RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 NASPP49321 788 aaPredicted RBP13.93□□□□□ -0.18
SNRNP200-208ENST00000497539 DNAJC10Q8IXB1 793 aa13.93□□□□□ -0.18
SNRNP200-208ENST00000497539 LRP5O75197 1615 aa13.93□□□□□ -0.18
SNRNP200-208ENST00000497539 NUP98P52948 1817 aa13.93□□□□□ -0.18
SNRNP200-208ENST00000497539 CDHR2Q9BYE9 1310 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 LAMB2P55268 1798 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 CLGNO14967 610 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 CIAO1O76071 339 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 IRX3P78415 501 aaPredicted RBP13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 ISY1Q9ULR0 285 aaKnown RBP13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 JCADQ9P266 1359 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 THSD7AQ9UPZ6 1657 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 MAP3K15Q6ZN16 1313 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 ATP5J2-PTCD1G3V325 749 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 ST18O60284 1047 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 HSPA4P34932 840 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 MCM2P49736 904 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 MCTP1Q6DN14 999 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 MYH3P11055 1940 aa13.92□□□□□ -0.18
SNRNP200-208ENST00000497539 BCORQ6W2J9 1755 aa13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 BAG4O95429 457 aaKnown RBP13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 PKP1Q13835 747 aa13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 KIF6Q6ZMV9 814 aa13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 KCNB2Q92953 911 aa13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 CHAMP1Q96JM3 812 aa13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 VGLL3A8MV65 326 aa13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 KIF20AO95235 890 aa13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 PCCAP05165 728 aaPredicted RBP13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 HSP90AB3PQ58FF7 597 aa13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 RUFY2Q8WXA3 655 aa13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 SLC4A9Q96Q91 983 aa13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 LSG1Q9H089 658 aaKnown RBP13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.91□□□□□ -0.18
SNRNP200-208ENST00000497539 ATP5JP18859 108 aa13.9□□□□□ -0.18
SNRNP200-208ENST00000497539 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.18
SNRNP200-208ENST00000497539 ERVV-1B6SEH8 477 aa13.9□□□□□ -0.18
SNRNP200-208ENST00000497539 GRIPAP1Q4V328 841 aa13.9□□□□□ -0.18
SNRNP200-208ENST00000497539 TNNI3KQ59H18 835 aa13.9□□□□□ -0.18
SNRNP200-208ENST00000497539 CLEC17AQ6ZS10 378 aa13.9□□□□□ -0.18
SNRNP200-208ENST00000497539 FPGT-TNNI3KV9GXZ4 949 aa13.9□□□□□ -0.18
SNRNP200-208ENST00000497539 ZNF609O15014 1411 aa13.9□□□□□ -0.18
SNRNP200-208ENST00000497539 GOLGA6L22H0YM25 854 aa13.89□□□□□ -0.19
SNRNP200-208ENST00000497539 IL6STP40189 918 aaPredicted RBP13.89□□□□□ -0.19
SNRNP200-208ENST00000497539 CAVIN1Q6NZI2 390 aaKnown RBP13.89□□□□□ -0.19
SNRNP200-208ENST00000497539 GIGYF2Q6Y7W6 1299 aaKnown RBP13.89□□□□□ -0.19
SNRNP200-208ENST00000497539 ANP32BQ92688 251 aaKnown RBP13.89□□□□□ -0.19
SNRNP200-208ENST00000497539 DDB1Q16531 1140 aa13.89□□□□□ -0.19
SNRNP200-208ENST00000497539 LMBR1LQ6UX01 489 aa13.89□□□□□ -0.19
SNRNP200-208ENST00000497539 IL25Q9H293 177 aa13.89□□□□□ -0.19
SNRNP200-208ENST00000497539 ATG9AQ7Z3C6 839 aa13.88□□□□□ -0.19
SNRNP200-208ENST00000497539 ZBTB3Q9H5J0 574 aa13.88□□□□□ -0.19
SNRNP200-208ENST00000497539 ANO2Q9NQ90 1003 aa13.88□□□□□ -0.19
SNRNP200-208ENST00000497539 BCL9LQ86UU0 1499 aa13.88□□□□□ -0.19
SNRNP200-208ENST00000497539 CSF1RP07333 972 aa13.88□□□□□ -0.19
SNRNP200-208ENST00000497539 IL15P40933 162 aaPredicted RBP13.88□□□□□ -0.19
SNRNP200-208ENST00000497539 ZBTB38Q8NAP3 1195 aaPredicted RBP13.88□□□□□ -0.19
SNRNP200-208ENST00000497539 CWC22Q9HCG8 908 aaKnown RBP13.88□□□□□ -0.19
SNRNP200-208ENST00000497539 MED23Q9ULK4 1368 aa13.88□□□□□ -0.19
SNRNP200-208ENST00000497539 ARAP2Q8WZ64 1704 aa13.88□□□□□ -0.19
SNRNP200-208ENST00000497539 FOXD4L5Q5VV16 416 aaPredicted RBP13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 FOXD4L4Q8WXT5 416 aaPredicted RBP13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 TLR7Q9NYK1 1049 aaKnown RBP13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 NHSQ6T4R5 1651 aa13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 CCDC173Q0VFZ6 552 aa13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 TFCP2Q12800 502 aa13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 TAF3Q5VWG9 929 aa13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 KLHDC4Q8TBB5 520 aa13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 DBNLQ9UJU6 430 aaKnown RBP13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 KLHL40Q2TBA0 621 aa13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 MARCH10Q8NA82 808 aaPredicted RBP13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 SIL1Q9H173 461 aa13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 DIAPH3Q9NSV4 1193 aa13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 RBM27Q9P2N5 1060 aaKnown RBP13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 PALD1Q9ULE6 856 aa13.87□□□□□ -0.19
SNRNP200-208ENST00000497539 EYA2O00167 538 aa13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 RGL2O15211 777 aa13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 CUL4AQ13619 759 aa13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 VPS72Q15906 364 aa13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 AK7Q96M32 723 aa13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 ADAMTS2O95450 1211 aa13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 PRIM1P49642 420 aaKnown RBP13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 ZSCAN30Q86W11 494 aa13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 ZGPATQ8N5A5 531 aaKnown RBP13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 PALLDQ8WX93 1383 aa13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 ABCC12Q96J65 1359 aa13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 PPP1R9BQ96SB3 815 aa13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 CCDC8Q9H0W5 538 aaPredicted RBP13.86□□□□□ -0.19
SNRNP200-208ENST00000497539 MAP4K4O95819 1239 aaPredicted RBP13.85□□□□□ -0.19
SNRNP200-208ENST00000497539 TERF1P54274 439 aa13.85□□□□□ -0.19
SNRNP200-208ENST00000497539 HAUS7Q99871 368 aa13.85□□□□□ -0.19
SNRNP200-208ENST00000497539 PRPF40AO75400 957 aaKnown RBP13.85□□□□□ -0.19
SNRNP200-208ENST00000497539 CYP2E1P05181 493 aaPredicted RBP13.85□□□□□ -0.19
SNRNP200-208ENST00000497539 PTMSP20962 102 aa13.85□□□□□ -0.19
SNRNP200-208ENST00000497539 MSNP26038 577 aaKnown RBP13.85□□□□□ -0.19
SNRNP200-208ENST00000497539 NLRP10Q86W26 655 aa13.85□□□□□ -0.19
SNRNP200-208ENST00000497539 JARID2Q92833 1246 aaPredicted RBP13.85□□□□□ -0.19
SNRNP200-208ENST00000497539 RBSNQ9H1K0 784 aa13.85□□□□□ -0.19
SNRNP200-208ENST00000497539 SCN7AQ01118 1682 aa13.84□□□□□ -0.19
SNRNP200-208ENST00000497539 SPATA31A6Q5VVP1 1343 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms