RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 NPR1P16066 1061 aa21.92■■□□□ 1.1
CTDSP1-215ENST00000498160 SYNE4Q8N205 404 aa21.92■■□□□ 1.1
CTDSP1-215ENST00000498160 EXOC6Q8TAG9 804 aa21.92■■□□□ 1.1
CTDSP1-215ENST00000498160 JARID2Q92833 1246 aaPredicted RBP21.92■■□□□ 1.1
CTDSP1-215ENST00000498160 RBM17Q96I25 401 aaKnown RBP21.92■■□□□ 1.1
CTDSP1-215ENST00000498160 CDC5LQ99459 802 aaKnown RBP21.92■■□□□ 1.1
CTDSP1-215ENST00000498160 CCDC57Q2TAC2 916 aa21.91■■□□□ 1.1
CTDSP1-215ENST00000498160 LMBR1LQ6UX01 489 aa21.91■■□□□ 1.1
CTDSP1-215ENST00000498160 DDX46Q7L014 1031 aaKnown RBP21.91■■□□□ 1.1
CTDSP1-215ENST00000498160 MASTLQ96GX5 879 aa21.91■■□□□ 1.1
CTDSP1-215ENST00000498160 KAZALD1Q96I82 304 aa21.91■■□□□ 1.1
CTDSP1-215ENST00000498160 ANKRD18BA2A2Z9 1011 aa21.9■■□□□ 1.1
CTDSP1-215ENST00000498160 ALDH1B1P30837 517 aa21.9■■□□□ 1.1
CTDSP1-215ENST00000498160 HOXA10P31260 410 aaPredicted RBP21.9■■□□□ 1.1
CTDSP1-215ENST00000498160 ATP8B2P98198 1209 aa21.9■■□□□ 1.1
CTDSP1-215ENST00000498160 IFIT5Q13325 482 aaKnown RBP21.9■■□□□ 1.1
CTDSP1-215ENST00000498160 STYK1Q6J9G0 422 aa21.9■■□□□ 1.1
CTDSP1-215ENST00000498160 TMC4Q7Z404 712 aa21.9■■□□□ 1.1
CTDSP1-215ENST00000498160 ANKRD44Q8N8A2 993 aa21.9■■□□□ 1.1
CTDSP1-215ENST00000498160 TNRC6CQ9HCJ0 1690 aaKnown RBP21.9■■□□□ 1.1
CTDSP1-215ENST00000498160 SRGNP10124 158 aa21.89■■□□□ 1.09
CTDSP1-215ENST00000498160 C2CD5Q86YS7 1000 aa21.89■■□□□ 1.09
CTDSP1-215ENST00000498160 CRAMP1Q96RY5 1269 aa21.89■■□□□ 1.09
CTDSP1-215ENST00000498160 FBXO3Q9UK99 471 aa21.89■■□□□ 1.09
CTDSP1-215ENST00000498160 CHMP3Q9Y3E7 222 aa21.89■■□□□ 1.09
CTDSP1-215ENST00000498160 IRX6P78412 446 aaPredicted RBP21.88■■□□□ 1.09
CTDSP1-215ENST00000498160 EPHA10Q5JZY3 1008 aa21.88■■□□□ 1.09
CTDSP1-215ENST00000498160 CEP85Q6P2H3 762 aa21.88■■□□□ 1.09
CTDSP1-215ENST00000498160 CCDC24Q8N4L8 307 aa21.88■■□□□ 1.09
CTDSP1-215ENST00000498160 CNKSR1Q969H4 720 aa21.88■■□□□ 1.09
CTDSP1-215ENST00000498160 DLEC1Q9Y238 1755 aa21.88■■□□□ 1.09
CTDSP1-215ENST00000498160 SRGAP3O43295 1099 aa21.87■■□□□ 1.09
CTDSP1-215ENST00000498160 ITGA6P23229 1130 aa21.86■■□□□ 1.09
CTDSP1-215ENST00000498160 IGHMBP2P38935 993 aaKnown RBP21.86■■□□□ 1.09
CTDSP1-215ENST00000498160 FAM161AQ3B820 660 aa21.86■■□□□ 1.09
CTDSP1-215ENST00000498160 TAF7LQ5H9L4 462 aa21.86■■□□□ 1.09
CTDSP1-215ENST00000498160 SSH3Q8TE77 659 aa21.86■■□□□ 1.09
CTDSP1-215ENST00000498160 C1orf115Q9H7X2 142 aa21.86■■□□□ 1.09
CTDSP1-215ENST00000498160 BBOX1O75936 387 aa21.85■■□□□ 1.09
CTDSP1-215ENST00000498160 GRAPQ13588 217 aa21.85■■□□□ 1.09
CTDSP1-215ENST00000498160 ANKRD18AQ8IVF6 992 aa21.85■■□□□ 1.09
CTDSP1-215ENST00000498160 GRAPLQ8TC17 118 aaPredicted RBP21.85■■□□□ 1.09
CTDSP1-215ENST00000498160 GREM2Q9H772 168 aa21.85■■□□□ 1.09
CTDSP1-215ENST00000498160 COL11A2P13942 1736 aaPredicted RBP21.84■■□□□ 1.09
CTDSP1-215ENST00000498160 POLA2Q14181 598 aa21.84■■□□□ 1.09
CTDSP1-215ENST00000498160 HSP90AB4PQ58FF6 505 aa21.84■■□□□ 1.09
CTDSP1-215ENST00000498160 C3orf67Q6ZVT6 689 aa21.84■■□□□ 1.09
CTDSP1-215ENST00000498160 KLHL34Q8N239 644 aa21.84■■□□□ 1.09
CTDSP1-215ENST00000498160 TMX4Q9H1E5 349 aaPredicted RBP21.84■■□□□ 1.09
CTDSP1-215ENST00000498160 MPHOSPH8Q99549 860 aa21.83■■□□□ 1.09
CTDSP1-215ENST00000498160 COPRSQ9NQ92 184 aa21.83■■□□□ 1.09
CTDSP1-215ENST00000498160 PIM2Q9P1W9 311 aa21.83■■□□□ 1.09
CTDSP1-215ENST00000498160 RPS8P62241 208 aaKnown RBP21.82■■□□□ 1.08
CTDSP1-215ENST00000498160 GRIPAP1Q4V328 841 aa21.82■■□□□ 1.08
CTDSP1-215ENST00000498160 ZNF622Q969S3 477 aaKnown RBP eCLIP21.82■■□□□ 1.08
CTDSP1-215ENST00000498160 RWDD1Q9H446 243 aaPredicted RBP21.82■■□□□ 1.08
CTDSP1-215ENST00000498160 KIAA1551Q9HCM1 1747 aa21.81■■□□□ 1.08
CTDSP1-215ENST00000498160 DPEP1P16444 411 aa21.81■■□□□ 1.08
CTDSP1-215ENST00000498160 HDAC1Q13547 482 aaPredicted RBP21.81■■□□□ 1.08
CTDSP1-215ENST00000498160 TTLL6Q8N841 843 aa21.81■■□□□ 1.08
CTDSP1-215ENST00000498160 FHDC1Q9C0D6 1143 aaPredicted RBP21.81■■□□□ 1.08
CTDSP1-215ENST00000498160 BSDC1Q9NW68 430 aaPredicted RBP21.81■■□□□ 1.08
CTDSP1-215ENST00000498160 PNMA6EA0A0J9YXQ4 647 aa21.8■■□□□ 1.08
CTDSP1-215ENST00000498160 CIAO1O76071 339 aa21.8■■□□□ 1.08
CTDSP1-215ENST00000498160 RFX5P48382 616 aaPredicted RBP21.8■■□□□ 1.08
CTDSP1-215ENST00000498160 SOGA3Q5TF21 947 aa21.8■■□□□ 1.08
CTDSP1-215ENST00000498160 CC2D2BQ6DHV5 1058 aa21.8■■□□□ 1.08
CTDSP1-215ENST00000498160 CCDC85AQ96PX6 553 aaPredicted RBP21.8■■□□□ 1.08
CTDSP1-215ENST00000498160 PCDHB15Q9Y5E8 787 aa21.8■■□□□ 1.08
CTDSP1-215ENST00000498160 CHRNA5P30532 468 aa21.79■■□□□ 1.08
CTDSP1-215ENST00000498160 PTPN12Q05209 780 aaKnown RBP21.79■■□□□ 1.08
CTDSP1-215ENST00000498160 LDHAL6AQ6ZMR3 332 aa21.79■■□□□ 1.08
CTDSP1-215ENST00000498160 ERC1Q8IUD2 1116 aa21.79■■□□□ 1.08
CTDSP1-215ENST00000498160 SEC31BQ9NQW1 1179 aa21.79■■□□□ 1.08
CTDSP1-215ENST00000498160 NOP58Q9Y2X3 529 aaKnown RBP21.79■■□□□ 1.08
CTDSP1-215ENST00000498160 PPEF1O14829 653 aaPredicted RBP21.78■■□□□ 1.08
CTDSP1-215ENST00000498160 G3BP1Q13283 466 aaKnown RBP eCLIP21.78■■□□□ 1.08
CTDSP1-215ENST00000498160 SYT17Q9BSW7 474 aa21.78■■□□□ 1.08
CTDSP1-215ENST00000498160 CNNM1Q9NRU3 951 aa21.78■■□□□ 1.08
CTDSP1-215ENST00000498160 MROH5Q6ZUA9 1318 aa21.78■■□□□ 1.08
CTDSP1-215ENST00000498160 A0A0G2JLW4 131 aa21.77■■□□□ 1.08
CTDSP1-215ENST00000498160 EYA2O00167 538 aa21.77■■□□□ 1.08
CTDSP1-215ENST00000498160 IL15P40933 162 aaPredicted RBP21.77■■□□□ 1.08
CTDSP1-215ENST00000498160 DALRD3Q5D0E6 543 aaKnown RBP21.77■■□□□ 1.08
CTDSP1-215ENST00000498160 CELF1Q92879 486 aaKnown RBP21.77■■□□□ 1.08
CTDSP1-215ENST00000498160 GCC1Q96CN9 775 aa21.77■■□□□ 1.08
CTDSP1-215ENST00000498160 RAB11FIP3O75154 756 aa21.76■■□□□ 1.07
CTDSP1-215ENST00000498160 BRCA1P38398 1863 aaKnown RBP21.76■■□□□ 1.07
CTDSP1-215ENST00000498160 PRPF40BQ6NWY9 871 aaKnown RBP21.76■■□□□ 1.07
CTDSP1-215ENST00000498160 SIRT2Q8IXJ6 389 aa21.76■■□□□ 1.07
CTDSP1-215ENST00000498160 SP8Q8IXZ3 490 aa21.76■■□□□ 1.07
CTDSP1-215ENST00000498160 ANKRD2Q9GZV1 360 aa21.76■■□□□ 1.07
CTDSP1-215ENST00000498160 SURF6O75683 361 aaKnown RBP21.75■■□□□ 1.07
CTDSP1-215ENST00000498160 KCNA3P22001 575 aa21.75■■□□□ 1.07
CTDSP1-215ENST00000498160 OS9Q13438 667 aaPredicted RBP21.75■■□□□ 1.07
CTDSP1-215ENST00000498160 PPP4R2Q9NY27 417 aa21.75■■□□□ 1.07
CTDSP1-215ENST00000498160 ATP6V0A2Q9Y487 856 aa21.75■■□□□ 1.07
CTDSP1-215ENST00000498160 DCTPP1Q9H773 170 aa21.74■■□□□ 1.07
CTDSP1-215ENST00000498160 LRRC37AA6NMS7 1700 aa21.74■■□□□ 1.07
CTDSP1-215ENST00000498160 NLGN2Q8NFZ4 835 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms