RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 KAZALD1Q96I82 304 aa13.03□□□□□ -0.32
USP13-205ENST00000497380 BRIP1Q9BX63 1249 aa13.03□□□□□ -0.32
USP13-205ENST00000497380 PDGFDQ9GZP0 370 aaPredicted RBP13.03□□□□□ -0.32
USP13-205ENST00000497380 CHMP3Q9Y3E7 222 aa13.03□□□□□ -0.32
USP13-205ENST00000497380 ZBTB7AO95365 584 aa13.02□□□□□ -0.33
USP13-205ENST00000497380 C1QTNF8P60827 252 aa13.02□□□□□ -0.33
USP13-205ENST00000497380 HSP90AB4PQ58FF6 505 aa13.02□□□□□ -0.33
USP13-205ENST00000497380 SYNE4Q8N205 404 aa13.02□□□□□ -0.33
USP13-205ENST00000497380 SSH3Q8TE77 659 aa13.02□□□□□ -0.33
USP13-205ENST00000497380 UTRNP46939 3433 aa13.01□□□□□ -0.33
USP13-205ENST00000497380 ANKRD18BA2A2Z9 1011 aa13.01□□□□□ -0.33
USP13-205ENST00000497380 TAF7LQ5H9L4 462 aa13.01□□□□□ -0.33
USP13-205ENST00000497380 EPHA10Q5JZY3 1008 aa13.01□□□□□ -0.33
USP13-205ENST00000497380 GCC1Q96CN9 775 aa13.01□□□□□ -0.33
USP13-205ENST00000497380 CDC5LQ99459 802 aaKnown RBP13.01□□□□□ -0.33
USP13-205ENST00000497380 FBXO3Q9UK99 471 aa13.01□□□□□ -0.33
USP13-205ENST00000497380 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
USP13-205ENST00000497380 CASZ1Q86V15 1759 aa13□□□□□ -0.33
USP13-205ENST00000497380 RTL9Q8NET4 1388 aa13□□□□□ -0.33
USP13-205ENST00000497380 PNMA6EA0A0J9YXQ4 647 aa13□□□□□ -0.33
USP13-205ENST00000497380 POLA2Q14181 598 aa13□□□□□ -0.33
USP13-205ENST00000497380 DDX46Q7L014 1031 aaKnown RBP13□□□□□ -0.33
USP13-205ENST00000497380 CENPQQ7L2Z9 268 aaPredicted RBP13□□□□□ -0.33
USP13-205ENST00000497380 PIAS4Q8N2W9 510 aaPredicted RBP13□□□□□ -0.33
USP13-205ENST00000497380 RPGRQ92834 1020 aaKnown RBP13□□□□□ -0.33
USP13-205ENST00000497380 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
USP13-205ENST00000497380 NRXN2Q9P2S2 1712 aa12.99□□□□□ -0.33
USP13-205ENST00000497380 ABCC12Q96J65 1359 aa12.99□□□□□ -0.33
USP13-205ENST00000497380 KLRG2A4D1S0 409 aaPredicted RBP12.99□□□□□ -0.33
USP13-205ENST00000497380 RAB11FIP3O75154 756 aa12.99□□□□□ -0.33
USP13-205ENST00000497380 ITGA6P23229 1130 aa12.99□□□□□ -0.33
USP13-205ENST00000497380 G3BP1Q13283 466 aaKnown RBP eCLIP12.99□□□□□ -0.33
USP13-205ENST00000497380 ERC1Q8IUD2 1116 aa12.99□□□□□ -0.33
USP13-205ENST00000497380 SIRT2Q8IXJ6 389 aa12.99□□□□□ -0.33
USP13-205ENST00000497380 RBM17Q96I25 401 aaKnown RBP12.99□□□□□ -0.33
USP13-205ENST00000497380 COPRSQ9NQ92 184 aa12.99□□□□□ -0.33
USP13-205ENST00000497380 LAMB2P55268 1798 aa12.99□□□□□ -0.33
USP13-205ENST00000497380 MYH3P11055 1940 aa12.98□□□□□ -0.33
USP13-205ENST00000497380 H0YIN7 160 aa12.98□□□□□ -0.33
USP13-205ENST00000497380 SURF6O75683 361 aaKnown RBP12.98□□□□□ -0.33
USP13-205ENST00000497380 NPR1P16066 1061 aa12.98□□□□□ -0.33
USP13-205ENST00000497380 ALDH1B1P30837 517 aa12.98□□□□□ -0.33
USP13-205ENST00000497380 IGHMBP2P38935 993 aaKnown RBP12.98□□□□□ -0.33
USP13-205ENST00000497380 CRY2Q49AN0 593 aa12.98□□□□□ -0.33
USP13-205ENST00000497380 CCDC24Q8N4L8 307 aa12.98□□□□□ -0.33
USP13-205ENST00000497380 GREM2Q9H772 168 aa12.98□□□□□ -0.33
USP13-205ENST00000497380 DCTPP1Q9H773 170 aa12.98□□□□□ -0.33
USP13-205ENST00000497380 CEP350Q5VT06 3117 aa12.97□□□□□ -0.33
USP13-205ENST00000497380 OS9Q13438 667 aaPredicted RBP12.97□□□□□ -0.33
USP13-205ENST00000497380 FAM161AQ3B820 660 aa12.97□□□□□ -0.33
USP13-205ENST00000497380 B4GALNT3Q6L9W6 998 aa12.97□□□□□ -0.33
USP13-205ENST00000497380 ANKRD18AQ8IVF6 992 aa12.97□□□□□ -0.33
USP13-205ENST00000497380 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
USP13-205ENST00000497380 MPHOSPH8Q99549 860 aa12.97□□□□□ -0.33
USP13-205ENST00000497380 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
USP13-205ENST00000497380 DDX60Q8IY21 1712 aaKnown RBP12.96□□□□□ -0.33
USP13-205ENST00000497380 BBOX1O75936 387 aa12.96□□□□□ -0.33
USP13-205ENST00000497380 CIAO1O76071 339 aa12.96□□□□□ -0.33
USP13-205ENST00000497380 IGHDP01880 384 aa12.96□□□□□ -0.33
USP13-205ENST00000497380 HOXA10P31260 410 aaPredicted RBP12.96□□□□□ -0.33
USP13-205ENST00000497380 IL15P40933 162 aaPredicted RBP12.96□□□□□ -0.33
USP13-205ENST00000497380 RFX5P48382 616 aaPredicted RBP12.96□□□□□ -0.33
USP13-205ENST00000497380 TGFB2P61812 414 aa12.96□□□□□ -0.33
USP13-205ENST00000497380 RPS8P62241 208 aaKnown RBP12.96□□□□□ -0.33
USP13-205ENST00000497380 PTPN12Q05209 780 aaKnown RBP12.96□□□□□ -0.33
USP13-205ENST00000497380 LDHAL6AQ6ZMR3 332 aa12.96□□□□□ -0.33
USP13-205ENST00000497380 TMC4Q7Z404 712 aa12.96□□□□□ -0.33
USP13-205ENST00000497380 SMC5Q8IY18 1101 aa12.96□□□□□ -0.33
USP13-205ENST00000497380 MASTLQ96GX5 879 aa12.96□□□□□ -0.33
USP13-205ENST00000497380 CRAMP1Q96RY5 1269 aa12.96□□□□□ -0.33
USP13-205ENST00000497380 TMX4Q9H1E5 349 aaPredicted RBP12.96□□□□□ -0.33
USP13-205ENST00000497380 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
USP13-205ENST00000497380 EYA2O00167 538 aa12.95□□□□□ -0.34
USP13-205ENST00000497380 SRGNP10124 158 aa12.95□□□□□ -0.34
USP13-205ENST00000497380 GRAPQ13588 217 aa12.95□□□□□ -0.34
USP13-205ENST00000497380 STYK1Q6J9G0 422 aa12.95□□□□□ -0.34
USP13-205ENST00000497380 C2CD5Q86YS7 1000 aa12.95□□□□□ -0.34
USP13-205ENST00000497380 GRAPLQ8TC17 118 aaPredicted RBP12.95□□□□□ -0.34
USP13-205ENST00000497380 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
USP13-205ENST00000497380 CNNM1Q9NRU3 951 aa12.95□□□□□ -0.34
USP13-205ENST00000497380 PTGER2P43116 358 aa12.94□□□□□ -0.34
USP13-205ENST00000497380 C3orf67Q6ZVT6 689 aa12.94□□□□□ -0.34
USP13-205ENST00000497380 CNKSR1Q969H4 720 aa12.94□□□□□ -0.34
USP13-205ENST00000497380 KIF1BPQ96EK5 621 aa12.94□□□□□ -0.34
USP13-205ENST00000497380 LRRCC1Q9C099 1032 aa12.94□□□□□ -0.34
USP13-205ENST00000497380 SEC31BQ9NQW1 1179 aa12.94□□□□□ -0.34
USP13-205ENST00000497380 BSDC1Q9NW68 430 aaPredicted RBP12.94□□□□□ -0.34
USP13-205ENST00000497380 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
USP13-205ENST00000497380 C10orf71Q711Q0 1435 aa12.94□□□□□ -0.34
USP13-205ENST00000497380 ZNF622Q969S3 477 aaKnown RBP eCLIP12.93□□□□□ -0.34
USP13-205ENST00000497380 ZNF594Q96JF6 807 aaPredicted RBP12.93□□□□□ -0.34
USP13-205ENST00000497380 SIL1Q9H173 461 aa12.93□□□□□ -0.34
USP13-205ENST00000497380 CEP126Q9P2H0 1117 aa12.93□□□□□ -0.34
USP13-205ENST00000497380 PA2G4Q9UQ80 394 aaKnown RBP12.93□□□□□ -0.34
USP13-205ENST00000497380 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
USP13-205ENST00000497380 KDM2BQ8NHM5 1336 aa12.92□□□□□ -0.34
USP13-205ENST00000497380 ANKRD45Q5TZF3 282 aa12.92□□□□□ -0.34
USP13-205ENST00000497380 CLASRPQ8N2M8 674 aaKnown RBP12.92□□□□□ -0.34
USP13-205ENST00000497380 KLHDC4Q8TBB5 520 aa12.92□□□□□ -0.34
USP13-205ENST00000497380 RHPN1Q8TCX5 695 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms