RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 NBPF5PQ86XG9 351 aaPredicted RBP16.65■□□□□ 0.26
SGCA-203ENST00000502555 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
SGCA-203ENST00000502555 TPTE2Q6XPS3 522 aa16.64■□□□□ 0.25
SGCA-203ENST00000502555 NUTM1Q86Y26 1132 aa16.64■□□□□ 0.25
SGCA-203ENST00000502555 PLEKHM2Q8IWE5 1019 aa16.64■□□□□ 0.25
SGCA-203ENST00000502555 CLASRPQ8N2M8 674 aaKnown RBP16.64■□□□□ 0.25
SGCA-203ENST00000502555 KLHDC4Q8TBB5 520 aa16.64■□□□□ 0.25
SGCA-203ENST00000502555 SALL3Q9BXA9 1300 aa16.63■□□□□ 0.25
SGCA-203ENST00000502555 ANKRD18BA2A2Z9 1011 aa16.63■□□□□ 0.25
SGCA-203ENST00000502555 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
SGCA-203ENST00000502555 IL15P40933 162 aaPredicted RBP16.63■□□□□ 0.25
SGCA-203ENST00000502555 ERFEQ4G0M1 354 aa16.63■□□□□ 0.25
SGCA-203ENST00000502555 CCDC152Q4G0S7 254 aa16.63■□□□□ 0.25
SGCA-203ENST00000502555 SIL1Q9H173 461 aa16.63■□□□□ 0.25
SGCA-203ENST00000502555 OSBPL3Q9H4L5 887 aa16.63■□□□□ 0.25
SGCA-203ENST00000502555 GREM2Q9H772 168 aa16.63■□□□□ 0.25
SGCA-203ENST00000502555 STK32BQ9NY57 414 aa16.63■□□□□ 0.25
SGCA-203ENST00000502555 RIC1Q4ADV7 1423 aa16.63■□□□□ 0.25
SGCA-203ENST00000502555 AOX1Q06278 1338 aa16.62■□□□□ 0.25
SGCA-203ENST00000502555 PNPLA7Q6ZV29 1317 aa16.62■□□□□ 0.25
SGCA-203ENST00000502555 EYA2O00167 538 aa16.62■□□□□ 0.25
SGCA-203ENST00000502555 SASH1O94885 1247 aa16.62■□□□□ 0.25
SGCA-203ENST00000502555 ITGA6P23229 1130 aa16.62■□□□□ 0.25
SGCA-203ENST00000502555 BMP2KLQ5H9B9 411 aa16.62■□□□□ 0.25
SGCA-203ENST00000502555 TAF7LQ5H9L4 462 aa16.62■□□□□ 0.25
SGCA-203ENST00000502555 COL23A1Q86Y22 540 aaPredicted RBP16.62■□□□□ 0.25
SGCA-203ENST00000502555 C16orf71Q8IYS4 520 aaPredicted RBP16.62■□□□□ 0.25
SGCA-203ENST00000502555 IL1RAPL2Q9NP60 686 aa16.62■□□□□ 0.25
SGCA-203ENST00000502555 DDX60Q8IY21 1712 aaKnown RBP16.61■□□□□ 0.25
SGCA-203ENST00000502555 ABCC12Q96J65 1359 aa16.61■□□□□ 0.25
SGCA-203ENST00000502555 LRP5O75197 1615 aa16.61■□□□□ 0.25
SGCA-203ENST00000502555 MX1P20591 662 aa16.61■□□□□ 0.25
SGCA-203ENST00000502555 TM4SF1P30408 202 aa16.61■□□□□ 0.25
SGCA-203ENST00000502555 SF3B3Q15393 1217 aaKnown RBP16.61■□□□□ 0.25
SGCA-203ENST00000502555 SLC15A2Q16348 729 aa16.61■□□□□ 0.25
SGCA-203ENST00000502555 NLGN1Q8N2Q7 840 aa16.61■□□□□ 0.25
SGCA-203ENST00000502555 OTUD7AQ8TE49 926 aaPredicted RBP16.61■□□□□ 0.25
SGCA-203ENST00000502555 ANO8Q9HCE9 1232 aaPredicted RBP16.61■□□□□ 0.25
SGCA-203ENST00000502555 STAP2Q9UGK3 403 aa16.61■□□□□ 0.25
SGCA-203ENST00000502555 MYH3P11055 1940 aa16.6■□□□□ 0.25
SGCA-203ENST00000502555 PDE1AP54750 535 aa16.6■□□□□ 0.25
SGCA-203ENST00000502555 DEFB132Q7Z7B7 95 aa16.6■□□□□ 0.25
SGCA-203ENST00000502555 CNBD1Q8NA66 436 aa16.6■□□□□ 0.25
SGCA-203ENST00000502555 CCDC85AQ96PX6 553 aaPredicted RBP16.6■□□□□ 0.25
SGCA-203ENST00000502555 TUBGCP6Q96RT7 1819 aa16.6■□□□□ 0.25
SGCA-203ENST00000502555 NPHP1O15259 732 aa16.59■□□□□ 0.25
SGCA-203ENST00000502555 MSH5O43196 834 aa16.59■□□□□ 0.25
SGCA-203ENST00000502555 TTC22Q5TAA0 569 aa16.59■□□□□ 0.25
SGCA-203ENST00000502555 ATG9AQ7Z3C6 839 aa16.59■□□□□ 0.25
SGCA-203ENST00000502555 ZNF594Q96JF6 807 aaPredicted RBP16.59■□□□□ 0.25
SGCA-203ENST00000502555 GPR108Q9NPR9 543 aa16.59■□□□□ 0.25
SGCA-203ENST00000502555 IFIT2P09913 472 aaKnown RBP16.58■□□□□ 0.24
SGCA-203ENST00000502555 AACSQ86V21 672 aa16.58■□□□□ 0.24
SGCA-203ENST00000502555 GPATCH3Q96I76 525 aa16.58■□□□□ 0.24
SGCA-203ENST00000502555 NLRP3Q96P20 1036 aa16.58■□□□□ 0.24
SGCA-203ENST00000502555 BCL11AQ9H165 835 aa16.58■□□□□ 0.24
SGCA-203ENST00000502555 QSER1Q2KHR3 1735 aa16.58■□□□□ 0.24
SGCA-203ENST00000502555 TTC41PQ6P2S7 1318 aa16.57■□□□□ 0.24
SGCA-203ENST00000502555 POLRMTO00411 1230 aaKnown RBP16.57■□□□□ 0.24
SGCA-203ENST00000502555 SERPINB2P05120 415 aa16.57■□□□□ 0.24
SGCA-203ENST00000502555 ST5P78524 1137 aa16.57■□□□□ 0.24
SGCA-203ENST00000502555 DDR1Q08345 913 aa16.57■□□□□ 0.24
SGCA-203ENST00000502555 TFCP2Q12800 502 aa16.57■□□□□ 0.24
SGCA-203ENST00000502555 LRRC24Q50LG9 513 aa16.57■□□□□ 0.24
SGCA-203ENST00000502555 PRR5LQ6MZQ0 368 aa16.57■□□□□ 0.24
SGCA-203ENST00000502555 CDC5LQ99459 802 aaKnown RBP16.57■□□□□ 0.24
SGCA-203ENST00000502555 C8orf34Q49A92 452 aa16.56■□□□□ 0.24
SGCA-203ENST00000502555 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
SGCA-203ENST00000502555 LDHAL6AQ6ZMR3 332 aa16.56■□□□□ 0.24
SGCA-203ENST00000502555 EAF2Q96CJ1 260 aaPredicted RBP16.56■□□□□ 0.24
SGCA-203ENST00000502555 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
SGCA-203ENST00000502555 PUS3Q9BZE2 481 aaKnown RBP16.56■□□□□ 0.24
SGCA-203ENST00000502555 CEP126Q9P2H0 1117 aa16.56■□□□□ 0.24
SGCA-203ENST00000502555 FPGT-TNNI3KV9GXZ4 949 aa16.56■□□□□ 0.24
SGCA-203ENST00000502555 GSPT1P15170 499 aaKnown RBP16.55■□□□□ 0.24
SGCA-203ENST00000502555 IGHMBP2P38935 993 aaKnown RBP16.55■□□□□ 0.24
SGCA-203ENST00000502555 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
SGCA-203ENST00000502555 CNNM1Q9NRU3 951 aa16.55■□□□□ 0.24
SGCA-203ENST00000502555 AKAP2Q9Y2D5 859 aa16.55■□□□□ 0.24
SGCA-203ENST00000502555 RIPOR2Q9Y4F9 1068 aa16.55■□□□□ 0.24
SGCA-203ENST00000502555 ERC2O15083 957 aa16.54■□□□□ 0.24
SGCA-203ENST00000502555 MPHOSPH8Q99549 860 aa16.54■□□□□ 0.24
SGCA-203ENST00000502555 TSHZ2Q9NRE2 1034 aa16.54■□□□□ 0.24
SGCA-203ENST00000502555 ECHDC1Q9NTX5 307 aa16.54■□□□□ 0.24
SGCA-203ENST00000502555 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.54■□□□□ 0.24
SGCA-203ENST00000502555 ZNF609O15014 1411 aa16.54■□□□□ 0.24
SGCA-203ENST00000502555 MROH5Q6ZUA9 1318 aa16.54■□□□□ 0.24
SGCA-203ENST00000502555 GLRX3O76003 335 aaKnown RBP16.53■□□□□ 0.24
SGCA-203ENST00000502555 METTL24Q5JXM2 366 aa16.53■□□□□ 0.24
SGCA-203ENST00000502555 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
SGCA-203ENST00000502555 PI4K2BQ8TCG2 481 aa16.53■□□□□ 0.24
SGCA-203ENST00000502555 SEC31BQ9NQW1 1179 aa16.53■□□□□ 0.24
SGCA-203ENST00000502555 PARP3Q9Y6F1 533 aa16.52■□□□□ 0.24
SGCA-203ENST00000502555 TNRC6CQ9HCJ0 1690 aaKnown RBP16.52■□□□□ 0.23
SGCA-203ENST00000502555 MMP10P09238 476 aa16.51■□□□□ 0.23
SGCA-203ENST00000502555 CRY2Q49AN0 593 aa16.51■□□□□ 0.23
SGCA-203ENST00000502555 TSHZ3Q63HK5 1081 aa16.51■□□□□ 0.23
SGCA-203ENST00000502555 DDX46Q7L014 1031 aaKnown RBP16.51■□□□□ 0.23
SGCA-203ENST00000502555 VGLL2Q8N8G2 317 aa16.51■□□□□ 0.23
SGCA-203ENST00000502555 CCDC8Q9H0W5 538 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms