RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PNPLA6Q8IY17 1366 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 ANKRD36BQ8N2N9 1353 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 COL16A1Q07092 1604 aaPredicted RBP4.95□□□□□ -1.62
CLTC-209ENST00000498711 PPIP5K1Q6PFW1 1433 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 NSD3Q9BZ95 1437 aa4.95□□□□□ -1.62
CLTC-209ENST00000498711 TK2O00142 265 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 C21orf2O43822 256 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 HMGB1P09429 215 aaKnown RBP4.94□□□□□ -1.62
CLTC-209ENST00000498711 CCDC102BQ68D86 513 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 SH3BP5LQ7L8J4 393 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 CCDC146Q8IYE0 955 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 CCDC85AQ96PX6 553 aaPredicted RBP4.94□□□□□ -1.62
CLTC-209ENST00000498711 ZBTB7BO15156 539 aaPredicted RBP4.94□□□□□ -1.62
CLTC-209ENST00000498711 RLBP1P12271 317 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 MMP16P51512 607 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 HSPA2P54652 639 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 BECN1Q14457 450 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 PRIMPOLQ96LW4 560 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 PDZRN3Q9UPQ7 1066 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 ROBO1Q9Y6N7 1651 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 ABCC11Q96J66 1382 aa4.94□□□□□ -1.62
CLTC-209ENST00000498711 KCNA6P17658 529 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 FBXO33Q7Z6M2 555 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 CDAN1Q8IWY9 1227 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 C8orf37Q96NL8 207 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 ASB16Q96NS5 453 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 DCTN4Q9UJW0 460 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 TBX22Q9Y458 520 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 NALCNQ8IZF0 1738 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.93□□□□□ -1.62
CLTC-209ENST00000498711 MVPQ14764 893 aaKnown RBP4.93□□□□□ -1.62
CLTC-209ENST00000498711 SMC5Q8IY18 1101 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 TCP11L2Q8N4U5 519 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 ANKK1Q8NFD2 765 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 TPCN2Q8NHX9 752 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 PANK1Q8TE04 598 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 SNX21Q969T3 373 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 RWDD1Q9H446 243 aaPredicted RBP4.93□□□□□ -1.62
CLTC-209ENST00000498711 ANO2Q9NQ90 1003 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 HPS5Q9UPZ3 1129 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.93□□□□□ -1.62
CLTC-209ENST00000498711 CD163L1Q9NR16 1453 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 PHLPP1O60346 1717 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 SFI1A8K8P3 1242 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 PSME1Q06323 249 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 L1TD1Q5T7N2 865 aaKnown RBP4.93□□□□□ -1.62
CLTC-209ENST00000498711 RNF20Q5VTR2 975 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 ZSCAN29Q8IWY8 852 aaPredicted RBP4.93□□□□□ -1.62
CLTC-209ENST00000498711 SPSB2Q99619 263 aa4.93□□□□□ -1.62
CLTC-209ENST00000498711 SOWAHBA6NEL2 793 aa4.92□□□□□ -1.62
CLTC-209ENST00000498711 TOM1O60784 492 aa4.92□□□□□ -1.62
CLTC-209ENST00000498711 RGS3P49796 1198 aa4.92□□□□□ -1.62
CLTC-209ENST00000498711 CLEC17AQ6ZS10 378 aa4.92□□□□□ -1.62
CLTC-209ENST00000498711 FAM160A2Q8N612 972 aaPredicted RBP4.92□□□□□ -1.62
CLTC-209ENST00000498711 GTF3C2Q8WUA4 911 aaPredicted RBP4.92□□□□□ -1.62
CLTC-209ENST00000498711 UNC93B1Q9H1C4 597 aa4.92□□□□□ -1.62
CLTC-209ENST00000498711 TSR3Q9UJK0 312 aaKnown RBP4.92□□□□□ -1.62
CLTC-209ENST00000498711 ISY1Q9ULR0 285 aaKnown RBP4.92□□□□□ -1.62
CLTC-209ENST00000498711 CDK12Q9NYV4 1490 aaPredicted RBP4.92□□□□□ -1.62
CLTC-209ENST00000498711 FMN2Q9NZ56 1722 aa4.92□□□□□ -1.62
CLTC-209ENST00000498711 ADGRL3Q9HAR2 1447 aa4.92□□□□□ -1.62
CLTC-209ENST00000498711 HSP90B1P14625 803 aaKnown RBP4.92□□□□□ -1.62
CLTC-209ENST00000498711 SF3B2Q13435 895 aaKnown RBP4.92□□□□□ -1.62
CLTC-209ENST00000498711 ZNF687Q8N1G0 1237 aa4.92□□□□□ -1.62
CLTC-209ENST00000498711 HINFPQ9BQA5 517 aa4.92□□□□□ -1.62
CLTC-209ENST00000498711 MYH16Q9H6N6 1097 aa4.92□□□□□ -1.62
CLTC-209ENST00000498711 PRDM9Q9NQV7 894 aa4.92□□□□□ -1.62
CLTC-209ENST00000498711 PTCD1O75127 700 aaKnown RBP4.91□□□□□ -1.62
CLTC-209ENST00000498711 GIGYF1O75420 1035 aaPredicted RBP4.91□□□□□ -1.62
CLTC-209ENST00000498711 COL19A1Q14993 1142 aa4.91□□□□□ -1.62
CLTC-209ENST00000498711 SH3RF1Q7Z6J0 888 aa4.91□□□□□ -1.62
CLTC-209ENST00000498711 MORC1Q86VD1 984 aa4.91□□□□□ -1.62
CLTC-209ENST00000498711 PCDHGA11Q9Y5H2 935 aa4.91□□□□□ -1.62
CLTC-209ENST00000498711 ITSN1Q15811 1721 aa4.91□□□□□ -1.62
CLTC-209ENST00000498711 MARF1Q9Y4F3 1742 aaKnown RBP4.91□□□□□ -1.62
CLTC-209ENST00000498711 MAGEB6P1A0A0J9YX57 407 aa4.91□□□□□ -1.62
CLTC-209ENST00000498711 MCM4P33991 863 aa4.91□□□□□ -1.62
CLTC-209ENST00000498711 POGKQ9P215 609 aa4.91□□□□□ -1.62
CLTC-209ENST00000498711 TNNQ9UQP3 1299 aa4.91□□□□□ -1.62
CLTC-209ENST00000498711 DNMT3AQ9Y6K1 912 aaPredicted RBP4.91□□□□□ -1.62
CLTC-209ENST00000498711 RECKO95980 971 aa4.9□□□□□ -1.62
CLTC-209ENST00000498711 ZC3H6P61129 1189 aaKnown RBP4.9□□□□□ -1.62
CLTC-209ENST00000498711 ARHGAP4P98171 946 aa4.9□□□□□ -1.62
CLTC-209ENST00000498711 FKBP4Q02790 459 aaKnown RBP eCLIP4.9□□□□□ -1.62
CLTC-209ENST00000498711 USP4Q13107 963 aa4.9□□□□□ -1.62
CLTC-209ENST00000498711 ALDH1L2Q3SY69 923 aa4.9□□□□□ -1.62
CLTC-209ENST00000498711 ZKSCAN2Q63HK3 967 aa4.9□□□□□ -1.62
CLTC-209ENST00000498711 SREK1Q8WXA9 508 aaKnown RBP4.9□□□□□ -1.62
CLTC-209ENST00000498711 DRC1Q96MC2 740 aa4.9□□□□□ -1.62
CLTC-209ENST00000498711 MKNK1Q9BUB5 465 aa4.9□□□□□ -1.62
CLTC-209ENST00000498711 ZBTB40Q9NUA8 1239 aa4.9□□□□□ -1.62
CLTC-209ENST00000498711 ZNF335Q9H4Z2 1342 aaPredicted RBP4.9□□□□□ -1.62
CLTC-209ENST00000498711 KIF24Q5T7B8 1368 aa4.9□□□□□ -1.62
CLTC-209ENST00000498711 GOLGA8CPA6NN73 597 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 WEE1P30291 646 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 MTHFSP49914 203 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 BCAMP50895 628 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 ECM1Q16610 540 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 ADGRD1Q6QNK2 874 aa4.9□□□□□ -1.63
CLTC-209ENST00000498711 DZIP1LQ8IYY4 767 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms