RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 PPEF1O14829 653 aaPredicted RBP20.37■□□□□ 0.85
LMNA-217ENST00000498722 PDE8AO60658 829 aa20.37■□□□□ 0.85
LMNA-217ENST00000498722 BEND3Q5T5X7 828 aa20.37■□□□□ 0.85
LMNA-217ENST00000498722 SRCIN1Q9C0H9 1055 aa20.37■□□□□ 0.85
LMNA-217ENST00000498722 TMX4Q9H1E5 349 aaPredicted RBP20.37■□□□□ 0.85
LMNA-217ENST00000498722 CDHR2Q9BYE9 1310 aa20.37■□□□□ 0.85
LMNA-217ENST00000498722 CCDC93Q567U6 631 aa20.36■□□□□ 0.85
LMNA-217ENST00000498722 OLFM4Q6UX06 510 aa20.36■□□□□ 0.85
LMNA-217ENST00000498722 CCDC85AQ96PX6 553 aaPredicted RBP20.36■□□□□ 0.85
LMNA-217ENST00000498722 NOB1Q9ULX3 412 aaKnown RBP20.36■□□□□ 0.85
LMNA-217ENST00000498722 KIF16BQ96L93 1317 aa20.35■□□□□ 0.85
LMNA-217ENST00000498722 SF3B3Q15393 1217 aaKnown RBP20.35■□□□□ 0.85
LMNA-217ENST00000498722 C9orf78Q9NZ63 289 aaPredicted RBP20.35■□□□□ 0.85
LMNA-217ENST00000498722 RNF181Q9P0P0 153 aa20.35■□□□□ 0.85
LMNA-217ENST00000498722 H7C1W4 665 aa20.34■□□□□ 0.85
LMNA-217ENST00000498722 ALDH1L1O75891 902 aa20.34■□□□□ 0.85
LMNA-217ENST00000498722 PDE3AQ14432 1141 aa20.34■□□□□ 0.85
LMNA-217ENST00000498722 CCDC152Q4G0S7 254 aa20.34■□□□□ 0.85
LMNA-217ENST00000498722 C9orf131Q5VYM1 1079 aa20.34■□□□□ 0.85
LMNA-217ENST00000498722 EXOC6Q8TAG9 804 aa20.34■□□□□ 0.85
LMNA-217ENST00000498722 TAOK3Q9H2K8 898 aa20.34■□□□□ 0.85
LMNA-217ENST00000498722 NFKBIEO00221 500 aa20.33■□□□□ 0.85
LMNA-217ENST00000498722 GRAPQ13588 217 aa20.33■□□□□ 0.85
LMNA-217ENST00000498722 GRAPLQ8TC17 118 aaPredicted RBP20.33■□□□□ 0.85
LMNA-217ENST00000498722 C7orf43Q8WVR3 580 aa20.33■□□□□ 0.85
LMNA-217ENST00000498722 FRAT1Q92837 279 aaPredicted RBP20.33■□□□□ 0.85
LMNA-217ENST00000498722 GRM8O00222 908 aa20.32■□□□□ 0.84
LMNA-217ENST00000498722 MS4A1P11836 297 aa20.32■□□□□ 0.84
LMNA-217ENST00000498722 CTSWP56202 376 aa20.32■□□□□ 0.84
LMNA-217ENST00000498722 RTKN2Q8IZC4 609 aa20.32■□□□□ 0.84
LMNA-217ENST00000498722 CRBNQ96SW2 442 aa20.32■□□□□ 0.84
LMNA-217ENST00000498722 API5Q9BZZ5 524 aaKnown RBP20.32■□□□□ 0.84
LMNA-217ENST00000498722 LRRC37AA6NMS7 1700 aa20.32■□□□□ 0.84
LMNA-217ENST00000498722 BBOX1O75936 387 aa20.31■□□□□ 0.84
LMNA-217ENST00000498722 LMNB1P20700 586 aa20.31■□□□□ 0.84
LMNA-217ENST00000498722 CCDC136Q96JN2 1154 aa20.31■□□□□ 0.84
LMNA-217ENST00000498722 COL4A1P02462 1669 aa20.31■□□□□ 0.84
LMNA-217ENST00000498722 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
LMNA-217ENST00000498722 CC2D2BQ6DHV5 1058 aa20.3■□□□□ 0.84
LMNA-217ENST00000498722 CELF1Q92879 486 aaKnown RBP20.3■□□□□ 0.84
LMNA-217ENST00000498722 SEC31BQ9NQW1 1179 aa20.3■□□□□ 0.84
LMNA-217ENST00000498722 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
LMNA-217ENST00000498722 IPO8O15397 1037 aaKnown RBP20.29■□□□□ 0.84
LMNA-217ENST00000498722 SLC51AQ86UW1 340 aa20.29■□□□□ 0.84
LMNA-217ENST00000498722 ZNF526Q8TF50 670 aaPredicted RBP20.29■□□□□ 0.84
LMNA-217ENST00000498722 CHMP3Q9Y3E7 222 aa20.29■□□□□ 0.84
LMNA-217ENST00000498722 LTBP3Q9NS15 1303 aa20.29■□□□□ 0.84
LMNA-217ENST00000498722 CASP7P55210 303 aa20.28■□□□□ 0.84
LMNA-217ENST00000498722 FKBP4Q02790 459 aaKnown RBP eCLIP20.28■□□□□ 0.84
LMNA-217ENST00000498722 C20orf194Q5TEA3 1177 aa20.28■□□□□ 0.84
LMNA-217ENST00000498722 B4GALNT3Q6L9W6 998 aa20.28■□□□□ 0.84
LMNA-217ENST00000498722 TTLL11Q8NHH1 800 aa20.28■□□□□ 0.84
LMNA-217ENST00000498722 RPS8P62241 208 aaKnown RBP20.27■□□□□ 0.84
LMNA-217ENST00000498722 ZKSCAN2Q63HK3 967 aa20.27■□□□□ 0.84
LMNA-217ENST00000498722 TMC4Q7Z404 712 aa20.27■□□□□ 0.84
LMNA-217ENST00000498722 GREM2Q9H772 168 aa20.27■□□□□ 0.84
LMNA-217ENST00000498722 ZNF277Q9NRM2 450 aaPredicted RBP20.27■□□□□ 0.84
LMNA-217ENST00000498722 CCT4P50991 539 aaKnown RBP20.27■□□□□ 0.83
LMNA-217ENST00000498722 PRELPP51888 382 aa20.27■□□□□ 0.83
LMNA-217ENST00000498722 GRIPAP1Q4V328 841 aa20.27■□□□□ 0.83
LMNA-217ENST00000498722 ANKRD18AQ8IVF6 992 aa20.27■□□□□ 0.83
LMNA-217ENST00000498722 SP8Q8IXZ3 490 aa20.27■□□□□ 0.83
LMNA-217ENST00000498722 ZNF784Q8NCA9 323 aaPredicted RBP20.27■□□□□ 0.83
LMNA-217ENST00000498722 CDC5LQ99459 802 aaKnown RBP20.27■□□□□ 0.83
LMNA-217ENST00000498722 PLA2G12BQ9BX93 195 aa20.27■□□□□ 0.83
LMNA-217ENST00000498722 NBPF7P0C2Y1 421 aaPredicted RBP20.26■□□□□ 0.83
LMNA-217ENST00000498722 AAMPQ13685 434 aa20.26■□□□□ 0.83
LMNA-217ENST00000498722 FAM161AQ3B820 660 aa20.26■□□□□ 0.83
LMNA-217ENST00000498722 DPP8Q6V1X1 898 aaPredicted RBP20.26■□□□□ 0.83
LMNA-217ENST00000498722 ARHGAP45Q92619 1136 aa20.26■□□□□ 0.83
LMNA-217ENST00000498722 MPNDQ8N594 471 aa20.25■□□□□ 0.83
LMNA-217ENST00000498722 CLUAP1Q96AJ1 413 aa20.25■□□□□ 0.83
LMNA-217ENST00000498722 PSMD1Q99460 953 aa20.25■□□□□ 0.83
LMNA-217ENST00000498722 TRIM27P14373 513 aa20.24■□□□□ 0.83
LMNA-217ENST00000498722 ITGA6P23229 1130 aa20.24■□□□□ 0.83
LMNA-217ENST00000498722 FOXO4P98177 505 aa20.24■□□□□ 0.83
LMNA-217ENST00000498722 ATF7IPQ6VMQ6 1270 aa20.24■□□□□ 0.83
LMNA-217ENST00000498722 SNED1Q8TER0 1413 aa20.23■□□□□ 0.83
LMNA-217ENST00000498722 RTL9Q8NET4 1388 aa20.23■□□□□ 0.83
LMNA-217ENST00000498722 IGHMBP2P38935 993 aaKnown RBP20.23■□□□□ 0.83
LMNA-217ENST00000498722 IARSP41252 1262 aaKnown RBP20.23■□□□□ 0.83
LMNA-217ENST00000498722 LMBR1LQ6UX01 489 aa20.23■□□□□ 0.83
LMNA-217ENST00000498722 SUCLG2Q96I99 432 aa20.23■□□□□ 0.83
LMNA-217ENST00000498722 NSFL1CQ9UNZ2 370 aaKnown RBP20.23■□□□□ 0.83
LMNA-217ENST00000498722 LTBP1Q14766 1721 aa20.22■□□□□ 0.83
LMNA-217ENST00000498722 A0A1B0GUL6 1792 aa20.22■□□□□ 0.83
LMNA-217ENST00000498722 ANKRD18BA2A2Z9 1011 aa20.22■□□□□ 0.83
LMNA-217ENST00000498722 IFIT5Q13325 482 aaKnown RBP20.22■□□□□ 0.83
LMNA-217ENST00000498722 EPHA10Q5JZY3 1008 aa20.22■□□□□ 0.83
LMNA-217ENST00000498722 SUPT20HQ8NEM7 779 aa20.22■□□□□ 0.83
LMNA-217ENST00000498722 USP44Q9H0E7 712 aa20.22■□□□□ 0.83
LMNA-217ENST00000498722 GPBP1L1Q9HC44 474 aaPredicted RBP20.22■□□□□ 0.83
LMNA-217ENST00000498722 ANKIB1Q9P2G1 1089 aa20.22■□□□□ 0.83
LMNA-217ENST00000498722 TNNQ9UQP3 1299 aa20.22■□□□□ 0.83
LMNA-217ENST00000498722 UTYO14607 1347 aa20.21■□□□□ 0.83
LMNA-217ENST00000498722 CSF1RP07333 972 aa20.21■□□□□ 0.83
LMNA-217ENST00000498722 TAF7LQ5H9L4 462 aa20.21■□□□□ 0.83
LMNA-217ENST00000498722 FTSJ3Q8IY81 847 aaKnown RBP20.21■□□□□ 0.83
LMNA-217ENST00000498722 DZIP1LQ8IYY4 767 aaKnown RBP20.21■□□□□ 0.83
LMNA-217ENST00000498722 LARGE2Q8N3Y3 721 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms