RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 TTLL11Q8NHH1 800 aa23.12■■□□□ 1.29
ARHGEF28-205ENST00000503341 GJD4Q96KN9 370 aaPredicted RBP23.12■■□□□ 1.29
ARHGEF28-205ENST00000503341 LSG1Q9H089 658 aaKnown RBP23.12■■□□□ 1.29
ARHGEF28-205ENST00000503341 PALD1Q9ULE6 856 aa23.12■■□□□ 1.29
ARHGEF28-205ENST00000503341 HIP1O00291 1037 aa23.12■■□□□ 1.29
ARHGEF28-205ENST00000503341 IFIT5Q13325 482 aaKnown RBP23.12■■□□□ 1.29
ARHGEF28-205ENST00000503341 RAD50Q92878 1312 aa23.11■■□□□ 1.29
ARHGEF28-205ENST00000503341 HSPA4P34932 840 aa23.11■■□□□ 1.29
ARHGEF28-205ENST00000503341 CTSWP56202 376 aa23.11■■□□□ 1.29
ARHGEF28-205ENST00000503341 PTF1AQ7RTS3 328 aa23.11■■□□□ 1.29
ARHGEF28-205ENST00000503341 CCDC85AQ96PX6 553 aaPredicted RBP23.11■■□□□ 1.29
ARHGEF28-205ENST00000503341 AFF2P51816 1311 aa23.1■■□□□ 1.29
ARHGEF28-205ENST00000503341 DDIT3P35638 169 aa23.1■■□□□ 1.29
ARHGEF28-205ENST00000503341 CHMP5Q9NZZ3 219 aa23.1■■□□□ 1.29
ARHGEF28-205ENST00000503341 ST18O60284 1047 aa23.1■■□□□ 1.29
ARHGEF28-205ENST00000503341 KIAA1211Q6ZU35 1233 aa23.1■■□□□ 1.29
ARHGEF28-205ENST00000503341 LINC00116Q8NCU8 138 aa23.1■■□□□ 1.29
ARHGEF28-205ENST00000503341 PDE8AO60658 829 aa23.09■■□□□ 1.29
ARHGEF28-205ENST00000503341 TIMM10P62072 90 aa23.09■■□□□ 1.29
ARHGEF28-205ENST00000503341 SUSD4Q5VX71 490 aa23.09■■□□□ 1.29
ARHGEF28-205ENST00000503341 NEUROD6Q96NK8 337 aa23.09■■□□□ 1.29
ARHGEF28-205ENST00000503341 FSD1Q9BTV5 496 aa23.09■■□□□ 1.29
ARHGEF28-205ENST00000503341 CEP126Q9P2H0 1117 aa23.09■■□□□ 1.29
ARHGEF28-205ENST00000503341 ZNF609O15014 1411 aa23.09■■□□□ 1.29
ARHGEF28-205ENST00000503341 HAUS7Q99871 368 aa23.08■■□□□ 1.29
ARHGEF28-205ENST00000503341 GREM2Q9H772 168 aa23.08■■□□□ 1.29
ARHGEF28-205ENST00000503341 TAF7LQ5H9L4 462 aa23.08■■□□□ 1.28
ARHGEF28-205ENST00000503341 ONECUT3O60422 494 aaPredicted RBP23.07■■□□□ 1.28
ARHGEF28-205ENST00000503341 ITGA6P23229 1130 aa23.07■■□□□ 1.28
ARHGEF28-205ENST00000503341 NMIQ13287 307 aaPredicted RBP23.07■■□□□ 1.28
ARHGEF28-205ENST00000503341 EDC3Q96F86 508 aaKnown RBP23.07■■□□□ 1.28
ARHGEF28-205ENST00000503341 AK7Q96M32 723 aa23.07■■□□□ 1.28
ARHGEF28-205ENST00000503341 SNRKQ9NRH2 765 aa23.07■■□□□ 1.28
ARHGEF28-205ENST00000503341 NHSQ6T4R5 1651 aa23.07■■□□□ 1.28
ARHGEF28-205ENST00000503341 A0A1B0GUL7 405 aa23.06■■□□□ 1.28
ARHGEF28-205ENST00000503341 PARP10Q53GL7 1025 aa23.06■■□□□ 1.28
ARHGEF28-205ENST00000503341 FAM227BQ96M60 508 aa23.06■■□□□ 1.28
ARHGEF28-205ENST00000503341 MYH3P11055 1940 aa23.06■■□□□ 1.28
ARHGEF28-205ENST00000503341 ATRNO75882 1429 aa23.06■■□□□ 1.28
ARHGEF28-205ENST00000503341 ANKRD18BA2A2Z9 1011 aa23.06■■□□□ 1.28
ARHGEF28-205ENST00000503341 FRAT2O75474 233 aaPredicted RBP23.06■■□□□ 1.28
ARHGEF28-205ENST00000503341 NEK4P51957 841 aa23.06■■□□□ 1.28
ARHGEF28-205ENST00000503341 FAM182BQ5T319 152 aa23.06■■□□□ 1.28
ARHGEF28-205ENST00000503341 SH3TC1Q8TE82 1336 aa23.05■■□□□ 1.28
ARHGEF28-205ENST00000503341 CNTNAP4Q9C0A0 1308 aa23.05■■□□□ 1.28
ARHGEF28-205ENST00000503341 HSP90AA1P07900 732 aaKnown RBP23.05■■□□□ 1.28
ARHGEF28-205ENST00000503341 KCNQ4P56696 695 aa23.05■■□□□ 1.28
ARHGEF28-205ENST00000503341 UTP14AQ9BVJ6 771 aaKnown RBP23.05■■□□□ 1.28
ARHGEF28-205ENST00000503341 AKAP2Q9Y2D5 859 aa23.05■■□□□ 1.28
ARHGEF28-205ENST00000503341 RIPOR2Q9Y4F9 1068 aa23.05■■□□□ 1.28
ARHGEF28-205ENST00000503341 BTAF1O14981 1849 aa23.05■■□□□ 1.28
ARHGEF28-205ENST00000503341 PTH1RQ03431 593 aa23.04■■□□□ 1.28
ARHGEF28-205ENST00000503341 TRPC5Q9UL62 973 aaPredicted RBP23.04■■□□□ 1.28
ARHGEF28-205ENST00000503341 DNAJC2Q99543 621 aaKnown RBP23.04■■□□□ 1.28
ARHGEF28-205ENST00000503341 NDUFB9Q9Y6M9 179 aa23.04■■□□□ 1.28
ARHGEF28-205ENST00000503341 RFX7Q2KHR2 1363 aa23.03■■□□□ 1.28
ARHGEF28-205ENST00000503341 A0A0D9SFI3 127 aa23.03■■□□□ 1.28
ARHGEF28-205ENST00000503341 LDHAL6AQ6ZMR3 332 aa23.03■■□□□ 1.28
ARHGEF28-205ENST00000503341 CIZ1Q9ULV3 898 aaPredicted RBP23.03■■□□□ 1.28
ARHGEF28-205ENST00000503341 NIP7Q9Y221 180 aaKnown RBP eCLIP23.03■■□□□ 1.28
ARHGEF28-205ENST00000503341 CLEC4GQ6UXB4 293 aa23.02■■□□□ 1.28
ARHGEF28-205ENST00000503341 ZNF652Q9Y2D9 606 aa23.02■■□□□ 1.28
ARHGEF28-205ENST00000503341 SNX14Q9Y5W7 946 aa23.02■■□□□ 1.28
ARHGEF28-205ENST00000503341 BCORQ6W2J9 1755 aa23.02■■□□□ 1.28
ARHGEF28-205ENST00000503341 RC3H1Q5TC82 1133 aaKnown RBP23.02■■□□□ 1.28
ARHGEF28-205ENST00000503341 IL27Q8NEV9 243 aa23.02■■□□□ 1.28
ARHGEF28-205ENST00000503341 FOXD4L1Q9NU39 408 aa23.02■■□□□ 1.28
ARHGEF28-205ENST00000503341 CCDC171Q6TFL3 1326 aa23.01■■□□□ 1.27
ARHGEF28-205ENST00000503341 RIC1Q4ADV7 1423 aa23.01■■□□□ 1.27
ARHGEF28-205ENST00000503341 FAM177BA6PVY3 158 aa23.01■■□□□ 1.27
ARHGEF28-205ENST00000503341 NTSR2O95665 410 aa23.01■■□□□ 1.27
ARHGEF28-205ENST00000503341 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.01■■□□□ 1.27
ARHGEF28-205ENST00000503341 MED23Q9ULK4 1368 aa23.01■■□□□ 1.27
ARHGEF28-205ENST00000503341 HCLS1P14317 486 aaPredicted RBP23■■□□□ 1.27
ARHGEF28-205ENST00000503341 MCM2P49736 904 aa23■■□□□ 1.27
ARHGEF28-205ENST00000503341 SEPT12Q8IYM1 358 aa23■■□□□ 1.27
ARHGEF28-205ENST00000503341 RASEFQ8IZ41 740 aa23■■□□□ 1.27
ARHGEF28-205ENST00000503341 DDX46Q7L014 1031 aaKnown RBP23■■□□□ 1.27
ARHGEF28-205ENST00000503341 KBTBD3Q8NAB2 608 aa23■■□□□ 1.27
ARHGEF28-205ENST00000503341 KCNB2Q92953 911 aa23■■□□□ 1.27
ARHGEF28-205ENST00000503341 XAGE2Q96GT9 111 aa23■■□□□ 1.27
ARHGEF28-205ENST00000503341 METTL24Q5JXM2 366 aa22.99■■□□□ 1.27
ARHGEF28-205ENST00000503341 MAP4K1Q92918 833 aa22.99■■□□□ 1.27
ARHGEF28-205ENST00000503341 CNNM1Q9NRU3 951 aa22.99■■□□□ 1.27
ARHGEF28-205ENST00000503341 PAG1Q9NWQ8 432 aa22.99■■□□□ 1.27
ARHGEF28-205ENST00000503341 RGL2O15211 777 aa22.98■■□□□ 1.27
ARHGEF28-205ENST00000503341 IFIT1P09914 478 aaKnown RBP22.98■■□□□ 1.27
ARHGEF28-205ENST00000503341 NECTIN1Q15223 517 aa22.98■■□□□ 1.27
ARHGEF28-205ENST00000503341 RPS6KA4O75676 772 aa22.98■■□□□ 1.27
ARHGEF28-205ENST00000503341 ADORA1P30542 326 aa22.98■■□□□ 1.27
ARHGEF28-205ENST00000503341 CCDC158Q5M9N0 1113 aa22.98■■□□□ 1.27
ARHGEF28-205ENST00000503341 TICAM2Q86XR7 235 aa22.98■■□□□ 1.27
ARHGEF28-205ENST00000503341 UPF3BQ9BZI7 483 aaKnown RBP22.98■■□□□ 1.27
ARHGEF28-205ENST00000503341 CCNL1Q9UK58 526 aaPredicted RBP22.98■■□□□ 1.27
ARHGEF28-205ENST00000503341 GOLIM4O00461 696 aa22.97■■□□□ 1.27
ARHGEF28-205ENST00000503341 HSP90B1P14625 803 aaKnown RBP22.97■■□□□ 1.27
ARHGEF28-205ENST00000503341 SBF2Q86WG5 1849 aa22.97■■□□□ 1.27
ARHGEF28-205ENST00000503341 DDX60Q8IY21 1712 aaKnown RBP22.97■■□□□ 1.27
ARHGEF28-205ENST00000503341 VGLL2Q8N8G2 317 aa22.97■■□□□ 1.27
ARHGEF28-205ENST00000503341 ATP2B3Q16720 1220 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms