RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 NIP7Q9Y221 180 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC01550-202ENST00000502187 CDHR2Q9BYE9 1310 aa11.19□□□□□ -0.62
LINC01550-202ENST00000502187 PDE4AP27815 886 aa11.18□□□□□ -0.62
LINC01550-202ENST00000502187 ZNF827Q17R98 1081 aa11.18□□□□□ -0.62
LINC01550-202ENST00000502187 HSP90AB4PQ58FF6 505 aa11.18□□□□□ -0.62
LINC01550-202ENST00000502187 FAM89AQ96GI7 184 aa11.18□□□□□ -0.62
LINC01550-202ENST00000502187 SRP68Q9UHB9 627 aaKnown RBP11.18□□□□□ -0.62
LINC01550-202ENST00000502187 COL24A1Q17RW2 1714 aa11.18□□□□□ -0.62
LINC01550-202ENST00000502187 USPL1Q5W0Q7 1092 aa11.18□□□□□ -0.62
LINC01550-202ENST00000502187 LRRCC1Q9C099 1032 aa11.18□□□□□ -0.62
LINC01550-202ENST00000502187 CHMP3Q9Y3E7 222 aa11.18□□□□□ -0.62
LINC01550-202ENST00000502187 TUBGCP6Q96RT7 1819 aa11.18□□□□□ -0.62
LINC01550-202ENST00000502187 FAM177BA6PVY3 158 aa11.17□□□□□ -0.62
LINC01550-202ENST00000502187 RAB11FIP3O75154 756 aa11.17□□□□□ -0.62
LINC01550-202ENST00000502187 FOXO4P98177 505 aa11.17□□□□□ -0.62
LINC01550-202ENST00000502187 OS9Q13438 667 aaPredicted RBP11.17□□□□□ -0.62
LINC01550-202ENST00000502187 LMBR1LQ6UX01 489 aa11.17□□□□□ -0.62
LINC01550-202ENST00000502187 BICDL1Q6ZP65 573 aa11.17□□□□□ -0.62
LINC01550-202ENST00000502187 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
LINC01550-202ENST00000502187 UPF1Q92900 1129 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC01550-202ENST00000502187 DDX60Q8IY21 1712 aaKnown RBP11.17□□□□□ -0.62
LINC01550-202ENST00000502187 IL27Q8NEV9 243 aa11.17□□□□□ -0.62
LINC01550-202ENST00000502187 AKT1S1Q96B36 256 aa11.17□□□□□ -0.62
LINC01550-202ENST00000502187 UTP14AQ9BVJ6 771 aaKnown RBP11.17□□□□□ -0.62
LINC01550-202ENST00000502187 PLA2G12BQ9BX93 195 aa11.17□□□□□ -0.62
LINC01550-202ENST00000502187 BCL11AQ9H165 835 aa11.17□□□□□ -0.62
LINC01550-202ENST00000502187 NOP58Q9Y2X3 529 aaKnown RBP11.17□□□□□ -0.62
LINC01550-202ENST00000502187 USP42Q9H9J4 1324 aaKnown RBP11.17□□□□□ -0.62
LINC01550-202ENST00000502187 SH3TC1Q8TE82 1336 aa11.16□□□□□ -0.62
LINC01550-202ENST00000502187 SMARCA5O60264 1052 aaPredicted RBP11.16□□□□□ -0.62
LINC01550-202ENST00000502187 SSFA2P28290 1259 aa11.16□□□□□ -0.62
LINC01550-202ENST00000502187 SUSD4Q5VX71 490 aa11.16□□□□□ -0.62
LINC01550-202ENST00000502187 PA2G4Q9UQ80 394 aaKnown RBP11.16□□□□□ -0.62
LINC01550-202ENST00000502187 CASZ1Q86V15 1759 aa11.16□□□□□ -0.62
LINC01550-202ENST00000502187 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
LINC01550-202ENST00000502187 ERC1Q8IUD2 1116 aa11.16□□□□□ -0.62
LINC01550-202ENST00000502187 KIF1BPQ96EK5 621 aa11.16□□□□□ -0.62
LINC01550-202ENST00000502187 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
LINC01550-202ENST00000502187 STK32BQ9NY57 414 aa11.16□□□□□ -0.62
LINC01550-202ENST00000502187 G3BP1Q13283 466 aaKnown RBP eCLIP11.15□□□□□ -0.62
LINC01550-202ENST00000502187 RHPN1Q8TCX5 695 aa11.15□□□□□ -0.62
LINC01550-202ENST00000502187 ANO8Q9HCE9 1232 aaPredicted RBP11.15□□□□□ -0.62
LINC01550-202ENST00000502187 NTSR2O95665 410 aa11.15□□□□□ -0.62
LINC01550-202ENST00000502187 SLC15A2Q16348 729 aa11.15□□□□□ -0.62
LINC01550-202ENST00000502187 TBC1D9BQ66K14 1250 aa11.15□□□□□ -0.62
LINC01550-202ENST00000502187 COL23A1Q86Y22 540 aaPredicted RBP11.15□□□□□ -0.62
LINC01550-202ENST00000502187 COPRSQ9NQ92 184 aa11.15□□□□□ -0.62
LINC01550-202ENST00000502187 PDE8AO60658 829 aa11.14□□□□□ -0.63
LINC01550-202ENST00000502187 HSP90B1P14625 803 aaKnown RBP11.14□□□□□ -0.63
LINC01550-202ENST00000502187 RFX5P48382 616 aaPredicted RBP11.14□□□□□ -0.63
LINC01550-202ENST00000502187 SYNE4Q8N205 404 aa11.14□□□□□ -0.63
LINC01550-202ENST00000502187 KCTD17Q8N5Z5 321 aa11.14□□□□□ -0.63
LINC01550-202ENST00000502187 SIL1Q9H173 461 aa11.14□□□□□ -0.63
LINC01550-202ENST00000502187 CTSWP56202 376 aa11.14□□□□□ -0.63
LINC01550-202ENST00000502187 PTPN12Q05209 780 aaKnown RBP11.14□□□□□ -0.63
LINC01550-202ENST00000502187 KLHDC4Q8TBB5 520 aa11.14□□□□□ -0.63
LINC01550-202ENST00000502187 SETDB2Q96T68 719 aa11.14□□□□□ -0.63
LINC01550-202ENST00000502187 CCDC57Q2TAC2 916 aa11.13□□□□□ -0.63
LINC01550-202ENST00000502187 IL1RAPL2Q9NP60 686 aa11.13□□□□□ -0.63
LINC01550-202ENST00000502187 CSF1RP07333 972 aa11.13□□□□□ -0.63
LINC01550-202ENST00000502187 MKRN3Q13064 507 aaKnown RBP11.13□□□□□ -0.63
LINC01550-202ENST00000502187 FAM161AQ3B820 660 aa11.13□□□□□ -0.63
LINC01550-202ENST00000502187 PLEKHM2Q8IWE5 1019 aa11.13□□□□□ -0.63
LINC01550-202ENST00000502187 C16orf71Q8IYS4 520 aaPredicted RBP11.13□□□□□ -0.63
LINC01550-202ENST00000502187 FLAD1Q8NFF5 587 aa11.13□□□□□ -0.63
LINC01550-202ENST00000502187 NYXQ9GZU5 481 aa11.13□□□□□ -0.63
LINC01550-202ENST00000502187 DCAF8L1A6NGE4 600 aa11.12□□□□□ -0.63
LINC01550-202ENST00000502187 STK25O00506 426 aa11.12□□□□□ -0.63
LINC01550-202ENST00000502187 GTF2E1P29083 439 aaPredicted RBP11.12□□□□□ -0.63
LINC01550-202ENST00000502187 NUTM1Q86Y26 1132 aa11.12□□□□□ -0.63
LINC01550-202ENST00000502187 TTLL11Q8NHH1 800 aa11.12□□□□□ -0.63
LINC01550-202ENST00000502187 CCDC85AQ96PX6 553 aaPredicted RBP11.12□□□□□ -0.63
LINC01550-202ENST00000502187 CARMIL3Q8ND23 1372 aa11.12□□□□□ -0.63
LINC01550-202ENST00000502187 QSER1Q2KHR3 1735 aa11.12□□□□□ -0.63
LINC01550-202ENST00000502187 GYS1P13807 737 aa11.12□□□□□ -0.63
LINC01550-202ENST00000502187 HCLS1P14317 486 aaPredicted RBP11.12□□□□□ -0.63
LINC01550-202ENST00000502187 IFIT5Q13325 482 aaKnown RBP11.12□□□□□ -0.63
LINC01550-202ENST00000502187 TAF7LQ5H9L4 462 aa11.12□□□□□ -0.63
LINC01550-202ENST00000502187 CLASRPQ8N2M8 674 aaKnown RBP11.12□□□□□ -0.63
LINC01550-202ENST00000502187 OTUD7AQ8TE49 926 aaPredicted RBP11.12□□□□□ -0.63
LINC01550-202ENST00000502187 PNPLA7Q6ZV29 1317 aa11.11□□□□□ -0.63
LINC01550-202ENST00000502187 SPEF2Q9C093 1822 aa11.11□□□□□ -0.63
LINC01550-202ENST00000502187 NBPF5PQ86XG9 351 aaPredicted RBP11.11□□□□□ -0.63
LINC01550-202ENST00000502187 ANKRD18BA2A2Z9 1011 aa11.11□□□□□ -0.63
LINC01550-202ENST00000502187 NPHP1O15259 732 aa11.11□□□□□ -0.63
LINC01550-202ENST00000502187 MX1P20591 662 aa11.11□□□□□ -0.63
LINC01550-202ENST00000502187 GREM2Q9H772 168 aa11.11□□□□□ -0.63
LINC01550-202ENST00000502187 AK9Q5TCS8 1911 aa11.1□□□□□ -0.63
LINC01550-202ENST00000502187 SASH1O94885 1247 aa11.1□□□□□ -0.63
LINC01550-202ENST00000502187 ITGA6P23229 1130 aa11.1□□□□□ -0.63
LINC01550-202ENST00000502187 NFIXQ14938 502 aa11.1□□□□□ -0.63
LINC01550-202ENST00000502187 ERFEQ4G0M1 354 aa11.1□□□□□ -0.63
LINC01550-202ENST00000502187 BMP2KLQ5H9B9 411 aa11.1□□□□□ -0.63
LINC01550-202ENST00000502187 MSL1Q68DK7 614 aa11.1□□□□□ -0.63
LINC01550-202ENST00000502187 CCDC24Q8N4L8 307 aa11.1□□□□□ -0.63
LINC01550-202ENST00000502187 ZNF594Q96JF6 807 aaPredicted RBP11.1□□□□□ -0.63
LINC01550-202ENST00000502187 PDGFDQ9GZP0 370 aaPredicted RBP11.1□□□□□ -0.63
LINC01550-202ENST00000502187 LRP5O75197 1615 aa11.1□□□□□ -0.63
LINC01550-202ENST00000502187 SALL3Q9BXA9 1300 aa11.1□□□□□ -0.63
LINC01550-202ENST00000502187 ABCC12Q96J65 1359 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms