RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 HYPKQ9NX55 129 aa21.93■■□□□ 1.1
TRAPPC3-207ENST00000497251 ABT1Q9ULW3 272 aaKnown RBP21.93■■□□□ 1.1
TRAPPC3-207ENST00000497251 HCLS1P14317 486 aaPredicted RBP21.92■■□□□ 1.1
TRAPPC3-207ENST00000497251 CXCL9Q07325 125 aa21.92■■□□□ 1.1
TRAPPC3-207ENST00000497251 TRIM28Q13263 835 aaKnown RBP21.92■■□□□ 1.1
TRAPPC3-207ENST00000497251 HDGFL1Q5TGJ6 251 aa21.92■■□□□ 1.1
TRAPPC3-207ENST00000497251 TRIM35Q9UPQ4 493 aa21.92■■□□□ 1.1
TRAPPC3-207ENST00000497251 WDR33Q9C0J8 1336 aaKnown RBP21.91■■□□□ 1.1
TRAPPC3-207ENST00000497251 NEUROD2Q15784 382 aa21.91■■□□□ 1.1
TRAPPC3-207ENST00000497251 CIAPIN1Q6FI81 312 aa21.91■■□□□ 1.1
TRAPPC3-207ENST00000497251 PGAP2Q9UHJ9 254 aa21.91■■□□□ 1.1
TRAPPC3-207ENST00000497251 ANKRD36CQ5JPF3 1778 aa21.91■■□□□ 1.1
TRAPPC3-207ENST00000497251 CALD1Q05682 793 aaKnown RBP21.9■■□□□ 1.1
TRAPPC3-207ENST00000497251 DDX10Q13206 875 aaKnown RBP21.9■■□□□ 1.1
TRAPPC3-207ENST00000497251 SF3B3Q15393 1217 aaKnown RBP21.9■■□□□ 1.1
TRAPPC3-207ENST00000497251 NECTIN2Q92692 538 aa21.9■■□□□ 1.1
TRAPPC3-207ENST00000497251 CHPF2Q9P2E5 772 aa21.9■■□□□ 1.1
TRAPPC3-207ENST00000497251 ISCA1Q9BUE6 129 aa21.89■■□□□ 1.09
TRAPPC3-207ENST00000497251 LAS1LQ9Y4W2 734 aaKnown RBP21.89■■□□□ 1.09
TRAPPC3-207ENST00000497251 CAPN15O75808 1086 aa21.88■■□□□ 1.09
TRAPPC3-207ENST00000497251 CCDC146Q8IYE0 955 aa21.88■■□□□ 1.09
TRAPPC3-207ENST00000497251 HHIPL1Q96JK4 782 aa21.88■■□□□ 1.09
TRAPPC3-207ENST00000497251 BEGAINQ9BUH8 593 aa21.87■■□□□ 1.09
TRAPPC3-207ENST00000497251 BCL2L13Q9BXK5 485 aa21.87■■□□□ 1.09
TRAPPC3-207ENST00000497251 ADAMTS8Q9UP79 889 aa21.87■■□□□ 1.09
TRAPPC3-207ENST00000497251 LTBP1Q14766 1721 aa21.86■■□□□ 1.09
TRAPPC3-207ENST00000497251 MAP2K2P36507 400 aa21.86■■□□□ 1.09
TRAPPC3-207ENST00000497251 GMPSP49915 693 aaPredicted RBP21.86■■□□□ 1.09
TRAPPC3-207ENST00000497251 DPF2Q92785 391 aa21.86■■□□□ 1.09
TRAPPC3-207ENST00000497251 TLL2Q9Y6L7 1015 aa21.86■■□□□ 1.09
TRAPPC3-207ENST00000497251 H7C1D1 291 aa21.85■■□□□ 1.09
TRAPPC3-207ENST00000497251 KRT24Q2M2I5 525 aa21.85■■□□□ 1.09
TRAPPC3-207ENST00000497251 DUSP27Q5VZP5 1158 aa21.85■■□□□ 1.09
TRAPPC3-207ENST00000497251 CST9Q5W186 159 aa21.85■■□□□ 1.09
TRAPPC3-207ENST00000497251 CAPNS2Q96L46 248 aa21.85■■□□□ 1.09
TRAPPC3-207ENST00000497251 WASHC4Q2M389 1173 aa21.84■■□□□ 1.09
TRAPPC3-207ENST00000497251 CDC37L1Q7L3B6 337 aa21.84■■□□□ 1.09
TRAPPC3-207ENST00000497251 GPR101Q96P66 508 aaPredicted RBP21.84■■□□□ 1.09
TRAPPC3-207ENST00000497251 EYA3Q99504 573 aa21.84■■□□□ 1.09
TRAPPC3-207ENST00000497251 TRPM7Q96QT4 1865 aa21.83■■□□□ 1.09
TRAPPC3-207ENST00000497251 ZNF853P0CG23 659 aa21.83■■□□□ 1.09
TRAPPC3-207ENST00000497251 RPS12P25398 132 aaKnown RBP21.83■■□□□ 1.09
TRAPPC3-207ENST00000497251 LBX1P52954 281 aa21.83■■□□□ 1.09
TRAPPC3-207ENST00000497251 GNAI1P63096 354 aa21.83■■□□□ 1.09
TRAPPC3-207ENST00000497251 FAM89AQ96GI7 184 aa21.83■■□□□ 1.09
TRAPPC3-207ENST00000497251 IFT57Q9NWB7 429 aa21.83■■□□□ 1.09
TRAPPC3-207ENST00000497251 CNOT7Q9UIV1 285 aaKnown RBP21.83■■□□□ 1.09
TRAPPC3-207ENST00000497251 CA12O43570 354 aa21.82■■□□□ 1.08
TRAPPC3-207ENST00000497251 RAD17O75943 681 aa21.82■■□□□ 1.08
TRAPPC3-207ENST00000497251 GOLGA2Q08379 1002 aa21.82■■□□□ 1.08
TRAPPC3-207ENST00000497251 LAMB2P55268 1798 aa21.82■■□□□ 1.08
TRAPPC3-207ENST00000497251 HSPA8P11142 646 aaKnown RBP21.81■■□□□ 1.08
TRAPPC3-207ENST00000497251 RPS8P62241 208 aaKnown RBP21.81■■□□□ 1.08
TRAPPC3-207ENST00000497251 SAPCD2Q86UD0 394 aa21.81■■□□□ 1.08
TRAPPC3-207ENST00000497251 SLC51AQ86UW1 340 aa21.81■■□□□ 1.08
TRAPPC3-207ENST00000497251 ZBTB38Q8NAP3 1195 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC3-207ENST00000497251 PRKRIP1Q9H875 184 aaPredicted RBP21.81■■□□□ 1.08
TRAPPC3-207ENST00000497251 MBIPQ9NS73 344 aa21.81■■□□□ 1.08
TRAPPC3-207ENST00000497251 NSFL1CQ9UNZ2 370 aaKnown RBP21.81■■□□□ 1.08
TRAPPC3-207ENST00000497251 ATP5J2-PTCD1G3V325 749 aa21.8■■□□□ 1.08
TRAPPC3-207ENST00000497251 TRAF5O00463 557 aa21.8■■□□□ 1.08
TRAPPC3-207ENST00000497251 IRS4O14654 1257 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC3-207ENST00000497251 PAXIP1Q6ZW49 1069 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC3-207ENST00000497251 RIC3Q7Z5B4 369 aa21.8■■□□□ 1.08
TRAPPC3-207ENST00000497251 CCDC191Q8NCU4 936 aa21.8■■□□□ 1.08
TRAPPC3-207ENST00000497251 YDJCA8MPS7 323 aa21.79■■□□□ 1.08
TRAPPC3-207ENST00000497251 CELF2O95319 508 aaKnown RBP21.79■■□□□ 1.08
TRAPPC3-207ENST00000497251 CELF1Q92879 486 aaKnown RBP21.79■■□□□ 1.08
TRAPPC3-207ENST00000497251 LRRC37AA6NMS7 1700 aa21.78■■□□□ 1.08
TRAPPC3-207ENST00000497251 DDX58O95786 925 aaKnown RBP21.78■■□□□ 1.08
TRAPPC3-207ENST00000497251 ZEB1P37275 1124 aaPredicted RBP21.78■■□□□ 1.08
TRAPPC3-207ENST00000497251 PODXL2Q9NZ53 605 aa21.78■■□□□ 1.08
TRAPPC3-207ENST00000497251 C6orf229H3BNL8 230 aa21.77■■□□□ 1.08
TRAPPC3-207ENST00000497251 HIRAP54198 1017 aaPredicted RBP21.77■■□□□ 1.08
TRAPPC3-207ENST00000497251 CYP4F22Q6NT55 531 aa21.77■■□□□ 1.08
TRAPPC3-207ENST00000497251 MICALL2Q8IY33 904 aa21.77■■□□□ 1.08
TRAPPC3-207ENST00000497251 THSD7BQ9C0I4 1608 aa21.77■■□□□ 1.07
TRAPPC3-207ENST00000497251 FMR1Q06787 632 aaKnown RBP eCLIP21.76■■□□□ 1.07
TRAPPC3-207ENST00000497251 CCDC152Q4G0S7 254 aa21.76■■□□□ 1.07
TRAPPC3-207ENST00000497251 GLIS2Q9BZE0 524 aaPredicted RBP21.76■■□□□ 1.07
TRAPPC3-207ENST00000497251 ZC3H12CQ9C0D7 883 aaKnown RBP21.76■■□□□ 1.07
TRAPPC3-207ENST00000497251 POLLQ9UGP5 575 aa21.76■■□□□ 1.07
TRAPPC3-207ENST00000497251 PSMD14O00487 310 aa21.75■■□□□ 1.07
TRAPPC3-207ENST00000497251 APAF1O14727 1248 aa21.75■■□□□ 1.07
TRAPPC3-207ENST00000497251 PCCAP05165 728 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC3-207ENST00000497251 BRPF1P55201 1214 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC3-207ENST00000497251 CCDC30Q5VVM6 783 aa21.75■■□□□ 1.07
TRAPPC3-207ENST00000497251 DUOX1Q9NRD9 1551 aa21.74■■□□□ 1.07
TRAPPC3-207ENST00000497251 PDE8AO60658 829 aa21.74■■□□□ 1.07
TRAPPC3-207ENST00000497251 GPSM2P81274 684 aa21.74■■□□□ 1.07
TRAPPC3-207ENST00000497251 TBC1D16Q8TBP0 767 aa21.74■■□□□ 1.07
TRAPPC3-207ENST00000497251 TRPM4Q8TD43 1214 aa21.74■■□□□ 1.07
TRAPPC3-207ENST00000497251 DDX60Q8IY21 1712 aaKnown RBP21.74■■□□□ 1.07
TRAPPC3-207ENST00000497251 NOGQ13253 232 aa21.73■■□□□ 1.07
TRAPPC3-207ENST00000497251 DBNDD1Q9H9R9 158 aa21.73■■□□□ 1.07
TRAPPC3-207ENST00000497251 CWC25Q9NXE8 425 aaPredicted RBP21.73■■□□□ 1.07
TRAPPC3-207ENST00000497251 ECE2O60344 883 aa21.72■■□□□ 1.07
TRAPPC3-207ENST00000497251 VIL1P09327 827 aaKnown RBP21.72■■□□□ 1.07
TRAPPC3-207ENST00000497251 DCPSQ96C86 337 aaKnown RBP21.72■■□□□ 1.07
TRAPPC3-207ENST00000497251 METTL22Q9BUU2 404 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms