734 aa	Known RBP	11.64	□□□□□ -0.55
NR1I3-218	ENST00000503547	DUOX1	Q9NRD9	1551 aa		11.63	□□□□□ -0.55
NR1I3-218	ENST00000503547	MAP2K2	P36507	400 aa		11.63	□□□□□ -0.55
NR1I3-218	ENST00000503547	TMPO	P42166	694 aa	Known RBP	11.63	□□□□□ -0.55
NR1I3-218	ENST00000503547	SAPCD2	Q86UD0	394 aa		11.63	□□□□□ -0.55
NR1I3-218	ENST00000503547	CFAP44	Q96MT7	982 aa		11.63	□□□□□ -0.55
NR1I3-218	ENST00000503547	BABAM1	Q9NWV8	329 aa		11.63	□□□□□ -0.55
NR1I3-218	ENST00000503547	SPEF2	Q9C093	1822 aa		11.63	□□□□□ -0.55
NR1I3-218	ENST00000503547	PDE4DIP	Q5VU43	2346 aa		11.62	□□□□□ -0.55
NR1I3-218	ENST00000503547	SCN9A	Q15858	1988 aa		11.62	□□□□□ -0.55
NR1I3-218	ENST00000503547		H7C1D1	291 aa		11.62	□□□□□ -0.55
NR1I3-218	ENST00000503547	TCIRG1	Q13488	830 aa		11.62	□□□□□ -0.55
NR1I3-218	ENST00000503547	TMC4	Q7Z404	712 aa		11.62	□□□□□ -0.55
NR1I3-218	ENST00000503547	MICALL2	Q8IY33	904 aa		11.62	□□□□□ -0.55
NR1I3-218	ENST00000503547	TRPM4	Q8TD43	1214 aa		11.62	□□□□□ -0.55
NR1I3-218	ENST00000503547	CHPF2	Q9P2E5	772 aa		11.62	□□□□□ -0.55
NR1I3-218	ENST00000503547	CNOT7	Q9UIV1	285 aa	Known RBP	11.62	□□□□□ -0.55
NR1I3-218	ENST00000503547	PSME4	Q14997	1843 aa		11.61	□□□□□ -0.55
NR1I3-218	ENST00000503547	MYH3	P11055	1940 aa		11.61	□□□□□ -0.55
NR1I3-218	ENST00000503547	SHTN1	A0MZ66	631 aa		11.61	□□□□□ -0.55
NR1I3-218	ENST00000503547	CA12	O43570	354 aa		11.61	□□□□□ -0.55
NR1I3-218	ENST00000503547	KRT24	Q2M2I5	525 aa		11.61	□□□□□ -0.55
NR1I3-218	ENST00000503547	CDC37L1	Q7L3B6	337 aa		11.61	□□□□□ -0.55
NR1I3-218	ENST00000503547	CCDC146	Q8IYE0	955 aa		11.61	□□□□□ -0.55
NR1I3-218	ENST00000503547	ZC3H15	Q8WU90	426 aa	Known RBP	11.61	□□□□□ -0.55
NR1I3-218	ENST00000503547	YDJC	A8MPS7	323 aa		11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	C6orf229	H3BNL8	230 aa		11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	RIMBP2	O15034	1052 aa		11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	KCNA4	P22459	653 aa		11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	HIRA	P54198	1017 aa	Predicted RBP	11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	BRPF1	P55201	1214 aa	Predicted RBP	11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	WASHC4	Q2M389	1173 aa		11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	RTL5	Q5HYW3	569 aa	Predicted RBP	11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	HDGFL1	Q5TGJ6	251 aa		11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	DBNDD1	Q9H9R9	158 aa		11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.6	□□□□□ -0.55
NR1I3-218	ENST00000503547	ATP5J2-PTCD1	G3V325	749 aa		11.59	□□□□□ -0.55
NR1I3-218	ENST00000503547	PSMD14	O00487	310 aa		11.59	□□□□□ -0.55
NR1I3-218	ENST00000503547	HUNK	P57058	714 aa		11.59	□□□□□ -0.55
NR1I3-218	ENST00000503547	RALBP1	Q15311	655 aa		11.59	□□□□□ -0.55
NR1I3-218	ENST00000503547	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.59	□□□□□ -0.55
NR1I3-218	ENST00000503547	SAMD7	Q7Z3H4	446 aa		11.59	□□□□□ -0.55
NR1I3-218	ENST00000503547	USP48	Q86UV5	1035 aa		11.59	□□□□□ -0.55
NR1I3-218	ENST00000503547	PLBD2	Q8NHP8	589 aa		11.59	□□□□□ -0.55
NR1I3-218	ENST00000503547	FAM89A	Q96GI7	184 aa		11.59	□□□□□ -0.55
NR1I3-218	ENST00000503547	HHIPL1	Q96JK4	782 aa		11.59	□□□□□ -0.55
NR1I3-218	ENST00000503547	COL4A1	P02462	1669 aa		11.59	□□□□□ -0.55
NR1I3-218	ENST00000503547		G3V3G9	751 aa		11.58	□□□□□ -0.56
NR1I3-218	ENST00000503547	MLLT1	Q03111	559 aa	Predicted RBP	11.58	□□□□□ -0.56
NR1I3-218	ENST00000503547	WDR43	Q15061	677 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
NR1I3-218	ENST00000503547	RBM26	Q5T8P6	1007 aa	Known RBP	11.58	□□□□□ -0.56
NR1I3-218	ENST00000503547	DCAF8	Q5TAQ9	597 aa		11.58	□□□□□ -0.56
NR1I3-218	ENST00000503547	ANKRD13D	Q6ZTN6	518 aa		11.58	□□□□□ -0.56
NR1I3-218	ENST00000503547	KRT26	Q7Z3Y9	468 aa		11.58	□□□□□ -0.56
NR1I3-218	ENST00000503547	CELF1	Q92879	486 aa	Known RBP	11.58	□□□□□ -0.56
NR1I3-218	ENST00000503547	DBF4	Q9UBU7	674 aa	Predicted RBP	11.58	□□□□□ -0.56
NR1I3-218	ENST00000503547	PGAP2	Q9UHJ9	254 aa		11.58	□□□□□ -0.56
NR1I3-218	ENST00000503547	CHL1	O00533	1208 aa		11.57	□□□□□ -0.56
NR1I3-218	ENST00000503547	ECE2	O60344	883 aa		11.57	□□□□□ -0.56
NR1I3-218	ENST00000503547	GPSM2	P81274	684 aa		11.57	□□□□□ -0.56
NR1I3-218	ENST00000503547	NOG	Q13253	232 aa		11.57	□□□□□ -0.56
NR1I3-218	ENST00000503547	DGKZ	Q13574	1117 aa		11.57	□□□□□ -0.56
NR1I3-218	ENST00000503547	DOK7	Q18PE1	504 aa		11.57	□□□□□ -0.56
NR1I3-218	ENST00000503547	DPF2	Q92785	391 aa		11.57	□□□□□ -0.56
NR1I3-218	ENST00000503547	DCPS	Q96C86	337 aa	Known RBP	11.57	□□□□□ -0.56
NR1I3-218	ENST00000503547	EYA3	Q99504	573 aa		11.57	□□□□□ -0.56
NR1I3-218	ENST00000503547	MCOLN1	Q9GZU1	580 aa		11.57	□□□□□ -0.56
NR1I3-218	ENST00000503547	ADM5	C9JUS6	153 aa		11.56	□□□□□ -0.56
NR1I3-218	ENST00000503547	IRS4	O14654	1257 aa	Predicted RBP	11.56	□□□□□ -0.56

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