RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 TRMT2AQ8IZ69 625 aaKnown RBP21.8■■□□□ 1.08
AP004609.1-201ENST00000498872 TSR2Q969E8 191 aaKnown RBP21.8■■□□□ 1.08
AP004609.1-201ENST00000498872 HACL1Q9UJ83 578 aa21.8■■□□□ 1.08
AP004609.1-201ENST00000498872 NCBP3Q53F19 620 aaKnown RBP21.8■■□□□ 1.08
AP004609.1-201ENST00000498872 DDX46Q7L014 1031 aaKnown RBP21.8■■□□□ 1.08
AP004609.1-201ENST00000498872 RIC3Q7Z5B4 369 aa21.8■■□□□ 1.08
AP004609.1-201ENST00000498872 GPC2Q8N158 579 aa21.8■■□□□ 1.08
AP004609.1-201ENST00000498872 PPIP5K2O43314 1243 aa21.79■■□□□ 1.08
AP004609.1-201ENST00000498872 EPHX2P34913 555 aa21.79■■□□□ 1.08
AP004609.1-201ENST00000498872 EIF6P56537 245 aaKnown RBP21.79■■□□□ 1.08
AP004609.1-201ENST00000498872 GRIPAP1Q4V328 841 aa21.79■■□□□ 1.08
AP004609.1-201ENST00000498872 LTBP1Q14766 1721 aa21.78■■□□□ 1.08
AP004609.1-201ENST00000498872 COL4A1P02462 1669 aa21.78■■□□□ 1.08
AP004609.1-201ENST00000498872 E9PSI1 815 aa21.78■■□□□ 1.08
AP004609.1-201ENST00000498872 LDHDQ86WU2 507 aa21.78■■□□□ 1.08
AP004609.1-201ENST00000498872 TSPYL6Q8N831 410 aa21.78■■□□□ 1.08
AP004609.1-201ENST00000498872 CLEC11AQ9Y240 323 aa21.78■■□□□ 1.08
AP004609.1-201ENST00000498872 BBOX1O75936 387 aa21.77■■□□□ 1.08
AP004609.1-201ENST00000498872 ADAMTSL1Q8N6G6 1762 aa21.77■■□□□ 1.07
AP004609.1-201ENST00000498872 GRAPQ13588 217 aa21.77■■□□□ 1.07
AP004609.1-201ENST00000498872 DPP8Q6V1X1 898 aaPredicted RBP21.77■■□□□ 1.07
AP004609.1-201ENST00000498872 SP8Q8IXZ3 490 aa21.77■■□□□ 1.07
AP004609.1-201ENST00000498872 NIM1KQ8IY84 436 aa21.77■■□□□ 1.07
AP004609.1-201ENST00000498872 GRAPLQ8TC17 118 aaPredicted RBP21.77■■□□□ 1.07
AP004609.1-201ENST00000498872 WWC1Q8IX03 1113 aa21.76■■□□□ 1.07
AP004609.1-201ENST00000498872 MPNDQ8N594 471 aa21.76■■□□□ 1.07
AP004609.1-201ENST00000498872 JMYQ8N9B5 988 aa21.76■■□□□ 1.07
AP004609.1-201ENST00000498872 MYD88Q99836 296 aa21.76■■□□□ 1.07
AP004609.1-201ENST00000498872 CCDC27Q2M243 656 aa21.75■■□□□ 1.07
AP004609.1-201ENST00000498872 LRRC37AA6NMS7 1700 aa21.75■■□□□ 1.07
AP004609.1-201ENST00000498872 IRS4O14654 1257 aaPredicted RBP21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 CCDC30Q5VVM6 783 aa21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 B4GALNT3Q6L9W6 998 aa21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 JARID2Q92833 1246 aaPredicted RBP21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 CELF1Q92879 486 aaKnown RBP21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 SPINK5Q9NQ38 1064 aaPredicted RBP21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 DUOX1Q9NRD9 1551 aa21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 EPS15P42566 896 aa21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 SCNN1DP51172 638 aa21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 MAP1SQ66K74 1059 aaPredicted RBP21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 SUPT20HQ8NEM7 779 aa21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 RTFDC1Q9BY42 306 aaPredicted RBP21.73■■□□□ 1.07
AP004609.1-201ENST00000498872 LMOD1P29536 600 aaPredicted RBP21.72■■□□□ 1.07
AP004609.1-201ENST00000498872 TRIM28Q13263 835 aaKnown RBP21.72■■□□□ 1.07
AP004609.1-201ENST00000498872 PNMA8AQ86V59 439 aaPredicted RBP21.72■■□□□ 1.07
AP004609.1-201ENST00000498872 MKRN1Q9UHC7 482 aaKnown RBP21.72■■□□□ 1.07
AP004609.1-201ENST00000498872 PASKQ96RG2 1323 aa21.71■■□□□ 1.07
AP004609.1-201ENST00000498872 ITGBL1O95965 494 aaPredicted RBP21.71■■□□□ 1.07
AP004609.1-201ENST00000498872 SF3B3Q15393 1217 aaKnown RBP21.71■■□□□ 1.07
AP004609.1-201ENST00000498872 CREBZFQ9NS37 354 aa21.71■■□□□ 1.07
AP004609.1-201ENST00000498872 WDR63Q8IWG1 891 aa21.7■■□□□ 1.06
AP004609.1-201ENST00000498872 CXCL9Q07325 125 aa21.69■■□□□ 1.06
AP004609.1-201ENST00000498872 ZBTB38Q8NAP3 1195 aaPredicted RBP21.69■■□□□ 1.06
AP004609.1-201ENST00000498872 ZNRF3Q9ULT6 936 aa21.69■■□□□ 1.06
AP004609.1-201ENST00000498872 MAP3K2Q9Y2U5 619 aa21.69■■□□□ 1.06
AP004609.1-201ENST00000498872 KIAA2012Q0VF49 1180 aa21.69■■□□□ 1.06
AP004609.1-201ENST00000498872 TWISTNBQ3B726 338 aaPredicted RBP21.69■■□□□ 1.06
AP004609.1-201ENST00000498872 IFFO2Q5TF58 517 aa21.69■■□□□ 1.06
AP004609.1-201ENST00000498872 CNTROBQ8N137 903 aa21.69■■□□□ 1.06
AP004609.1-201ENST00000498872 VPS33BQ9H267 617 aa21.69■■□□□ 1.06
AP004609.1-201ENST00000498872 TSHZ2Q9NRE2 1034 aa21.69■■□□□ 1.06
AP004609.1-201ENST00000498872 NSFL1CQ9UNZ2 370 aaKnown RBP21.69■■□□□ 1.06
AP004609.1-201ENST00000498872 DDX58O95786 925 aaKnown RBP21.68■■□□□ 1.06
AP004609.1-201ENST00000498872 CCDC85AQ96PX6 553 aaPredicted RBP21.68■■□□□ 1.06
AP004609.1-201ENST00000498872 METTL22Q9BUU2 404 aaPredicted RBP21.68■■□□□ 1.06
AP004609.1-201ENST00000498872 SEC31BQ9NQW1 1179 aa21.68■■□□□ 1.06
AP004609.1-201ENST00000498872 PI4KAP2A4QPH2 592 aa21.67■■□□□ 1.06
AP004609.1-201ENST00000498872 RAD17O75943 681 aa21.67■■□□□ 1.06
AP004609.1-201ENST00000498872 TMC4Q7Z404 712 aa21.67■■□□□ 1.06
AP004609.1-201ENST00000498872 PI4KAP1Q8N8J0 262 aa21.67■■□□□ 1.06
AP004609.1-201ENST00000498872 CCDC191Q8NCU4 936 aa21.67■■□□□ 1.06
AP004609.1-201ENST00000498872 STK31Q9BXU1 1019 aa21.67■■□□□ 1.06
AP004609.1-201ENST00000498872 CWC25Q9NXE8 425 aaPredicted RBP21.67■■□□□ 1.06
AP004609.1-201ENST00000498872 RIMBP2O15034 1052 aa21.66■■□□□ 1.06
AP004609.1-201ENST00000498872 GPSM2P81274 684 aa21.66■■□□□ 1.06
AP004609.1-201ENST00000498872 G2E3Q7L622 706 aa21.66■■□□□ 1.06
AP004609.1-201ENST00000498872 PCCAP05165 728 aaPredicted RBP21.66■■□□□ 1.06
AP004609.1-201ENST00000498872 EXOC6Q8TAG9 804 aa21.66■■□□□ 1.06
AP004609.1-201ENST00000498872 CCDC136Q96JN2 1154 aa21.66■■□□□ 1.06
AP004609.1-201ENST00000498872 GPR101Q96P66 508 aaPredicted RBP21.66■■□□□ 1.06
AP004609.1-201ENST00000498872 GPRC5DQ9NZD1 345 aa21.66■■□□□ 1.06
AP004609.1-201ENST00000498872 TMEM88BA6NKF7 163 aa21.65■■□□□ 1.06
AP004609.1-201ENST00000498872 YDJCA8MPS7 323 aa21.65■■□□□ 1.06
AP004609.1-201ENST00000498872 C6orf229H3BNL8 230 aa21.65■■□□□ 1.06
AP004609.1-201ENST00000498872 GMPSP49915 693 aaPredicted RBP21.65■■□□□ 1.06
AP004609.1-201ENST00000498872 RPS8P62241 208 aaKnown RBP21.65■■□□□ 1.06
AP004609.1-201ENST00000498872 FMR1Q06787 632 aaKnown RBP eCLIP21.65■■□□□ 1.06
AP004609.1-201ENST00000498872 CIAPIN1Q6FI81 312 aa21.65■■□□□ 1.06
AP004609.1-201ENST00000498872 KSR2Q6VAB6 950 aa21.65■■□□□ 1.06
AP004609.1-201ENST00000498872 CHMP4AQ9BY43 222 aa21.65■■□□□ 1.06
AP004609.1-201ENST00000498872 PLIN1O60240 522 aa21.64■■□□□ 1.05
AP004609.1-201ENST00000498872 SLC4A2P04920 1241 aa21.64■■□□□ 1.05
AP004609.1-201ENST00000498872 WASHC4Q2M389 1173 aa21.64■■□□□ 1.05
AP004609.1-201ENST00000498872 POLLQ9UGP5 575 aa21.64■■□□□ 1.05
AP004609.1-201ENST00000498872 FANCIQ9NVI1 1328 aa21.64■■□□□ 1.05
AP004609.1-201ENST00000498872 SPEF2Q9C093 1822 aa21.64■■□□□ 1.05
AP004609.1-201ENST00000498872 PDE8AO60658 829 aa21.63■■□□□ 1.05
AP004609.1-201ENST00000498872 IGKV5-2P06315 115 aa21.63■■□□□ 1.05
AP004609.1-201ENST00000498872 HSPA1AP0DMV8 641 aaKnown RBP21.63■■□□□ 1.05
AP004609.1-201ENST00000498872 HSPA1BP0DMV9 641 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms