RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 GPC6Q9Y625 555 aaPredicted RBP11.91□□□□□ -0.5
SNX13-212ENST00000498463 KIAA0825Q8IV33 1275 aa11.9□□□□□ -0.5
SNX13-212ENST00000498463 AIDAQ96BJ3 306 aa11.9□□□□□ -0.5
SNX13-212ENST00000498463 SEC16BQ96JE7 1060 aa11.9□□□□□ -0.5
SNX13-212ENST00000498463 NOC4LQ9BVI4 516 aaKnown RBP11.9□□□□□ -0.5
SNX13-212ENST00000498463 GRIP2Q9C0E4 1043 aa11.9□□□□□ -0.5
SNX13-212ENST00000498463 CWC22Q9HCG8 908 aaKnown RBP11.9□□□□□ -0.5
SNX13-212ENST00000498463 KCNMB2Q9Y691 235 aa11.9□□□□□ -0.5
SNX13-212ENST00000498463 ZIC2O95409 532 aaPredicted RBP11.89□□□□□ -0.51
SNX13-212ENST00000498463 GRM2Q14416 872 aa11.89□□□□□ -0.51
SNX13-212ENST00000498463 SLC27A3Q5K4L6 730 aa11.89□□□□□ -0.51
SNX13-212ENST00000498463 GALNT12Q8IXK2 581 aa11.89□□□□□ -0.51
SNX13-212ENST00000498463 CMTR1Q8N1G2 835 aaKnown RBP11.89□□□□□ -0.51
SNX13-212ENST00000498463 KLF16Q9BXK1 252 aaPredicted RBP11.89□□□□□ -0.51
SNX13-212ENST00000498463 CHRDQ9H2X0 955 aa11.89□□□□□ -0.51
SNX13-212ENST00000498463 ZFAND3Q9H8U3 227 aa11.89□□□□□ -0.51
SNX13-212ENST00000498463 WASF2Q9Y6W5 498 aa11.89□□□□□ -0.51
SNX13-212ENST00000498463 SSBP05455 408 aaKnown RBP eCLIP11.88□□□□□ -0.51
SNX13-212ENST00000498463 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
SNX13-212ENST00000498463 GSTT1P30711 240 aa11.88□□□□□ -0.51
SNX13-212ENST00000498463 GPC1P35052 558 aa11.88□□□□□ -0.51
SNX13-212ENST00000498463 SUV39H2Q9H5I1 410 aa11.88□□□□□ -0.51
SNX13-212ENST00000498463 ZNF408Q9H9D4 720 aa11.88□□□□□ -0.51
SNX13-212ENST00000498463 ADAMTS1Q9UHI8 967 aa11.88□□□□□ -0.51
SNX13-212ENST00000498463 TTF2Q9UNY4 1162 aaKnown RBP11.88□□□□□ -0.51
SNX13-212ENST00000498463 XRCC5P13010 732 aaKnown RBP11.87□□□□□ -0.51
SNX13-212ENST00000498463 HSD3B2P26439 372 aa11.87□□□□□ -0.51
SNX13-212ENST00000498463 BTLAQ7Z6A9 289 aa11.87□□□□□ -0.51
SNX13-212ENST00000498463 ANKIB1Q9P2G1 1089 aa11.87□□□□□ -0.51
SNX13-212ENST00000498463 EREGO14944 169 aa11.86□□□□□ -0.51
SNX13-212ENST00000498463 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
SNX13-212ENST00000498463 NFX1Q12986 1120 aaKnown RBP11.86□□□□□ -0.51
SNX13-212ENST00000498463 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
SNX13-212ENST00000498463 PHKA2P46019 1235 aa11.84□□□□□ -0.51
SNX13-212ENST00000498463 WDR4P57081 412 aaKnown RBP11.84□□□□□ -0.51
SNX13-212ENST00000498463 PWP1Q13610 501 aa11.84□□□□□ -0.51
SNX13-212ENST00000498463 PTPROQ16827 1216 aa11.84□□□□□ -0.51
SNX13-212ENST00000498463 BICDL1Q6ZP65 573 aa11.84□□□□□ -0.51
SNX13-212ENST00000498463 C1orf127Q8N9H9 656 aa11.84□□□□□ -0.51
SNX13-212ENST00000498463 C3orf58Q8NDZ4 430 aa11.84□□□□□ -0.51
SNX13-212ENST00000498463 MKL1Q969V6 931 aa11.84□□□□□ -0.51
SNX13-212ENST00000498463 F6X3S4 739 aa11.83□□□□□ -0.52
SNX13-212ENST00000498463 ATP4AP20648 1035 aa11.83□□□□□ -0.52
SNX13-212ENST00000498463 RNF144AP50876 292 aaPredicted RBP11.83□□□□□ -0.52
SNX13-212ENST00000498463 CNTN3Q9P232 1028 aa11.83□□□□□ -0.52
SNX13-212ENST00000498463 EFR3BQ9Y2G0 817 aa11.83□□□□□ -0.52
SNX13-212ENST00000498463 GRNP28799 593 aaKnown RBP11.82□□□□□ -0.52
SNX13-212ENST00000498463 CCDC85BQ15834 202 aaPredicted RBP11.82□□□□□ -0.52
SNX13-212ENST00000498463 GLIS3Q8NEA6 775 aa11.82□□□□□ -0.52
SNX13-212ENST00000498463 KCNB2Q92953 911 aa11.82□□□□□ -0.52
SNX13-212ENST00000498463 TRIM56Q9BRZ2 755 aaKnown RBP11.82□□□□□ -0.52
SNX13-212ENST00000498463 hCG_2014768A0A024R1R8 64 aa11.81□□□□□ -0.52
SNX13-212ENST00000498463 RAB11FIP3O75154 756 aa11.81□□□□□ -0.52
SNX13-212ENST00000498463 XYLBO75191 536 aa11.81□□□□□ -0.52
SNX13-212ENST00000498463 CLSTN1O94985 981 aa11.81□□□□□ -0.52
SNX13-212ENST00000498463 TIMP2P16035 220 aa11.81□□□□□ -0.52
SNX13-212ENST00000498463 EIF4A3P38919 411 aaKnown RBP11.81□□□□□ -0.52
SNX13-212ENST00000498463 VEGFBP49765 207 aa11.81□□□□□ -0.52
SNX13-212ENST00000498463 MAP3K10Q02779 954 aa11.81□□□□□ -0.52
SNX13-212ENST00000498463 RELL1Q8IUW5 271 aa11.81□□□□□ -0.52
SNX13-212ENST00000498463 TMEM74Q96NL1 305 aa11.81□□□□□ -0.52
SNX13-212ENST00000498463 GINM1Q9NU53 330 aa11.81□□□□□ -0.52
SNX13-212ENST00000498463 ABI2Q9NYB9 513 aaPredicted RBP11.81□□□□□ -0.52
SNX13-212ENST00000498463 MINDY4BA8MYZ0 360 aa11.8□□□□□ -0.52
SNX13-212ENST00000498463 SPATA31C2B4DYI2 1134 aa11.8□□□□□ -0.52
SNX13-212ENST00000498463 EPB42P16452 691 aa11.8□□□□□ -0.52
SNX13-212ENST00000498463 GBP2P32456 591 aaPredicted RBP11.8□□□□□ -0.52
SNX13-212ENST00000498463 ETFBP38117 255 aa11.8□□□□□ -0.52
SNX13-212ENST00000498463 LRRC69Q6ZNQ3 347 aa11.8□□□□□ -0.52
SNX13-212ENST00000498463 ANKS3Q6ZW76 656 aa11.8□□□□□ -0.52
SNX13-212ENST00000498463 MEIOBQ8N635 442 aa11.8□□□□□ -0.52
SNX13-212ENST00000498463 EAF1Q96JC9 268 aaPredicted RBP11.8□□□□□ -0.52
SNX13-212ENST00000498463 INSM2Q96T92 566 aaPredicted RBP11.8□□□□□ -0.52
SNX13-212ENST00000498463 SIRPGQ9P1W8 387 aa11.8□□□□□ -0.52
SNX13-212ENST00000498463 STRIP2Q9ULQ0 834 aa11.8□□□□□ -0.52
SNX13-212ENST00000498463 TRAK1Q9UPV9 953 aa11.8□□□□□ -0.52
SNX13-212ENST00000498463 MRVI1Q9Y6F6 885 aa11.8□□□□□ -0.52
SNX13-212ENST00000498463 ENPP3O14638 875 aa11.79□□□□□ -0.52
SNX13-212ENST00000498463 SLC19A1P41440 591 aa11.79□□□□□ -0.52
SNX13-212ENST00000498463 SOX9P48436 509 aa11.79□□□□□ -0.52
SNX13-212ENST00000498463 TYRO3Q06418 890 aa11.79□□□□□ -0.52
SNX13-212ENST00000498463 KIAA0319Q5VV43 1072 aa11.79□□□□□ -0.52
SNX13-212ENST00000498463 MICAL1Q8TDZ2 1067 aa11.79□□□□□ -0.52
SNX13-212ENST00000498463 SRPK1Q96SB4 655 aaKnown RBP11.79□□□□□ -0.52
SNX13-212ENST00000498463 TRIM55Q9BYV6 548 aa11.79□□□□□ -0.52
SNX13-212ENST00000498463 EHD4Q9H223 541 aa11.79□□□□□ -0.52
SNX13-212ENST00000498463 CES1P23141 567 aa11.78□□□□□ -0.52
SNX13-212ENST00000498463 IGBP1P78318 339 aa11.78□□□□□ -0.52
SNX13-212ENST00000498463 ZNF296Q8WUU4 475 aaPredicted RBP11.78□□□□□ -0.52
SNX13-212ENST00000498463 ZIC5Q96T25 663 aa11.78□□□□□ -0.52
SNX13-212ENST00000498463 LATS2Q9NRM7 1088 aa11.78□□□□□ -0.52
SNX13-212ENST00000498463 PPP4R2Q9NY27 417 aa11.78□□□□□ -0.52
SNX13-212ENST00000498463 PPM1HQ9ULR3 514 aa11.78□□□□□ -0.52
SNX13-212ENST00000498463 KLF4O43474 513 aa11.77□□□□□ -0.53
SNX13-212ENST00000498463 RNF187Q5TA31 235 aaPredicted RBP11.77□□□□□ -0.53
SNX13-212ENST00000498463 NLRP13Q86W25 1043 aa11.77□□□□□ -0.53
SNX13-212ENST00000498463 PMEPA1Q969W9 287 aa11.77□□□□□ -0.53
SNX13-212ENST00000498463 RNPC3Q96LT9 517 aaKnown RBP11.77□□□□□ -0.53
SNX13-212ENST00000498463 A0A1W2PP55 124 aa11.76□□□□□ -0.53
SNX13-212ENST00000498463 MARCH6O60337 910 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms