RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 FER1L6Q2WGJ9 1857 aa13.59□□□□□ -0.23
UBE2D3-212ENST00000502563 MYH3P11055 1940 aa13.59□□□□□ -0.23
UBE2D3-212ENST00000502563 F6X3S4 739 aa13.59□□□□□ -0.23
UBE2D3-212ENST00000502563 GRM8O00222 908 aa13.59□□□□□ -0.23
UBE2D3-212ENST00000502563 CCT4P50991 539 aaKnown RBP13.59□□□□□ -0.23
UBE2D3-212ENST00000502563 CCDC24Q8N4L8 307 aa13.59□□□□□ -0.23
UBE2D3-212ENST00000502563 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
UBE2D3-212ENST00000502563 SLX4Q8IY92 1834 aa13.59□□□□□ -0.23
UBE2D3-212ENST00000502563 ABCC4O15439 1325 aa13.59□□□□□ -0.23
UBE2D3-212ENST00000502563 HCLS1P14317 486 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-212ENST00000502563 GRAPQ13588 217 aa13.58□□□□□ -0.24
UBE2D3-212ENST00000502563 POLA2Q14181 598 aa13.58□□□□□ -0.24
UBE2D3-212ENST00000502563 CCDC152Q4G0S7 254 aa13.58□□□□□ -0.24
UBE2D3-212ENST00000502563 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
UBE2D3-212ENST00000502563 C3orf67Q6ZVT6 689 aa13.58□□□□□ -0.24
UBE2D3-212ENST00000502563 GRAPLQ8TC17 118 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-212ENST00000502563 LRRC37AA6NMS7 1700 aa13.58□□□□□ -0.24
UBE2D3-212ENST00000502563 CSF1RP07333 972 aa13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 CTSWP56202 376 aa13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 CCDC93Q567U6 631 aa13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 INTS3Q68E01 1043 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 ATF7IPQ6VMQ6 1270 aa13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 DDX46Q7L014 1031 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 RTKN2Q8IZC4 609 aa13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 SYNE4Q8N205 404 aa13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 PSMD1Q99460 953 aa13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 BCL2L13Q9BXK5 485 aa13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 VPS33BQ9H267 617 aa13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 NOB1Q9ULX3 412 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 HDAC5Q9UQL6 1122 aa13.57□□□□□ -0.24
UBE2D3-212ENST00000502563 UBE3BQ7Z3V4 1068 aa13.56□□□□□ -0.24
UBE2D3-212ENST00000502563 TTLL11Q8NHH1 800 aa13.56□□□□□ -0.24
UBE2D3-212ENST00000502563 ATP6V0A2Q9Y487 856 aa13.56□□□□□ -0.24
UBE2D3-212ENST00000502563 TRIM27P14373 513 aa13.55□□□□□ -0.24
UBE2D3-212ENST00000502563 ZKSCAN2Q63HK3 967 aa13.55□□□□□ -0.24
UBE2D3-212ENST00000502563 SLC4A10Q6U841 1118 aa13.55□□□□□ -0.24
UBE2D3-212ENST00000502563 SP8Q8IXZ3 490 aa13.55□□□□□ -0.24
UBE2D3-212ENST00000502563 PELP1Q8IZL8 1130 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-212ENST00000502563 NFKBIEO00221 500 aa13.54□□□□□ -0.24
UBE2D3-212ENST00000502563 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-212ENST00000502563 BCAR3O75815 825 aa13.54□□□□□ -0.24
UBE2D3-212ENST00000502563 RABL6Q3YEC7 729 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-212ENST00000502563 CDC5LQ99459 802 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-212ENST00000502563 RTFDC1Q9BY42 306 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-212ENST00000502563 USP44Q9H0E7 712 aa13.54□□□□□ -0.24
UBE2D3-212ENST00000502563 TAOK3Q9H2K8 898 aa13.54□□□□□ -0.24
UBE2D3-212ENST00000502563 C9orf78Q9NZ63 289 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-212ENST00000502563 SBF1O95248 1867 aa13.54□□□□□ -0.24
UBE2D3-212ENST00000502563 C21orf2O43822 256 aa13.53□□□□□ -0.24
UBE2D3-212ENST00000502563 MS4A1P11836 297 aa13.53□□□□□ -0.24
UBE2D3-212ENST00000502563 LMNB1P20700 586 aa13.53□□□□□ -0.24
UBE2D3-212ENST00000502563 RPS8P62241 208 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-212ENST00000502563 FKBP4Q02790 459 aaKnown RBP eCLIP13.53□□□□□ -0.24
UBE2D3-212ENST00000502563 TMX4Q9H1E5 349 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-212ENST00000502563 CACNA1SQ13698 1873 aa13.53□□□□□ -0.24
UBE2D3-212ENST00000502563 MYCNP04198 464 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-212ENST00000502563 FOXO4P98177 505 aa13.52□□□□□ -0.25
UBE2D3-212ENST00000502563 ARHGAP27Q6ZUM4 889 aa13.52□□□□□ -0.25
UBE2D3-212ENST00000502563 BSDC1Q9NW68 430 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-212ENST00000502563 PODXL2Q9NZ53 605 aa13.52□□□□□ -0.25
UBE2D3-212ENST00000502563 LTBP1Q14766 1721 aa13.52□□□□□ -0.25
UBE2D3-212ENST00000502563 DICER1Q9UPY3 1922 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-212ENST00000502563 NBPF7P0C2Y1 421 aaPredicted RBP13.51□□□□□ -0.25
UBE2D3-212ENST00000502563 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
UBE2D3-212ENST00000502563 SUPT20HQ8NEM7 779 aa13.51□□□□□ -0.25
UBE2D3-212ENST00000502563 RCAN3Q9UKA8 241 aa13.51□□□□□ -0.25
UBE2D3-212ENST00000502563 GNAI3P08754 354 aa13.5□□□□□ -0.25
UBE2D3-212ENST00000502563 ANKRD18AQ8IVF6 992 aa13.5□□□□□ -0.25
UBE2D3-212ENST00000502563 CELF1Q92879 486 aaKnown RBP13.5□□□□□ -0.25
UBE2D3-212ENST00000502563 KAZALD1Q96I82 304 aa13.5□□□□□ -0.25
UBE2D3-212ENST00000502563 GREM2Q9H772 168 aa13.5□□□□□ -0.25
UBE2D3-212ENST00000502563 ITGA6P23229 1130 aa13.49□□□□□ -0.25
UBE2D3-212ENST00000502563 DZIP1LQ8IYY4 767 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-212ENST00000502563 WWC3Q9ULE0 1092 aa13.49□□□□□ -0.25
UBE2D3-212ENST00000502563 ANKRD18BA2A2Z9 1011 aa13.48□□□□□ -0.25
UBE2D3-212ENST00000502563 YY1P25490 414 aa13.48□□□□□ -0.25
UBE2D3-212ENST00000502563 IFIT5Q13325 482 aaKnown RBP13.48□□□□□ -0.25
UBE2D3-212ENST00000502563 MTX1Q13505 466 aa13.48□□□□□ -0.25
UBE2D3-212ENST00000502563 FRAT1Q92837 279 aaPredicted RBP13.48□□□□□ -0.25
UBE2D3-212ENST00000502563 SUCLG2Q96I99 432 aa13.48□□□□□ -0.25
UBE2D3-212ENST00000502563 SEC31BQ9NQW1 1179 aa13.48□□□□□ -0.25
UBE2D3-212ENST00000502563 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
UBE2D3-212ENST00000502563 DUOX1Q9NRD9 1551 aa13.48□□□□□ -0.25
UBE2D3-212ENST00000502563 COL4A1P02462 1669 aa13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 UBTFL1P0CB47 393 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 IGHMBP2P38935 993 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 PRELPP51888 382 aa13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 PDE3AQ14432 1141 aa13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 CCDC57Q2TAC2 916 aa13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 C9orf131Q5VYM1 1079 aa13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 LMBR1LQ6UX01 489 aa13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 FTSJ3Q8IY81 847 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 MPNDQ8N594 471 aa13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 JARID2Q92833 1246 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-212ENST00000502563 TAF1P21675 1872 aa13.46□□□□□ -0.25
UBE2D3-212ENST00000502563 XDHP47989 1333 aa13.46□□□□□ -0.25
UBE2D3-212ENST00000502563 IARSP41252 1262 aaKnown RBP13.46□□□□□ -0.25
UBE2D3-212ENST00000502563 RASSF7Q02833 373 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms