RNA–Protein interactions for RNA: ENST00000503402.1

SEMA6A-204, Transcript of semaphorin 6A, humanhuman

TSL 3

Gene SEMA6A, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-204ENST00000503402 PRPF40BQ6NWY9 871 aaKnown RBP9.3□□□□□ -0.92
SEMA6A-204ENST00000503402 OLFM4Q6UX06 510 aa9.3□□□□□ -0.92
SEMA6A-204ENST00000503402 ZNF496Q96IT1 587 aaPredicted RBP9.3□□□□□ -0.92
SEMA6A-204ENST00000503402 TAOK3Q9H2K8 898 aa9.3□□□□□ -0.92
SEMA6A-204ENST00000503402 ZNF541Q9H0D2 1346 aa9.3□□□□□ -0.92
SEMA6A-204ENST00000503402 SIPA1L3O60292 1781 aaPredicted RBP9.29□□□□□ -0.92
SEMA6A-204ENST00000503402 ARFGEF2Q9Y6D5 1785 aa9.29□□□□□ -0.92
SEMA6A-204ENST00000503402 CNTNAP1P78357 1384 aa9.29□□□□□ -0.92
SEMA6A-204ENST00000503402 NPHP1O15259 732 aa9.29□□□□□ -0.92
SEMA6A-204ENST00000503402 EIF5P55010 431 aaKnown RBP9.29□□□□□ -0.92
SEMA6A-204ENST00000503402 TSR1Q2NL82 804 aaKnown RBP9.29□□□□□ -0.92
SEMA6A-204ENST00000503402 TTC5Q8N0Z6 440 aa9.29□□□□□ -0.92
SEMA6A-204ENST00000503402 MRPL50Q8N5N7 158 aaKnown RBP9.29□□□□□ -0.92
SEMA6A-204ENST00000503402 HEG1Q9ULI3 1381 aa9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 MAP3K7O43318 606 aa9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 KCNQ3O43525 872 aa9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 A1BGP04217 495 aa9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 PDE6BP35913 854 aa9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 EIF4G2P78344 907 aaKnown RBP eCLIP9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 EAPPQ56P03 285 aaPredicted RBP9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 SLC51AQ86UW1 340 aa9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 CNBD1Q8NA66 436 aa9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 BRIP1Q9BX63 1249 aa9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 NBPF3Q9H094 633 aa9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 RABGEF1Q9UJ41 708 aa9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 KNSTRNQ9Y448 316 aa9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
SEMA6A-204ENST00000503402 PRAMEF22A3QJZ6 481 aa9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 GRXCR2A6NFK2 248 aa9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 FAM177BA6PVY3 158 aa9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 CAMTA2O94983 1202 aa9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 STARD3NLO95772 234 aa9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 VEGFBP49765 207 aa9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 PCGF6Q9BYE7 350 aa9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 TAF1DQ9H5J8 278 aaPredicted RBP9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 ZNF277Q9NRM2 450 aaPredicted RBP9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 PASKQ96RG2 1323 aa9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 LTBP3Q9NS15 1303 aa9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 ADAMTSL1Q8N6G6 1762 aa9.27□□□□□ -0.93
SEMA6A-204ENST00000503402 A0A087WZG4 1122 aa9.26□□□□□ -0.93
SEMA6A-204ENST00000503402 SRGNP10124 158 aa9.26□□□□□ -0.93
SEMA6A-204ENST00000503402 LBX1P52954 281 aa9.26□□□□□ -0.93
SEMA6A-204ENST00000503402 FMR1Q06787 632 aaKnown RBP eCLIP9.26□□□□□ -0.93
SEMA6A-204ENST00000503402 CC2D1BQ5T0F9 858 aaKnown RBP9.26□□□□□ -0.93
SEMA6A-204ENST00000503402 IL17REQ8NFR9 667 aa9.26□□□□□ -0.93
SEMA6A-204ENST00000503402 AIDAQ96BJ3 306 aa9.26□□□□□ -0.93
SEMA6A-204ENST00000503402 RNF123Q5XPI4 1314 aa9.26□□□□□ -0.93
SEMA6A-204ENST00000503402 U2SURPO15042 1029 aaKnown RBP9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 ST5P78524 1137 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 TEFQ10587 303 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 MAP1SQ66K74 1059 aaPredicted RBP9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 STYK1Q6J9G0 422 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 ZNF790Q6PG37 636 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 THSD4Q6ZMP0 1018 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 LDHDQ86WU2 507 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 DZIP3Q86Y13 1208 aaKnown RBP9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 KCNV2Q8TDN2 545 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 WNT2BQ93097 391 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 CNKSR1Q969H4 720 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 KIAA1468Q9P260 1216 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 SCN4AP35499 1836 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 COL4A5P29400 1685 aa9.25□□□□□ -0.93
SEMA6A-204ENST00000503402 TMEM88BA6NKF7 163 aa9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 GOLGA8CPA6NN73 597 aa9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 TRIM6-TRIM34B2RNG4 842 aa9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 DIAPH1O60610 1272 aaKnown RBP9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 ITGBL1O95965 494 aaPredicted RBP9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 HSPA8P11142 646 aaKnown RBP9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 IL6STP40189 918 aaPredicted RBP9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 CTCFP49711 727 aaPredicted RBP9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 PTPN5P54829 565 aa9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 GRM1Q13255 1194 aa9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 FAM161AQ3B820 660 aa9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 CCDC93Q567U6 631 aa9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 NBPF5PQ86XG9 351 aaPredicted RBP9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 MASTLQ96GX5 879 aa9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 PRDM10Q9NQV6 1147 aa9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 LTBP1Q14766 1721 aa9.24□□□□□ -0.93
SEMA6A-204ENST00000503402 IQCA1LA6NCM1 817 aa9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 GNAT3A8MTJ3 354 aa9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 OSBPP22059 807 aa9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 EPHX2P34913 555 aa9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 TRIM26Q12899 539 aaPredicted RBP9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 C7orf43Q8WVR3 580 aa9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 FMNL2Q96PY5 1086 aa9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 HACL1Q9UJ83 578 aa9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 ABT1Q9ULW3 272 aaKnown RBP9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 USP16Q9Y5T5 823 aa9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 KIF7Q2M1P5 1343 aa9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 ABCC12Q96J65 1359 aa9.23□□□□□ -0.93
SEMA6A-204ENST00000503402 FKBP4Q02790 459 aaKnown RBP eCLIP9.22□□□□□ -0.93
SEMA6A-204ENST00000503402 NPM2Q86SE8 214 aaKnown RBP9.22□□□□□ -0.93
SEMA6A-204ENST00000503402 ABHD8Q96I13 439 aa9.22□□□□□ -0.93
SEMA6A-204ENST00000503402 CDHR5Q9HBB8 845 aa9.22□□□□□ -0.93
SEMA6A-204ENST00000503402 WBP1LQ9NX94 342 aa9.22□□□□□ -0.93
SEMA6A-204ENST00000503402 PLA2G2EQ9NZK7 142 aa9.22□□□□□ -0.93
SEMA6A-204ENST00000503402 SEPT9Q9UHD8 586 aaPredicted RBP9.22□□□□□ -0.93
SEMA6A-204ENST00000503402 TSKSQ9UJT2 592 aa9.22□□□□□ -0.93
SEMA6A-204ENST00000503402 THSD7BQ9C0I4 1608 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms