RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 PGAP2Q9UHJ9 254 aa28.53■■■□□ 2.16
CLIC4-204ENST00000497755 TRMT112Q9UI30 125 aaKnown RBP28.53■■■□□ 2.16
CLIC4-204ENST00000497755 ANKRD36CQ5JPF3 1778 aa28.52■■■□□ 2.16
CLIC4-204ENST00000497755 CIAPIN1Q6FI81 312 aa28.52■■■□□ 2.16
CLIC4-204ENST00000497755 DDX46Q7L014 1031 aaKnown RBP28.52■■■□□ 2.16
CLIC4-204ENST00000497755 LMOD3Q0VAK6 560 aa28.51■■■□□ 2.15
CLIC4-204ENST00000497755 ABHD8Q96I13 439 aa28.51■■■□□ 2.15
CLIC4-204ENST00000497755 TAF1P21675 1872 aa28.51■■■□□ 2.15
CLIC4-204ENST00000497755 SH3TC1Q8TE82 1336 aa28.5■■■□□ 2.15
CLIC4-204ENST00000497755 RAD17O75943 681 aa28.5■■■□□ 2.15
CLIC4-204ENST00000497755 HIRAP54198 1017 aaPredicted RBP28.5■■■□□ 2.15
CLIC4-204ENST00000497755 GRAPQ13588 217 aa28.5■■■□□ 2.15
CLIC4-204ENST00000497755 KRT24Q2M2I5 525 aa28.5■■■□□ 2.15
CLIC4-204ENST00000497755 SAPCD2Q86UD0 394 aa28.5■■■□□ 2.15
CLIC4-204ENST00000497755 GRAPLQ8TC17 118 aaPredicted RBP28.5■■■□□ 2.15
CLIC4-204ENST00000497755 GLIS2Q9BZE0 524 aaPredicted RBP28.5■■■□□ 2.15
CLIC4-204ENST00000497755 THSD7BQ9C0I4 1608 aa28.5■■■□□ 2.15
CLIC4-204ENST00000497755 CHL1O00533 1208 aa28.49■■■□□ 2.15
CLIC4-204ENST00000497755 TNIP1Q15025 636 aa28.49■■■□□ 2.15
CLIC4-204ENST00000497755 BEGAINQ9BUH8 593 aa28.49■■■□□ 2.15
CLIC4-204ENST00000497755 AOC2O75106 756 aa28.48■■■□□ 2.15
CLIC4-204ENST00000497755 CELF2O95319 508 aaKnown RBP28.48■■■□□ 2.15
CLIC4-204ENST00000497755 MAP2K2P36507 400 aa28.48■■■□□ 2.15
CLIC4-204ENST00000497755 ZNF428Q96B54 188 aa28.48■■■□□ 2.15
CLIC4-204ENST00000497755 YDJCA8MPS7 323 aa28.47■■■□□ 2.15
CLIC4-204ENST00000497755 RALBP1Q15311 655 aa28.47■■■□□ 2.15
CLIC4-204ENST00000497755 ZC3H15Q8WU90 426 aaKnown RBP28.47■■■□□ 2.15
CLIC4-204ENST00000497755 BCL2L13Q9BXK5 485 aa28.47■■■□□ 2.15
CLIC4-204ENST00000497755 CDHR2Q9BYE9 1310 aa28.46■■■□□ 2.15
CLIC4-204ENST00000497755 NEUROD2Q15784 382 aa28.46■■■□□ 2.15
CLIC4-204ENST00000497755 TRPM4Q8TD43 1214 aa28.45■■■□□ 2.14
CLIC4-204ENST00000497755 CHPF2Q9P2E5 772 aa28.45■■■□□ 2.14
CLIC4-204ENST00000497755 CNOT7Q9UIV1 285 aaKnown RBP28.45■■■□□ 2.14
CLIC4-204ENST00000497755 SHTN1A0MZ66 631 aa28.44■■■□□ 2.14
CLIC4-204ENST00000497755 TMC4Q7Z404 712 aa28.44■■■□□ 2.14
CLIC4-204ENST00000497755 CCDC146Q8IYE0 955 aa28.44■■■□□ 2.14
CLIC4-204ENST00000497755 HHIPL1Q96JK4 782 aa28.44■■■□□ 2.14
CLIC4-204ENST00000497755 PLBD2Q8NHP8 589 aa28.43■■■□□ 2.14
CLIC4-204ENST00000497755 TSKSQ9UJT2 592 aa28.43■■■□□ 2.14
CLIC4-204ENST00000497755 TRIM35Q9UPQ4 493 aa28.43■■■□□ 2.14
CLIC4-204ENST00000497755 CDC37L1Q7L3B6 337 aa28.42■■■□□ 2.14
CLIC4-204ENST00000497755 ISCA1Q9BUE6 129 aa28.42■■■□□ 2.14
CLIC4-204ENST00000497755 LAS1LQ9Y4W2 734 aaKnown RBP28.42■■■□□ 2.14
CLIC4-204ENST00000497755 DUOX1Q9NRD9 1551 aa28.41■■■□□ 2.14
CLIC4-204ENST00000497755 SF3B3Q15393 1217 aaKnown RBP28.41■■■□□ 2.14
CLIC4-204ENST00000497755 ANKRD13DQ6ZTN6 518 aa28.41■■■□□ 2.14
CLIC4-204ENST00000497755 FAM89AQ96GI7 184 aa28.41■■■□□ 2.14
CLIC4-204ENST00000497755 H7C1D1 291 aa28.4■■■□□ 2.14
CLIC4-204ENST00000497755 CELF1Q92879 486 aaKnown RBP28.4■■■□□ 2.14
CLIC4-204ENST00000497755 ZNF408Q9H9D4 720 aa28.4■■■□□ 2.14
CLIC4-204ENST00000497755 ZBTB12Q9Y330 459 aaPredicted RBP28.4■■■□□ 2.14
CLIC4-204ENST00000497755 ATP5J2-PTCD1G3V325 749 aa28.39■■■□□ 2.14
CLIC4-204ENST00000497755 WASHC4Q2M389 1173 aa28.39■■■□□ 2.14
CLIC4-204ENST00000497755 HDGFL1Q5TGJ6 251 aa28.39■■■□□ 2.14
CLIC4-204ENST00000497755 MICALL2Q8IY33 904 aa28.39■■■□□ 2.14
CLIC4-204ENST00000497755 DPF2Q92785 391 aa28.39■■■□□ 2.14
CLIC4-204ENST00000497755 NSFL1CQ9UNZ2 370 aaKnown RBP28.39■■■□□ 2.14
CLIC4-204ENST00000497755 DDX60Q8IY21 1712 aaKnown RBP28.38■■■□□ 2.13
CLIC4-204ENST00000497755 USP48Q86UV5 1035 aa28.38■■■□□ 2.13
CLIC4-204ENST00000497755 LRRC37AA6NMS7 1700 aa28.38■■■□□ 2.13
CLIC4-204ENST00000497755 PSMD14O00487 310 aa28.37■■■□□ 2.13
CLIC4-204ENST00000497755 DLK2Q6UY11 383 aa28.37■■■□□ 2.13
CLIC4-204ENST00000497755 RUNDC1Q96C34 613 aa28.37■■■□□ 2.13
CLIC4-204ENST00000497755 DBF4Q9UBU7 674 aaPredicted RBP28.37■■■□□ 2.13
CLIC4-204ENST00000497755 POLLQ9UGP5 575 aa28.37■■■□□ 2.13
CLIC4-204ENST00000497755 HOXB7P09629 217 aa28.36■■■□□ 2.13
CLIC4-204ENST00000497755 SAMD7Q7Z3H4 446 aa28.36■■■□□ 2.13
CLIC4-204ENST00000497755 DBNDD1Q9H9R9 158 aa28.36■■■□□ 2.13
CLIC4-204ENST00000497755 POLR2AP24928 1970 aaKnown RBP28.35■■■□□ 2.13
CLIC4-204ENST00000497755 RIMBP2O15034 1052 aa28.35■■■□□ 2.13
CLIC4-204ENST00000497755 CA12O43570 354 aa28.35■■■□□ 2.13
CLIC4-204ENST00000497755 BRPF1P55201 1214 aaPredicted RBP28.35■■■□□ 2.13
CLIC4-204ENST00000497755 GPSM2P81274 684 aa28.35■■■□□ 2.13
CLIC4-204ENST00000497755 KCNQ5Q9NR82 932 aa28.35■■■□□ 2.13
CLIC4-204ENST00000497755 CASP8AP2Q9UKL3 1982 aa28.35■■■□□ 2.13
CLIC4-204ENST00000497755 CCDC85CA6NKD9 419 aa28.34■■■□□ 2.13
CLIC4-204ENST00000497755 TRIM28Q13263 835 aaKnown RBP28.34■■■□□ 2.13
CLIC4-204ENST00000497755 RTL5Q5HYW3 569 aaPredicted RBP28.34■■■□□ 2.13
CLIC4-204ENST00000497755 COL4A1P02462 1669 aa28.33■■■□□ 2.13
CLIC4-204ENST00000497755 C6orf229H3BNL8 230 aa28.33■■■□□ 2.13
CLIC4-204ENST00000497755 EGFRP00533 1210 aa28.33■■■□□ 2.13
CLIC4-204ENST00000497755 FAM161AQ3B820 660 aa28.33■■■□□ 2.13
CLIC4-204ENST00000497755 HYPKQ9NX55 129 aa28.33■■■□□ 2.13
CLIC4-204ENST00000497755 MYBBP1AQ9BQG0 1328 aaKnown RBP28.33■■■□□ 2.13
CLIC4-204ENST00000497755 TBC1D10BQ4KMP7 808 aaPredicted RBP28.32■■■□□ 2.12
CLIC4-204ENST00000497755 DUSP27Q5VZP5 1158 aa28.32■■■□□ 2.12
CLIC4-204ENST00000497755 ZIC5Q96T25 663 aa28.32■■■□□ 2.12
CLIC4-204ENST00000497755 IRS4O14654 1257 aaPredicted RBP28.31■■■□□ 2.12
CLIC4-204ENST00000497755 RPS8P62241 208 aaKnown RBP28.31■■■□□ 2.12
CLIC4-204ENST00000497755 DOK7Q18PE1 504 aa28.31■■■□□ 2.12
CLIC4-204ENST00000497755 CFAP44Q96MT7 982 aa28.31■■■□□ 2.12
CLIC4-204ENST00000497755 ADAMTS8Q9UP79 889 aa28.31■■■□□ 2.12
CLIC4-204ENST00000497755 HUNKP57058 714 aa28.3■■■□□ 2.12
CLIC4-204ENST00000497755 NOGQ13253 232 aa28.3■■■□□ 2.12
CLIC4-204ENST00000497755 TBC1D16Q8TBP0 767 aa28.3■■■□□ 2.12
CLIC4-204ENST00000497755 RTL9Q8NET4 1388 aa28.29■■■□□ 2.12
CLIC4-204ENST00000497755 ECE2O60344 883 aa28.29■■■□□ 2.12
CLIC4-204ENST00000497755 RPS12P25398 132 aaKnown RBP28.29■■■□□ 2.12
CLIC4-204ENST00000497755 RGS19P49795 217 aa28.29■■■□□ 2.12
CLIC4-204ENST00000497755 WDR43Q15061 677 aaKnown RBP eCLIP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms