RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 USP42Q9H9J4 1324 aaKnown RBP15.02■□□□□ -0
AFF3-215ENST00000498090 ALDH1L1O75891 902 aa15.02□□□□□ -0.01
AFF3-215ENST00000498090 MBD3O95983 291 aa15.02□□□□□ -0.01
AFF3-215ENST00000498090 CWF19L2Q2TBE0 894 aaKnown RBP15.02□□□□□ -0.01
AFF3-215ENST00000498090 GAS2L3Q86XJ1 694 aa15.02□□□□□ -0.01
AFF3-215ENST00000498090 ARXQ96QS3 562 aa15.02□□□□□ -0.01
AFF3-215ENST00000498090 MYD88Q99836 296 aa15.02□□□□□ -0.01
AFF3-215ENST00000498090 ANO2Q9NQ90 1003 aa15.02□□□□□ -0.01
AFF3-215ENST00000498090 TUBGCP6Q96RT7 1819 aa15.02□□□□□ -0.01
AFF3-215ENST00000498090 TTC41PQ6P2S7 1318 aa15.02□□□□□ -0.01
AFF3-215ENST00000498090 GNPATO15228 680 aa15.01□□□□□ -0.01
AFF3-215ENST00000498090 SURF6O75683 361 aaKnown RBP15.01□□□□□ -0.01
AFF3-215ENST00000498090 MTX1Q13505 466 aa15.01□□□□□ -0.01
AFF3-215ENST00000498090 KIF6Q6ZMV9 814 aa15.01□□□□□ -0.01
AFF3-215ENST00000498090 PPP1R42Q7Z4L9 355 aa15.01□□□□□ -0.01
AFF3-215ENST00000498090 DZIP3Q86Y13 1208 aaKnown RBP15.01□□□□□ -0.01
AFF3-215ENST00000498090 RHPN1Q8TCX5 695 aa15.01□□□□□ -0.01
AFF3-215ENST00000498090 PPP1R9BQ96SB3 815 aa15.01□□□□□ -0.01
AFF3-215ENST00000498090 TBC1D2BQ9UPU7 963 aa15.01□□□□□ -0.01
AFF3-215ENST00000498090 RPS6KA4O75676 772 aa15□□□□□ -0.01
AFF3-215ENST00000498090 HSPA4P34932 840 aa15□□□□□ -0.01
AFF3-215ENST00000498090 NASPP49321 788 aaPredicted RBP15□□□□□ -0.01
AFF3-215ENST00000498090 HLFQ16534 295 aa15□□□□□ -0.01
AFF3-215ENST00000498090 CNTROBQ8N137 903 aa15□□□□□ -0.01
AFF3-215ENST00000498090 LINS1Q8NG48 757 aa15□□□□□ -0.01
AFF3-215ENST00000498090 NEURL1BA8MQ27 555 aa15□□□□□ -0.01
AFF3-215ENST00000498090 ATP5J2-PTCD1G3V325 749 aa15□□□□□ -0.01
AFF3-215ENST00000498090 SRGAP3O43295 1099 aa15□□□□□ -0.01
AFF3-215ENST00000498090 CAMTA2O94983 1202 aa15□□□□□ -0.01
AFF3-215ENST00000498090 ERC1Q8IUD2 1116 aa15□□□□□ -0.01
AFF3-215ENST00000498090 ZGPATQ8N5A5 531 aaKnown RBP15□□□□□ -0.01
AFF3-215ENST00000498090 BCORQ6W2J9 1755 aa14.99□□□□□ -0.01
AFF3-215ENST00000498090 SCN7AQ01118 1682 aa14.99□□□□□ -0.01
AFF3-215ENST00000498090 ESPNB1AK53 854 aa14.99□□□□□ -0.01
AFF3-215ENST00000498090 BRD1O95696 1058 aa14.99□□□□□ -0.01
AFF3-215ENST00000498090 KLHL34Q8N239 644 aa14.99□□□□□ -0.01
AFF3-215ENST00000498090 AK7Q96M32 723 aa14.99□□□□□ -0.01
AFF3-215ENST00000498090 ERVV-1B6SEH8 477 aa14.98□□□□□ -0.01
AFF3-215ENST00000498090 GLRX3O76003 335 aaKnown RBP14.98□□□□□ -0.01
AFF3-215ENST00000498090 ZNF827Q17R98 1081 aa14.98□□□□□ -0.01
AFF3-215ENST00000498090 HS1BP3Q53T59 392 aa14.98□□□□□ -0.01
AFF3-215ENST00000498090 GIGYF2Q6Y7W6 1299 aaKnown RBP14.98□□□□□ -0.01
AFF3-215ENST00000498090 RUFY2Q8WXA3 655 aa14.98□□□□□ -0.01
AFF3-215ENST00000498090 GPATCH3Q96I76 525 aa14.98□□□□□ -0.01
AFF3-215ENST00000498090 ISCA1Q9BUE6 129 aa14.98□□□□□ -0.01
AFF3-215ENST00000498090 ZDHHC9Q9Y397 364 aa14.98□□□□□ -0.01
AFF3-215ENST00000498090 UBR3Q6ZT12 1888 aa14.98□□□□□ -0.01
AFF3-215ENST00000498090 C4AP0C0L4 1744 aa14.98□□□□□ -0.01
AFF3-215ENST00000498090 NEXNQ0ZGT2 675 aa14.97□□□□□ -0.01
AFF3-215ENST00000498090 TCIRG1Q13488 830 aa14.97□□□□□ -0.01
AFF3-215ENST00000498090 ZSCAN23Q3MJ62 389 aa14.97□□□□□ -0.01
AFF3-215ENST00000498090 PI4K2BQ8TCG2 481 aa14.97□□□□□ -0.01
AFF3-215ENST00000498090 RTCBQ9Y3I0 505 aaKnown RBP14.97□□□□□ -0.01
AFF3-215ENST00000498090 RAD50Q92878 1312 aa14.97□□□□□ -0.01
AFF3-215ENST00000498090 SGSM2O43147 1006 aa14.97□□□□□ -0.01
AFF3-215ENST00000498090 NBPF7P0C2Y1 421 aaPredicted RBP14.97□□□□□ -0.01
AFF3-215ENST00000498090 SYAP1Q96A49 352 aaPredicted RBP14.97□□□□□ -0.01
AFF3-215ENST00000498090 AKT1S1Q96B36 256 aa14.97□□□□□ -0.01
AFF3-215ENST00000498090 A0A087WZG4 1122 aa14.96□□□□□ -0.01
AFF3-215ENST00000498090 PRPF40AO75400 957 aaKnown RBP14.96□□□□□ -0.01
AFF3-215ENST00000498090 PHF14O94880 888 aa14.96□□□□□ -0.01
AFF3-215ENST00000498090 PKP1Q13835 747 aa14.96□□□□□ -0.01
AFF3-215ENST00000498090 GCKRQ14397 625 aa14.96□□□□□ -0.01
AFF3-215ENST00000498090 TSHZ3Q63HK5 1081 aa14.96□□□□□ -0.01
AFF3-215ENST00000498090 CAVIN1Q6NZI2 390 aaKnown RBP14.96□□□□□ -0.01
AFF3-215ENST00000498090 KIAA1211Q6ZU35 1233 aa14.96□□□□□ -0.01
AFF3-215ENST00000498090 CLASRPQ8N2M8 674 aaKnown RBP14.96□□□□□ -0.01
AFF3-215ENST00000498090 BCL2L12Q9HB09 334 aa14.96□□□□□ -0.01
AFF3-215ENST00000498090 SRP68Q9UHB9 627 aaKnown RBP14.96□□□□□ -0.01
AFF3-215ENST00000498090 ANKRD36CQ5JPF3 1778 aa14.95□□□□□ -0.02
AFF3-215ENST00000498090 AFDNP55196 1824 aaKnown RBP14.95□□□□□ -0.02
AFF3-215ENST00000498090 ARHGEF1Q92888 912 aaKnown RBP14.95□□□□□ -0.02
AFF3-215ENST00000498090 ANO8Q9HCE9 1232 aaPredicted RBP14.95□□□□□ -0.02
AFF3-215ENST00000498090 IL1RAPL2Q9NP60 686 aa14.95□□□□□ -0.02
AFF3-215ENST00000498090 PALD1Q9ULE6 856 aa14.95□□□□□ -0.02
AFF3-215ENST00000498090 UTYO14607 1347 aa14.95□□□□□ -0.02
AFF3-215ENST00000498090 WDR33Q9C0J8 1336 aaKnown RBP14.95□□□□□ -0.02
AFF3-215ENST00000498090 UBN2Q6ZU65 1347 aa14.94□□□□□ -0.02
AFF3-215ENST00000498090 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.94□□□□□ -0.02
AFF3-215ENST00000498090 GRM8O00222 908 aa14.94□□□□□ -0.02
AFF3-215ENST00000498090 PDIA4P13667 645 aaKnown RBP14.94□□□□□ -0.02
AFF3-215ENST00000498090 NCLP19338 710 aaKnown RBP14.94□□□□□ -0.02
AFF3-215ENST00000498090 GPTP24298 496 aa14.94□□□□□ -0.02
AFF3-215ENST00000498090 NUTM1Q86Y26 1132 aa14.94□□□□□ -0.02
AFF3-215ENST00000498090 NARFQ9UHQ1 456 aa14.94□□□□□ -0.02
AFF3-215ENST00000498090 NUP98P52948 1817 aa14.94□□□□□ -0.02
AFF3-215ENST00000498090 HIP1O00291 1037 aa14.93□□□□□ -0.02
AFF3-215ENST00000498090 CASP7P55210 303 aa14.93□□□□□ -0.02
AFF3-215ENST00000498090 TRIM28Q13263 835 aaKnown RBP14.93□□□□□ -0.02
AFF3-215ENST00000498090 HSP90AB3PQ58FF7 597 aa14.93□□□□□ -0.02
AFF3-215ENST00000498090 ZNF34Q8IZ26 560 aa14.93□□□□□ -0.02
AFF3-215ENST00000498090 JARID2Q92833 1246 aaPredicted RBP14.93□□□□□ -0.02
AFF3-215ENST00000498090 CWC25Q9NXE8 425 aaPredicted RBP14.93□□□□□ -0.02
AFF3-215ENST00000498090 TRAPPC3LQ5T215 181 aa14.93□□□□□ -0.02
AFF3-215ENST00000498090 USPL1Q5W0Q7 1092 aa14.93□□□□□ -0.02
AFF3-215ENST00000498090 LRSAM1Q6UWE0 723 aa14.93□□□□□ -0.02
AFF3-215ENST00000498090 NLRP10Q86W26 655 aa14.93□□□□□ -0.02
AFF3-215ENST00000498090 CCDC191Q8NCU4 936 aa14.93□□□□□ -0.02
AFF3-215ENST00000498090 SUCLG2Q96I99 432 aa14.93□□□□□ -0.02
AFF3-215ENST00000498090 C9orf78Q9NZ63 289 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms