RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 TRMT112Q9UI30 125 aaKnown RBP12.29□□□□□ -0.44
TCTN3-206ENST00000497399 PNMA6EA0A0J9YXQ4 647 aa12.28□□□□□ -0.44
TCTN3-206ENST00000497399 FAM177BA6PVY3 158 aa12.28□□□□□ -0.44
TCTN3-206ENST00000497399 HSPA6P17066 643 aa12.28□□□□□ -0.44
TCTN3-206ENST00000497399 TM4SF1P30408 202 aa12.28□□□□□ -0.44
TCTN3-206ENST00000497399 FOXO4P98177 505 aa12.28□□□□□ -0.44
TCTN3-206ENST00000497399 MTX1Q13505 466 aa12.28□□□□□ -0.44
TCTN3-206ENST00000497399 RABL6Q3YEC7 729 aaPredicted RBP12.28□□□□□ -0.44
TCTN3-206ENST00000497399 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
TCTN3-206ENST00000497399 HDAC5Q9UQL6 1122 aa12.28□□□□□ -0.44
TCTN3-206ENST00000497399 WDR90Q96KV7 1748 aa12.28□□□□□ -0.44
TCTN3-206ENST00000497399 DDR1Q08345 913 aa12.27□□□□□ -0.45
TCTN3-206ENST00000497399 PPP1R42Q7Z4L9 355 aa12.27□□□□□ -0.45
TCTN3-206ENST00000497399 SSH3Q8TE77 659 aa12.27□□□□□ -0.45
TCTN3-206ENST00000497399 SETDB2Q96T68 719 aa12.27□□□□□ -0.45
TCTN3-206ENST00000497399 PLA2G12BQ9BX93 195 aa12.27□□□□□ -0.45
TCTN3-206ENST00000497399 RWDD1Q9H446 243 aaPredicted RBP12.27□□□□□ -0.45
TCTN3-206ENST00000497399 SH3TC1Q8TE82 1336 aa12.27□□□□□ -0.45
TCTN3-206ENST00000497399 DICER1Q9UPY3 1922 aaKnown RBP12.27□□□□□ -0.45
TCTN3-206ENST00000497399 IRS4O14654 1257 aaPredicted RBP12.26□□□□□ -0.45
TCTN3-206ENST00000497399 POLA2Q14181 598 aa12.26□□□□□ -0.45
TCTN3-206ENST00000497399 IFFO2Q5TF58 517 aa12.26□□□□□ -0.45
TCTN3-206ENST00000497399 NUTM1Q86Y26 1132 aa12.26□□□□□ -0.45
TCTN3-206ENST00000497399 DNAJC5GQ8N7S2 189 aa12.26□□□□□ -0.45
TCTN3-206ENST00000497399 CARMIL3Q8ND23 1372 aa12.26□□□□□ -0.45
TCTN3-206ENST00000497399 TNRC6CQ9HCJ0 1690 aaKnown RBP12.26□□□□□ -0.45
TCTN3-206ENST00000497399 CSF1RP07333 972 aa12.25□□□□□ -0.45
TCTN3-206ENST00000497399 ERFEQ4G0M1 354 aa12.25□□□□□ -0.45
TCTN3-206ENST00000497399 LMBR1LQ6UX01 489 aa12.25□□□□□ -0.45
TCTN3-206ENST00000497399 CENPQQ7L2Z9 268 aaPredicted RBP12.25□□□□□ -0.45
TCTN3-206ENST00000497399 SMC5Q8IY18 1101 aa12.25□□□□□ -0.45
TCTN3-206ENST00000497399 DCTPP1Q9H773 170 aa12.25□□□□□ -0.45
TCTN3-206ENST00000497399 ABCC12Q96J65 1359 aa12.25□□□□□ -0.45
TCTN3-206ENST00000497399 POLRMTO00411 1230 aaKnown RBP12.24□□□□□ -0.45
TCTN3-206ENST00000497399 SRGAP3O43295 1099 aa12.24□□□□□ -0.45
TCTN3-206ENST00000497399 PDE8AO60658 829 aa12.24□□□□□ -0.45
TCTN3-206ENST00000497399 HMMRO75330 724 aa12.24□□□□□ -0.45
TCTN3-206ENST00000497399 HCLS1P14317 486 aaPredicted RBP12.24□□□□□ -0.45
TCTN3-206ENST00000497399 RFX5P48382 616 aaPredicted RBP12.24□□□□□ -0.45
TCTN3-206ENST00000497399 PRELPP51888 382 aa12.24□□□□□ -0.45
TCTN3-206ENST00000497399 CACNA1SQ13698 1873 aa12.24□□□□□ -0.45
TCTN3-206ENST00000497399 FER1L6Q2WGJ9 1857 aa12.24□□□□□ -0.45
TCTN3-206ENST00000497399 SLC10A5Q5PT55 438 aa12.24□□□□□ -0.45
TCTN3-206ENST00000497399 NBPF5PQ86XG9 351 aaPredicted RBP12.24□□□□□ -0.45
TCTN3-206ENST00000497399 NYXQ9GZU5 481 aa12.24□□□□□ -0.45
TCTN3-206ENST00000497399 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
TCTN3-206ENST00000497399 COL11A2P13942 1736 aaPredicted RBP12.23□□□□□ -0.45
TCTN3-206ENST00000497399 SERPINB2P05120 415 aa12.23□□□□□ -0.45
TCTN3-206ENST00000497399 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
TCTN3-206ENST00000497399 TPTE2Q6XPS3 522 aa12.23□□□□□ -0.45
TCTN3-206ENST00000497399 TTLL11Q8NHH1 800 aa12.23□□□□□ -0.45
TCTN3-206ENST00000497399 NMRK2Q9NPI5 230 aa12.23□□□□□ -0.45
TCTN3-206ENST00000497399 TAF1P21675 1872 aa12.23□□□□□ -0.45
TCTN3-206ENST00000497399 RIC1Q4ADV7 1423 aa12.22□□□□□ -0.45
TCTN3-206ENST00000497399 CTSWP56202 376 aa12.22□□□□□ -0.45
TCTN3-206ENST00000497399 C3orf67Q6ZVT6 689 aa12.22□□□□□ -0.45
TCTN3-206ENST00000497399 CCDC24Q8N4L8 307 aa12.22□□□□□ -0.45
TCTN3-206ENST00000497399 PARP3Q9Y6F1 533 aa12.22□□□□□ -0.45
TCTN3-206ENST00000497399 TIAM2Q8IVF5 1701 aa12.22□□□□□ -0.45
TCTN3-206ENST00000497399 COL4A1P02462 1669 aa12.22□□□□□ -0.45
TCTN3-206ENST00000497399 SPEF2Q9C093 1822 aa12.21□□□□□ -0.45
TCTN3-206ENST00000497399 CHRNA5P30532 468 aa12.21□□□□□ -0.45
TCTN3-206ENST00000497399 FAM161AQ3B820 660 aa12.21□□□□□ -0.45
TCTN3-206ENST00000497399 ARHGAP27Q6ZUM4 889 aa12.21□□□□□ -0.45
TCTN3-206ENST00000497399 KLHDC4Q8TBB5 520 aa12.21□□□□□ -0.45
TCTN3-206ENST00000497399 GCC1Q96CN9 775 aa12.21□□□□□ -0.45
TCTN3-206ENST00000497399 CCDC85AQ96PX6 553 aaPredicted RBP12.21□□□□□ -0.45
TCTN3-206ENST00000497399 COPRSQ9NQ92 184 aa12.21□□□□□ -0.45
TCTN3-206ENST00000497399 PA2G4Q9UQ80 394 aaKnown RBP12.21□□□□□ -0.45
TCTN3-206ENST00000497399 EXOC6BQ9Y2D4 811 aa12.21□□□□□ -0.45
TCTN3-206ENST00000497399 NOP58Q9Y2X3 529 aaKnown RBP12.21□□□□□ -0.45
TCTN3-206ENST00000497399 TOMM70O94826 608 aa12.2□□□□□ -0.46
TCTN3-206ENST00000497399 GTF2E1P29083 439 aaPredicted RBP12.2□□□□□ -0.46
TCTN3-206ENST00000497399 PTPN12Q05209 780 aaKnown RBP12.2□□□□□ -0.46
TCTN3-206ENST00000497399 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
TCTN3-206ENST00000497399 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
TCTN3-206ENST00000497399 GREM2Q9H772 168 aa12.2□□□□□ -0.46
TCTN3-206ENST00000497399 PDZRN3Q9UPQ7 1066 aa12.2□□□□□ -0.46
TCTN3-206ENST00000497399 CHMP3Q9Y3E7 222 aa12.2□□□□□ -0.46
TCTN3-206ENST00000497399 RTL9Q8NET4 1388 aa12.19□□□□□ -0.46
TCTN3-206ENST00000497399 SURF6O75683 361 aaKnown RBP12.19□□□□□ -0.46
TCTN3-206ENST00000497399 HSP90B1P14625 803 aaKnown RBP12.19□□□□□ -0.46
TCTN3-206ENST00000497399 C9orf131Q5VYM1 1079 aa12.19□□□□□ -0.46
TCTN3-206ENST00000497399 SKAP1Q86WV1 359 aa12.19□□□□□ -0.46
TCTN3-206ENST00000497399 ZNF594Q96JF6 807 aaPredicted RBP12.19□□□□□ -0.46
TCTN3-206ENST00000497399 PIM2Q9P1W9 311 aa12.19□□□□□ -0.46
TCTN3-206ENST00000497399 SLX4Q8IY92 1834 aa12.18□□□□□ -0.46
TCTN3-206ENST00000497399 ITGA6P23229 1130 aa12.18□□□□□ -0.46
TCTN3-206ENST00000497399 NUCB1Q02818 461 aa12.18□□□□□ -0.46
TCTN3-206ENST00000497399 NLRP3Q96P20 1036 aa12.18□□□□□ -0.46
TCTN3-206ENST00000497399 SEC31BQ9NQW1 1179 aa12.18□□□□□ -0.46
TCTN3-206ENST00000497399 A0A1B0GUL6 1792 aa12.18□□□□□ -0.46
TCTN3-206ENST00000497399 SASH1O94885 1247 aa12.17□□□□□ -0.46
TCTN3-206ENST00000497399 ST5P78524 1137 aa12.17□□□□□ -0.46
TCTN3-206ENST00000497399 IFIT5Q13325 482 aaKnown RBP12.17□□□□□ -0.46
TCTN3-206ENST00000497399 CCDC57Q2TAC2 916 aa12.17□□□□□ -0.46
TCTN3-206ENST00000497399 CCDC152Q4G0S7 254 aa12.17□□□□□ -0.46
TCTN3-206ENST00000497399 ANKRD45Q5TZF3 282 aa12.17□□□□□ -0.46
TCTN3-206ENST00000497399 ATG9AQ7Z3C6 839 aa12.17□□□□□ -0.46
TCTN3-206ENST00000497399 PUS3Q9BZE2 481 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms