RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 WHAMMQ8TF30 809 aa8.78□□□□□ -1
SSR3-209ENST00000498205 TUT1Q9H6E5 874 aaKnown RBP8.78□□□□□ -1
SSR3-209ENST00000498205 UBAP1LF5GYI3 381 aa8.77□□□□□ -1.01
SSR3-209ENST00000498205 RNF225M0QZC1 329 aaPredicted RBP8.77□□□□□ -1.01
SSR3-209ENST00000498205 NFKB1P19838 968 aa8.77□□□□□ -1.01
SSR3-209ENST00000498205 SOX18P35713 384 aa8.77□□□□□ -1.01
SSR3-209ENST00000498205 XKR5Q6UX68 686 aa8.77□□□□□ -1.01
SSR3-209ENST00000498205 CITED4Q96RK1 184 aa8.77□□□□□ -1.01
SSR3-209ENST00000498205 UBE2OQ9C0C9 1292 aaKnown RBP8.77□□□□□ -1.01
SSR3-209ENST00000498205 KLF15Q9UIH9 416 aa8.77□□□□□ -1.01
SSR3-209ENST00000498205 AMPD1P23109 780 aa8.76□□□□□ -1.01
SSR3-209ENST00000498205 MTMR3Q13615 1198 aa8.76□□□□□ -1.01
SSR3-209ENST00000498205 GRIN2CQ14957 1233 aa8.76□□□□□ -1.01
SSR3-209ENST00000498205 PODNQ7Z5L7 613 aa8.76□□□□□ -1.01
SSR3-209ENST00000498205 EDEM1Q92611 657 aa8.76□□□□□ -1.01
SSR3-209ENST00000498205 NUDT16Q96DE0 195 aaKnown RBP8.76□□□□□ -1.01
SSR3-209ENST00000498205 SCARF2Q96GP6 870 aaPredicted RBP8.76□□□□□ -1.01
SSR3-209ENST00000498205 MDFIQ99750 246 aa8.76□□□□□ -1.01
SSR3-209ENST00000498205 SASH3O75995 380 aa8.75□□□□□ -1.01
SSR3-209ENST00000498205 PDGFAP04085 211 aa8.75□□□□□ -1.01
SSR3-209ENST00000498205 PSAPP07602 524 aa8.75□□□□□ -1.01
SSR3-209ENST00000498205 ADH7P40394 386 aa8.75□□□□□ -1.01
SSR3-209ENST00000498205 MARSP56192 900 aaKnown RBP8.75□□□□□ -1.01
SSR3-209ENST00000498205 DNM1Q05193 864 aaKnown RBP8.75□□□□□ -1.01
SSR3-209ENST00000498205 DHX32Q7L7V1 743 aaKnown RBP8.75□□□□□ -1.01
SSR3-209ENST00000498205 RAB44Q7Z6P3 723 aaPredicted RBP8.75□□□□□ -1.01
SSR3-209ENST00000498205 ADAMTS8Q9UP79 889 aa8.75□□□□□ -1.01
SSR3-209ENST00000498205 SOWAHDA6NJG2 315 aa8.74□□□□□ -1.01
SSR3-209ENST00000498205 NDUFB5O43674 189 aa8.74□□□□□ -1.01
SSR3-209ENST00000498205 HOXD8P13378 290 aaPredicted RBP8.74□□□□□ -1.01
SSR3-209ENST00000498205 TARSP26639 723 aaKnown RBP8.74□□□□□ -1.01
SSR3-209ENST00000498205 NRLP54845 237 aa8.74□□□□□ -1.01
SSR3-209ENST00000498205 PLAURQ03405 335 aa8.74□□□□□ -1.01
SSR3-209ENST00000498205 TRIP4Q15650 581 aaPredicted RBP8.74□□□□□ -1.01
SSR3-209ENST00000498205 C1orf229Q6ZS94 237 aaPredicted RBP8.74□□□□□ -1.01
SSR3-209ENST00000498205 CHSY3Q70JA7 882 aa8.74□□□□□ -1.01
SSR3-209ENST00000498205 ATCAYQ86WG3 371 aa8.74□□□□□ -1.01
SSR3-209ENST00000498205 BTBD6Q96KE9 485 aa8.74□□□□□ -1.01
SSR3-209ENST00000498205 ANO2Q9NQ90 1003 aa8.74□□□□□ -1.01
SSR3-209ENST00000498205 TLR7Q9NYK1 1049 aaKnown RBP8.74□□□□□ -1.01
SSR3-209ENST00000498205 BRPF3Q9ULD4 1205 aa8.74□□□□□ -1.01
SSR3-209ENST00000498205 USP20Q9Y2K6 914 aa8.74□□□□□ -1.01
SSR3-209ENST00000498205 PHF20L1A8MW92 1017 aa8.73□□□□□ -1.01
SSR3-209ENST00000498205 SHISA8B8ZZ34 492 aa8.73□□□□□ -1.01
SSR3-209ENST00000498205 GPLD1P80108 840 aa8.73□□□□□ -1.01
SSR3-209ENST00000498205 PDE3BQ13370 1112 aa8.73□□□□□ -1.01
SSR3-209ENST00000498205 TTC39BQ5VTQ0 682 aaPredicted RBP8.73□□□□□ -1.01
SSR3-209ENST00000498205 KRT25Q7Z3Z0 450 aa8.73□□□□□ -1.01
SSR3-209ENST00000498205 ZNF438Q7Z4V0 828 aa8.73□□□□□ -1.01
SSR3-209ENST00000498205 BEND7Q8N7W2 519 aaPredicted RBP8.73□□□□□ -1.01
SSR3-209ENST00000498205 TRPM4Q8TD43 1214 aa8.73□□□□□ -1.01
SSR3-209ENST00000498205 PMEPA1Q969W9 287 aa8.73□□□□□ -1.01
SSR3-209ENST00000498205 ABI2Q9NYB9 513 aaPredicted RBP8.73□□□□□ -1.01
SSR3-209ENST00000498205 MKL2Q9ULH7 1088 aa8.73□□□□□ -1.01
SSR3-209ENST00000498205 NEFLP07196 543 aa8.72□□□□□ -1.01
SSR3-209ENST00000498205 HOMEZQ8IX15 550 aa8.72□□□□□ -1.01
SSR3-209ENST00000498205 RBSNQ9H1K0 784 aa8.72□□□□□ -1.01
SSR3-209ENST00000498205 DNAJB12Q9NXW2 375 aaKnown RBP8.72□□□□□ -1.01
SSR3-209ENST00000498205 ZFATQ9P243 1243 aa8.72□□□□□ -1.01
SSR3-209ENST00000498205 POLIQ9UNA4 740 aa8.72□□□□□ -1.01
SSR3-209ENST00000498205 FZD6O60353 706 aa8.71□□□□□ -1.02
SSR3-209ENST00000498205 ARHGAP4P98171 946 aa8.71□□□□□ -1.02
SSR3-209ENST00000498205 C8orf34Q49A92 452 aa8.71□□□□□ -1.02
SSR3-209ENST00000498205 OR13H1Q8NG92 308 aa8.71□□□□□ -1.02
SSR3-209ENST00000498205 RRAGCQ9HB90 399 aa8.71□□□□□ -1.02
SSR3-209ENST00000498205 PRDM6Q9NQX0 595 aa8.71□□□□□ -1.02
SSR3-209ENST00000498205 FRRS1LQ9P0K9 344 aa8.71□□□□□ -1.02
SSR3-209ENST00000498205 SLC6A14Q9UN76 642 aa8.71□□□□□ -1.02
SSR3-209ENST00000498205 IVNS1ABPQ9Y6Y0 642 aa8.71□□□□□ -1.02
SSR3-209ENST00000498205 MMP20O60882 483 aa8.7□□□□□ -1.02
SSR3-209ENST00000498205 GJD3Q8N144 294 aa8.7□□□□□ -1.02
SSR3-209ENST00000498205 IGFLR1Q9H665 355 aa8.7□□□□□ -1.02
SSR3-209ENST00000498205 ELP3Q9H9T3 547 aa8.7□□□□□ -1.02
SSR3-209ENST00000498205 DGKGP49619 791 aa8.69□□□□□ -1.02
SSR3-209ENST00000498205 TBC1D8BQ0IIM8 1120 aa8.69□□□□□ -1.02
SSR3-209ENST00000498205 ECM1Q16610 540 aa8.69□□□□□ -1.02
SSR3-209ENST00000498205 ALYREFQ86V81 257 aaKnown RBP8.69□□□□□ -1.02
SSR3-209ENST00000498205 GNB5O14775 395 aa8.68□□□□□ -1.02
SSR3-209ENST00000498205 FAM35AQ86V20 835 aa8.68□□□□□ -1.02
SSR3-209ENST00000498205 TTC9Q92623 222 aa8.68□□□□□ -1.02
SSR3-209ENST00000498205 SPACA7Q96KW9 195 aa8.68□□□□□ -1.02
SSR3-209ENST00000498205 NOP53Q9NZM5 478 aaKnown RBP8.68□□□□□ -1.02
SSR3-209ENST00000498205 BIN2Q9UBW5 565 aaPredicted RBP8.68□□□□□ -1.02
SSR3-209ENST00000498205 SPDYE3A6NKU9 549 aa8.67□□□□□ -1.02
SSR3-209ENST00000498205 GHRHP01286 108 aa8.67□□□□□ -1.02
SSR3-209ENST00000498205 HYAL2Q12891 473 aa8.67□□□□□ -1.02
SSR3-209ENST00000498205 AEBP1Q8IUX7 1158 aa8.67□□□□□ -1.02
SSR3-209ENST00000498205 CACTIN-AS1Q8N1I8 211 aa8.67□□□□□ -1.02
SSR3-209ENST00000498205 SNX29Q8TEQ0 813 aa8.67□□□□□ -1.02
SSR3-209ENST00000498205 DMRTB1Q96MA1 342 aa8.67□□□□□ -1.02
SSR3-209ENST00000498205 GGNBP2Q9H3C7 697 aa8.67□□□□□ -1.02
SSR3-209ENST00000498205 DCTN4Q9UJW0 460 aa8.67□□□□□ -1.02
SSR3-209ENST00000498205 LOC102724428A0A0B4J2F2 783 aa8.66□□□□□ -1.02
SSR3-209ENST00000498205 LILRB5O75023 590 aa8.66□□□□□ -1.02
SSR3-209ENST00000498205 SIK1P57059 783 aa8.66□□□□□ -1.02
SSR3-209ENST00000498205 MICALL1Q8N3F8 863 aa8.66□□□□□ -1.02
SSR3-209ENST00000498205 RBCK1Q9BYM8 510 aa8.66□□□□□ -1.02
SSR3-209ENST00000498205 CCDC87Q9NVE4 849 aa8.66□□□□□ -1.02
SSR3-209ENST00000498205 M0R082 166 aa8.65□□□□□ -1.02
SSR3-209ENST00000498205 RGS9O75916 674 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms