RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	ZBTB3	Q9H5J0	574 aa		7.72	□□□□□ -1.17
UBE3C-208	ENST00000497368	MAP3K5	Q99683	1374 aa		7.71	□□□□□ -1.17
UBE3C-208	ENST00000497368	SIPA1L3	O60292	1781 aa	Predicted RBP	7.71	□□□□□ -1.17
UBE3C-208	ENST00000497368	UBR2	Q8IWV8	1755 aa		7.71	□□□□□ -1.17
UBE3C-208	ENST00000497368	KDM6A	O15550	1401 aa	Predicted RBP	7.71	□□□□□ -1.17
UBE3C-208	ENST00000497368	COL3A1	P02461	1466 aa	Predicted RBP	7.71	□□□□□ -1.18
UBE3C-208	ENST00000497368	SPDYE5	A6NIY4	337 aa		7.71	□□□□□ -1.18
UBE3C-208	ENST00000497368	CYP27B1	O15528	508 aa		7.71	□□□□□ -1.18
UBE3C-208	ENST00000497368	PRKCSH	P14314	528 aa	Predicted RBP	7.71	□□□□□ -1.18
UBE3C-208	ENST00000497368	FOXC1	Q12948	553 aa		7.71	□□□□□ -1.18
UBE3C-208	ENST00000497368	NBPF14	Q5TI25	921 aa		7.71	□□□□□ -1.18
UBE3C-208	ENST00000497368	NUDT12	Q9BQG2	462 aa		7.71	□□□□□ -1.18
UBE3C-208	ENST00000497368	RSPH6A	Q9H0K4	717 aa		7.71	□□□□□ -1.18
UBE3C-208	ENST00000497368	SPON1	Q9HCB6	807 aa		7.71	□□□□□ -1.18
UBE3C-208	ENST00000497368	KDR	P35968	1356 aa		7.71	□□□□□ -1.18
UBE3C-208	ENST00000497368	TNFRSF10A	O00220	468 aa		7.7	□□□□□ -1.18
UBE3C-208	ENST00000497368	PRPF38B	Q5VTL8	546 aa	Known RBP	7.7	□□□□□ -1.18
UBE3C-208	ENST00000497368	DDRGK1	Q96HY6	314 aa		7.7	□□□□□ -1.18
UBE3C-208	ENST00000497368	MRC1	P22897	1456 aa		7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	NRG2	O14511	850 aa	Predicted RBP	7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	GDF9	O60383	454 aa		7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	LILRB3	O75022	631 aa		7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	CD2BP2	O95400	341 aa	Known RBP	7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	HSPA5	P11021	654 aa	Known RBP	7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	AMPH	P49418	695 aa		7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	BRPF1	P55201	1214 aa	Predicted RBP	7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	TRIM32	Q13049	653 aa		7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	PTCRA	Q6ISU1	281 aa	Predicted RBP	7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368		Q6ZNB5	142 aa		7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	DDX54	Q8TDD1	881 aa	Known RBP	7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	PKD2L1	Q9P0L9	805 aa		7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	POLK	Q9UBT6	870 aa		7.69	□□□□□ -1.18
UBE3C-208	ENST00000497368	CCNYL3	P0C7X3	344 aa		7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	LAPTM4A	Q15012	233 aa		7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	PTPRN	Q16849	979 aa		7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	TUSC1	Q2TAM9	212 aa		7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	RTL5	Q5HYW3	569 aa	Predicted RBP	7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	ZCRB1	Q8TBF4	217 aa	Known RBP	7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	TSC1	Q92574	1164 aa		7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	STK32B	Q9NY57	414 aa		7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	TIMELESS	Q9UNS1	1208 aa		7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	WASHC2A	Q641Q2	1341 aa		7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	IGSF1	Q8N6C5	1336 aa		7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	PALLD	Q8WX93	1383 aa		7.68	□□□□□ -1.18
UBE3C-208	ENST00000497368	N4BP2	Q86UW6	1770 aa	Predicted RBP	7.67	□□□□□ -1.18
UBE3C-208	ENST00000497368	SH3D19	Q5HYK7	790 aa		7.67	□□□□□ -1.18
UBE3C-208	ENST00000497368	DESI1	Q6ICB0	168 aa		7.67	□□□□□ -1.18
UBE3C-208	ENST00000497368	PROCA1	Q8NCQ7	364 aa	Predicted RBP	7.67	□□□□□ -1.18
UBE3C-208	ENST00000497368	MTFR1L	Q9H019	292 aa		7.67	□□□□□ -1.18
UBE3C-208	ENST00000497368	PCDH11X	Q9BZA7	1347 aa		7.67	□□□□□ -1.18
UBE3C-208	ENST00000497368	PCDH11Y	Q9BZA8	1340 aa		7.67	□□□□□ -1.18
UBE3C-208	ENST00000497368	PRR20E	P86478	221 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	PRR20C	P86479	221 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	PRR20D	P86480	221 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	PRR20B	P86481	221 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	PRR20A	P86496	221 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	EIF4A2	Q14240	407 aa	Known RBP	7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	SKIV2L	Q15477	1246 aa	Known RBP	7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	SLC27A3	Q5K4L6	730 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	SMIM5	Q71RC9	77 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	IL27	Q8NEV9	243 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	SYT17	Q9BSW7	474 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	PCGF6	Q9BYE7	350 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	CGNL1	Q0VF96	1302 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	PLEKHG2	Q9H7P9	1386 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	KCP	Q6ZWJ8	1503 aa		7.66	□□□□□ -1.18
UBE3C-208	ENST00000497368	PER1	O15534	1290 aa	Predicted RBP	7.65	□□□□□ -1.18
UBE3C-208	ENST00000497368	KIF7	Q2M1P5	1343 aa		7.65	□□□□□ -1.18
UBE3C-208	ENST00000497368	LYPD8	Q6UX82	237 aa		7.65	□□□□□ -1.18
UBE3C-208	ENST00000497368	COL23A1	Q86Y22	540 aa	Predicted RBP	7.65	□□□□□ -1.18
UBE3C-208	ENST00000497368	NLGN2	Q8NFZ4	835 aa		7.65	□□□□□ -1.18
UBE3C-208	ENST00000497368	SLC4A9	Q96Q91	983 aa		7.65	□□□□□ -1.18
UBE3C-208	ENST00000497368	EVA1B	Q9NVM1	165 aa		7.65	□□□□□ -1.18
UBE3C-208	ENST00000497368	NRXN2	Q9P2S2	1712 aa		7.65	□□□□□ -1.18
UBE3C-208	ENST00000497368	DLEC1	Q9Y238	1755 aa		7.65	□□□□□ -1.18
UBE3C-208	ENST00000497368	AFDN	P55196	1824 aa	Known RBP	7.64	□□□□□ -1.19
UBE3C-208	ENST00000497368	SCN7A	Q01118	1682 aa		7.64	□□□□□ -1.19
UBE3C-208	ENST00000497368	LCE2B	O14633	110 aa		7.64	□□□□□ -1.19
UBE3C-208	ENST00000497368	TAT	P17735	454 aa	Predicted RBP	7.64	□□□□□ -1.19
UBE3C-208	ENST00000497368	SKOR1	P84550	965 aa		7.64	□□□□□ -1.19
UBE3C-208	ENST00000497368	KCNH2	Q12809	1159 aa		7.64	□□□□□ -1.19
UBE3C-208	ENST00000497368	ITPK1	Q13572	414 aa		7.64	□□□□□ -1.19
UBE3C-208	ENST00000497368	CDCA8	Q53HL2	280 aa		7.64	□□□□□ -1.19
UBE3C-208	ENST00000497368	AEBP1	Q8IUX7	1158 aa		7.64	□□□□□ -1.19
UBE3C-208	ENST00000497368	PIGB	Q92521	554 aa		7.64	□□□□□ -1.19
UBE3C-208	ENST00000497368	CCNL1	Q9UK58	526 aa	Predicted RBP	7.64	□□□□□ -1.19
UBE3C-208	ENST00000497368	PHKG2	P15735	406 aa		7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	CTH	P32929	405 aa		7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	LINC00116	Q8NCU8	138 aa		7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	RAPGEF4	Q8WZA2	1011 aa		7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	SYTL4	Q96C24	671 aa	Predicted RBP	7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	ARX	Q96QS3	562 aa		7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	UNC93B1	Q9H1C4	597 aa		7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	PANK3	Q9H999	370 aa		7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	MAP10	Q9P2G4	905 aa		7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	PPP1R1B	Q9UD71	204 aa	Predicted RBP	7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	ARFGEF1	Q9Y6D6	1849 aa		7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	BCOR	Q6W2J9	1755 aa		7.63	□□□□□ -1.19
UBE3C-208	ENST00000497368	COL11A2	P13942	1736 aa	Predicted RBP	7.63	□□□□□ -1.19

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