RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CDCA7LQ96GN5 454 aa14.43□□□□□ -0.1
ERCC8-208ENST00000497892 PIM2Q9P1W9 311 aa14.43□□□□□ -0.1
ERCC8-208ENST00000497892 CACNA1SQ13698 1873 aa14.43□□□□□ -0.1
ERCC8-208ENST00000497892 H0YIN7 160 aa14.42□□□□□ -0.1
ERCC8-208ENST00000497892 GRIN3BO60391 1043 aa14.42□□□□□ -0.1
ERCC8-208ENST00000497892 DDX58O95786 925 aaKnown RBP14.42□□□□□ -0.1
ERCC8-208ENST00000497892 TRMT2AQ8IZ69 625 aaKnown RBP14.42□□□□□ -0.1
ERCC8-208ENST00000497892 DDX60Q8IY21 1712 aaKnown RBP14.41□□□□□ -0.1
ERCC8-208ENST00000497892 KLRG2A4D1S0 409 aaPredicted RBP14.41□□□□□ -0.1
ERCC8-208ENST00000497892 GTF2E1P29083 439 aaPredicted RBP14.41□□□□□ -0.1
ERCC8-208ENST00000497892 HNRNPUQ00839 825 aaKnown RBP eCLIP14.41□□□□□ -0.1
ERCC8-208ENST00000497892 ERFEQ4G0M1 354 aa14.41□□□□□ -0.1
ERCC8-208ENST00000497892 DALRD3Q5D0E6 543 aaKnown RBP14.41□□□□□ -0.1
ERCC8-208ENST00000497892 G2E3Q7L622 706 aa14.41□□□□□ -0.1
ERCC8-208ENST00000497892 PPP1R42Q7Z4L9 355 aa14.41□□□□□ -0.1
ERCC8-208ENST00000497892 RIC3Q7Z5B4 369 aa14.41□□□□□ -0.1
ERCC8-208ENST00000497892 NUTM1Q86Y26 1132 aa14.41□□□□□ -0.1
ERCC8-208ENST00000497892 ISCA1Q9BUE6 129 aa14.41□□□□□ -0.1
ERCC8-208ENST00000497892 BCS1LQ9Y276 419 aa14.41□□□□□ -0.1
ERCC8-208ENST00000497892 ADCY9O60503 1353 aa14.41□□□□□ -0.1
ERCC8-208ENST00000497892 SRGNP10124 158 aa14.4□□□□□ -0.1
ERCC8-208ENST00000497892 FLIIQ13045 1269 aa14.4□□□□□ -0.1
ERCC8-208ENST00000497892 TRIM28Q13263 835 aaKnown RBP14.4□□□□□ -0.1
ERCC8-208ENST00000497892 KSR2Q6VAB6 950 aa14.4□□□□□ -0.1
ERCC8-208ENST00000497892 UTP14AQ9BVJ6 771 aaKnown RBP14.4□□□□□ -0.1
ERCC8-208ENST00000497892 PI4KAP2A4QPH2 592 aa14.39□□□□□ -0.11
ERCC8-208ENST00000497892 ATP5J2-PTCD1G3V325 749 aa14.39□□□□□ -0.11
ERCC8-208ENST00000497892 CRY2Q49AN0 593 aa14.39□□□□□ -0.11
ERCC8-208ENST00000497892 STYK1Q6J9G0 422 aa14.39□□□□□ -0.11
ERCC8-208ENST00000497892 PI4KAP1Q8N8J0 262 aa14.39□□□□□ -0.11
ERCC8-208ENST00000497892 MAP3K2Q9Y2U5 619 aa14.39□□□□□ -0.11
ERCC8-208ENST00000497892 SLX4Q8IY92 1834 aa14.38□□□□□ -0.11
ERCC8-208ENST00000497892 TTLL6Q8N841 843 aa14.38□□□□□ -0.11
ERCC8-208ENST00000497892 METTL22Q9BUU2 404 aaPredicted RBP14.38□□□□□ -0.11
ERCC8-208ENST00000497892 SH3TC1Q8TE82 1336 aa14.38□□□□□ -0.11
ERCC8-208ENST00000497892 NPR1P16066 1061 aa14.37□□□□□ -0.11
ERCC8-208ENST00000497892 FKBP5Q13451 457 aaPredicted RBP14.37□□□□□ -0.11
ERCC8-208ENST00000497892 SLC10A5Q5PT55 438 aa14.37□□□□□ -0.11
ERCC8-208ENST00000497892 ZNF428Q96B54 188 aa14.37□□□□□ -0.11
ERCC8-208ENST00000497892 MASTLQ96GX5 879 aa14.37□□□□□ -0.11
ERCC8-208ENST00000497892 MYD88Q99836 296 aa14.37□□□□□ -0.11
ERCC8-208ENST00000497892 TRMT112Q9UI30 125 aaKnown RBP14.37□□□□□ -0.11
ERCC8-208ENST00000497892 ZBED9Q6R2W3 1325 aa14.37□□□□□ -0.11
ERCC8-208ENST00000497892 CT47B1P0C2W7 299 aaPredicted RBP14.36□□□□□ -0.11
ERCC8-208ENST00000497892 CCDC191Q8NCU4 936 aa14.36□□□□□ -0.11
ERCC8-208ENST00000497892 CNKSR1Q969H4 720 aa14.36□□□□□ -0.11
ERCC8-208ENST00000497892 ZNF622Q969S3 477 aaKnown RBP eCLIP14.36□□□□□ -0.11
ERCC8-208ENST00000497892 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.36□□□□□ -0.11
ERCC8-208ENST00000497892 FER1L6Q2WGJ9 1857 aa14.35□□□□□ -0.11
ERCC8-208ENST00000497892 NEXNQ0ZGT2 675 aa14.35□□□□□ -0.11
ERCC8-208ENST00000497892 PRPF40BQ6NWY9 871 aaKnown RBP14.35□□□□□ -0.11
ERCC8-208ENST00000497892 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
ERCC8-208ENST00000497892 IGKV5-2P06315 115 aa14.34□□□□□ -0.11
ERCC8-208ENST00000497892 HOXA10P31260 410 aaPredicted RBP14.34□□□□□ -0.11
ERCC8-208ENST00000497892 SYNE4Q8N205 404 aa14.34□□□□□ -0.11
ERCC8-208ENST00000497892 ZBTB38Q8NAP3 1195 aaPredicted RBP14.34□□□□□ -0.11
ERCC8-208ENST00000497892 DNAAF4Q8WXU2 420 aa14.34□□□□□ -0.11
ERCC8-208ENST00000497892 SSH1Q8WYL5 1049 aa14.34□□□□□ -0.11
ERCC8-208ENST00000497892 FAM89AQ96GI7 184 aa14.34□□□□□ -0.11
ERCC8-208ENST00000497892 L3MBTL3Q96JM7 780 aaPredicted RBP14.34□□□□□ -0.11
ERCC8-208ENST00000497892 NLRP3Q96P20 1036 aa14.34□□□□□ -0.11
ERCC8-208ENST00000497892 CWC25Q9NXE8 425 aaPredicted RBP14.34□□□□□ -0.11
ERCC8-208ENST00000497892 SBF1O95248 1867 aa14.33□□□□□ -0.11
ERCC8-208ENST00000497892 MYH3P11055 1940 aa14.33□□□□□ -0.11
ERCC8-208ENST00000497892 NEURL1BA8MQ27 555 aa14.33□□□□□ -0.12
ERCC8-208ENST00000497892 HCLS1P14317 486 aaPredicted RBP14.33□□□□□ -0.12
ERCC8-208ENST00000497892 ALDH1L2Q3SY69 923 aa14.33□□□□□ -0.12
ERCC8-208ENST00000497892 MRPL50Q8N5N7 158 aaKnown RBP14.33□□□□□ -0.12
ERCC8-208ENST00000497892 RPGRQ92834 1020 aaKnown RBP14.33□□□□□ -0.12
ERCC8-208ENST00000497892 PCCAP05165 728 aaPredicted RBP14.32□□□□□ -0.12
ERCC8-208ENST00000497892 YY1P25490 414 aa14.32□□□□□ -0.12
ERCC8-208ENST00000497892 CWF19L2Q2TBE0 894 aaKnown RBP14.32□□□□□ -0.12
ERCC8-208ENST00000497892 ARHGAP27Q6ZUM4 889 aa14.32□□□□□ -0.12
ERCC8-208ENST00000497892 LINS1Q8NG48 757 aa14.32□□□□□ -0.12
ERCC8-208ENST00000497892 F6X3S4 739 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 C21orf2O43822 256 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 ALDH1B1P30837 517 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 RTL5Q5HYW3 569 aaPredicted RBP14.31□□□□□ -0.12
ERCC8-208ENST00000497892 C7orf43Q8WVR3 580 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 CRAMP1Q96RY5 1269 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 BCL2L13Q9BXK5 485 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 PLSCR2Q9NRY7 297 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 PCDH10Q9P2E7 1040 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 LRRC37AA6NMS7 1700 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 PTPRCP08575 1304 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 CDHR2Q9BYE9 1310 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 SNED1Q8TER0 1413 aa14.31□□□□□ -0.12
ERCC8-208ENST00000497892 TIAM2Q8IVF5 1701 aa14.3□□□□□ -0.12
ERCC8-208ENST00000497892 TAF1P21675 1872 aa14.3□□□□□ -0.12
ERCC8-208ENST00000497892 NFKBIEO00221 500 aa14.3□□□□□ -0.12
ERCC8-208ENST00000497892 IRS4O14654 1257 aaPredicted RBP14.3□□□□□ -0.12
ERCC8-208ENST00000497892 SOGA3Q5TF21 947 aa14.3□□□□□ -0.12
ERCC8-208ENST00000497892 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
ERCC8-208ENST00000497892 RBM17Q96I25 401 aaKnown RBP14.3□□□□□ -0.12
ERCC8-208ENST00000497892 SMC4Q9NTJ3 1288 aa14.3□□□□□ -0.12
ERCC8-208ENST00000497892 CCDC88AQ3V6T2 1871 aa14.29□□□□□ -0.12
ERCC8-208ENST00000497892 HSP90B1P14625 803 aaKnown RBP14.29□□□□□ -0.12
ERCC8-208ENST00000497892 GCKRQ14397 625 aa14.29□□□□□ -0.12
ERCC8-208ENST00000497892 SF3B3Q15393 1217 aaKnown RBP14.29□□□□□ -0.12
ERCC8-208ENST00000497892 BEND3Q5T5X7 828 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms