RNA–Protein interactions for RNA: ENST00000497091.1

PBX3-211, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 425 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-211ENST00000497091 TTLL11Q8NHH1 800 aa24.07■■□□□ 1.44
PBX3-211ENST00000497091 GRAPLQ8TC17 118 aaPredicted RBP24.07■■□□□ 1.44
PBX3-211ENST00000497091 CCDC85AQ96PX6 553 aaPredicted RBP24.07■■□□□ 1.44
PBX3-211ENST00000497091 TNRC6CQ9HCJ0 1690 aaKnown RBP24.07■■□□□ 1.44
PBX3-211ENST00000497091 CCDC93Q567U6 631 aa24.06■■□□□ 1.44
PBX3-211ENST00000497091 ZKSCAN2Q63HK3 967 aa24.06■■□□□ 1.44
PBX3-211ENST00000497091 COL11A2P13942 1736 aaPredicted RBP24.06■■□□□ 1.44
PBX3-211ENST00000497091 C1QTNF8P60827 252 aa24.05■■□□□ 1.44
PBX3-211ENST00000497091 RTKN2Q8IZC4 609 aa24.05■■□□□ 1.44
PBX3-211ENST00000497091 BRCA1P38398 1863 aaKnown RBP24.04■■□□□ 1.44
PBX3-211ENST00000497091 TRIM27P14373 513 aa24.04■■□□□ 1.44
PBX3-211ENST00000497091 RPS8P62241 208 aaKnown RBP24.04■■□□□ 1.44
PBX3-211ENST00000497091 OLFM4Q6UX06 510 aa24.04■■□□□ 1.44
PBX3-211ENST00000497091 SP8Q8IXZ3 490 aa24.04■■□□□ 1.44
PBX3-211ENST00000497091 SEC31BQ9NQW1 1179 aa24.04■■□□□ 1.44
PBX3-211ENST00000497091 RCAN3Q9UKA8 241 aa24.04■■□□□ 1.44
PBX3-211ENST00000497091 ATP6V0A2Q9Y487 856 aa24.04■■□□□ 1.44
PBX3-211ENST00000497091 DLEC1Q9Y238 1755 aa24.03■■□□□ 1.44
PBX3-211ENST00000497091 CSF1RP07333 972 aa24.03■■□□□ 1.44
PBX3-211ENST00000497091 NBPF7P0C2Y1 421 aaPredicted RBP24.03■■□□□ 1.44
PBX3-211ENST00000497091 GRIPAP1Q4V328 841 aa24.03■■□□□ 1.44
PBX3-211ENST00000497091 TMC4Q7Z404 712 aa24.03■■□□□ 1.44
PBX3-211ENST00000497091 CELF1Q92879 486 aaKnown RBP24.03■■□□□ 1.44
PBX3-211ENST00000497091 USP44Q9H0E7 712 aa24.03■■□□□ 1.44
PBX3-211ENST00000497091 UTYO14607 1347 aa24.03■■□□□ 1.44
PBX3-211ENST00000497091 NFKBIEO00221 500 aa24.02■■□□□ 1.44
PBX3-211ENST00000497091 FOXO4P98177 505 aa24.02■■□□□ 1.44
PBX3-211ENST00000497091 INTS3Q68E01 1043 aaKnown RBP24.02■■□□□ 1.44
PBX3-211ENST00000497091 CLUAP1Q96AJ1 413 aa24.02■■□□□ 1.44
PBX3-211ENST00000497091 SLX4Q8IY92 1834 aa24.01■■□□□ 1.43
PBX3-211ENST00000497091 RASSF7Q02833 373 aa24.01■■□□□ 1.43
PBX3-211ENST00000497091 TAOK3Q9H2K8 898 aa24.01■■□□□ 1.43
PBX3-211ENST00000497091 GREM2Q9H772 168 aa24.01■■□□□ 1.43
PBX3-211ENST00000497091 LMNB1P20700 586 aa24■■□□□ 1.43
PBX3-211ENST00000497091 C9orf131Q5VYM1 1079 aa24■■□□□ 1.43
PBX3-211ENST00000497091 CDC5LQ99459 802 aaKnown RBP24■■□□□ 1.43
PBX3-211ENST00000497091 TNNQ9UQP3 1299 aa24■■□□□ 1.43
PBX3-211ENST00000497091 FKBP4Q02790 459 aaKnown RBP eCLIP23.99■■□□□ 1.43
PBX3-211ENST00000497091 EPHA10Q5JZY3 1008 aa23.99■■□□□ 1.43
PBX3-211ENST00000497091 LMBR1LQ6UX01 489 aa23.99■■□□□ 1.43
PBX3-211ENST00000497091 ANKRD18AQ8IVF6 992 aa23.99■■□□□ 1.43
PBX3-211ENST00000497091 SUCLG2Q96I99 432 aa23.99■■□□□ 1.43
PBX3-211ENST00000497091 CHMP3Q9Y3E7 222 aa23.99■■□□□ 1.43
PBX3-211ENST00000497091 DDX60Q8IY21 1712 aaKnown RBP23.98■■□□□ 1.43
PBX3-211ENST00000497091 RNF181Q9P0P0 153 aa23.98■■□□□ 1.43
PBX3-211ENST00000497091 LTBP3Q9NS15 1303 aa23.98■■□□□ 1.43
PBX3-211ENST00000497091 ARFGEF1Q9Y6D6 1849 aa23.98■■□□□ 1.43
PBX3-211ENST00000497091 ITGA6P23229 1130 aa23.97■■□□□ 1.43
PBX3-211ENST00000497091 FTSJ3Q8IY81 847 aaKnown RBP23.97■■□□□ 1.43
PBX3-211ENST00000497091 DZIP1LQ8IYY4 767 aaKnown RBP23.97■■□□□ 1.43
PBX3-211ENST00000497091 MPNDQ8N594 471 aa23.97■■□□□ 1.43
PBX3-211ENST00000497091 RTL9Q8NET4 1388 aa23.97■■□□□ 1.43
PBX3-211ENST00000497091 HDAC5Q9UQL6 1122 aa23.97■■□□□ 1.43
PBX3-211ENST00000497091 ANKRD18BA2A2Z9 1011 aa23.96■■□□□ 1.43
PBX3-211ENST00000497091 UBTFL1P0CB47 393 aaPredicted RBP23.96■■□□□ 1.43
PBX3-211ENST00000497091 IFIT5Q13325 482 aaKnown RBP23.96■■□□□ 1.43
PBX3-211ENST00000497091 FAM161AQ3B820 660 aa23.96■■□□□ 1.43
PBX3-211ENST00000497091 KAZALD1Q96I82 304 aa23.96■■□□□ 1.43
PBX3-211ENST00000497091 PSMD1Q99460 953 aa23.96■■□□□ 1.43
PBX3-211ENST00000497091 IGHMBP2P38935 993 aaKnown RBP23.95■■□□□ 1.42
PBX3-211ENST00000497091 PRELPP51888 382 aa23.95■■□□□ 1.42
PBX3-211ENST00000497091 CCDC57Q2TAC2 916 aa23.95■■□□□ 1.42
PBX3-211ENST00000497091 DPP8Q6V1X1 898 aaPredicted RBP23.95■■□□□ 1.42
PBX3-211ENST00000497091 SLC51AQ86UW1 340 aa23.95■■□□□ 1.42
PBX3-211ENST00000497091 MS4A1P11836 297 aa23.94■■□□□ 1.42
PBX3-211ENST00000497091 TMEM57Q8N5G2 664 aa23.94■■□□□ 1.42
PBX3-211ENST00000497091 BICC1Q9H694 974 aaKnown RBP23.94■■□□□ 1.42
PBX3-211ENST00000497091 ZNF277Q9NRM2 450 aaPredicted RBP23.94■■□□□ 1.42
PBX3-211ENST00000497091 BSDC1Q9NW68 430 aaPredicted RBP23.94■■□□□ 1.42
PBX3-211ENST00000497091 NSFL1CQ9UNZ2 370 aaKnown RBP23.94■■□□□ 1.42
PBX3-211ENST00000497091 GNAI3P08754 354 aa23.93■■□□□ 1.42
PBX3-211ENST00000497091 SUPT20HQ8NEM7 779 aa23.93■■□□□ 1.42
PBX3-211ENST00000497091 MPHOSPH8Q99549 860 aa23.93■■□□□ 1.42
PBX3-211ENST00000497091 LAMB2P55268 1798 aa23.93■■□□□ 1.42
PBX3-211ENST00000497091 MEIS3Q99687 375 aa23.92■■□□□ 1.42
PBX3-211ENST00000497091 RABL6Q3YEC7 729 aaPredicted RBP23.91■■□□□ 1.42
PBX3-211ENST00000497091 TAF7LQ5H9L4 462 aa23.91■■□□□ 1.42
PBX3-211ENST00000497091 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.91■■□□□ 1.42
PBX3-211ENST00000497091 RTFDC1Q9BY42 306 aaPredicted RBP23.91■■□□□ 1.42
PBX3-211ENST00000497091 PLIN1O60240 522 aa23.9■■□□□ 1.42
PBX3-211ENST00000497091 IARSP41252 1262 aaKnown RBP23.9■■□□□ 1.42
PBX3-211ENST00000497091 GPSM2P81274 684 aa23.9■■□□□ 1.42
PBX3-211ENST00000497091 ANKRD44Q8N8A2 993 aa23.9■■□□□ 1.42
PBX3-211ENST00000497091 ANKIB1Q9P2G1 1089 aa23.9■■□□□ 1.42
PBX3-211ENST00000497091 RLBP1P12271 317 aa23.89■■□□□ 1.41
PBX3-211ENST00000497091 PANK1Q8TE04 598 aa23.89■■□□□ 1.41
PBX3-211ENST00000497091 VPS33BQ9H267 617 aa23.89■■□□□ 1.41
PBX3-211ENST00000497091 MINPP1Q9UNW1 487 aa23.89■■□□□ 1.41
PBX3-211ENST00000497091 SNED1Q8TER0 1413 aa23.89■■□□□ 1.41
PBX3-211ENST00000497091 C6orf229H3BNL8 230 aa23.88■■□□□ 1.41
PBX3-211ENST00000497091 ITPRIPQ8IWB1 547 aa23.88■■□□□ 1.41
PBX3-211ENST00000497091 LRRFIP2Q9Y608 721 aaKnown RBP23.88■■□□□ 1.41
PBX3-211ENST00000497091 CACNA1SQ13698 1873 aa23.87■■□□□ 1.41
PBX3-211ENST00000497091 LDHAL6AQ6ZMR3 332 aa23.87■■□□□ 1.41
PBX3-211ENST00000497091 LARGE2Q8N3Y3 721 aa23.87■■□□□ 1.41
PBX3-211ENST00000497091 JDP2Q8WYK2 163 aa23.87■■□□□ 1.41
PBX3-211ENST00000497091 ZNF594Q96JF6 807 aaPredicted RBP23.87■■□□□ 1.41
PBX3-211ENST00000497091 PODXL2Q9NZ53 605 aa23.87■■□□□ 1.41
PBX3-211ENST00000497091 PPIP5K2O43314 1243 aa23.86■■□□□ 1.41
PBX3-211ENST00000497091 POLLQ9UGP5 575 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms