RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 ANKK1Q8NFD2 765 aa2.57□□□□□ -2
UBR4-217ENST00000497018 EDEM1Q92611 657 aa2.57□□□□□ -2
UBR4-217ENST00000497018 APPBP2Q92624 585 aa2.57□□□□□ -2
UBR4-217ENST00000497018 EMID1Q96A84 441 aaPredicted RBP2.57□□□□□ -2
UBR4-217ENST00000497018 ZFRQ96KR1 1074 aaKnown RBP2.57□□□□□ -2
UBR4-217ENST00000497018 SLC4A9Q96Q91 983 aa2.57□□□□□ -2
UBR4-217ENST00000497018 FEZ1Q99689 392 aa2.57□□□□□ -2
UBR4-217ENST00000497018 CARD14Q9BXL6 1004 aa2.57□□□□□ -2
UBR4-217ENST00000497018 CCDC113Q9H0I3 377 aa2.57□□□□□ -2
UBR4-217ENST00000497018 UNC93B1Q9H1C4 597 aa2.57□□□□□ -2
UBR4-217ENST00000497018 OSBPL3Q9H4L5 887 aa2.57□□□□□ -2
UBR4-217ENST00000497018 ESF1Q9H501 851 aaKnown RBP2.57□□□□□ -2
UBR4-217ENST00000497018 NEUROD4Q9HD90 331 aa2.57□□□□□ -2
UBR4-217ENST00000497018 PRDM9Q9NQV7 894 aa2.57□□□□□ -2
UBR4-217ENST00000497018 GINM1Q9NU53 330 aa2.57□□□□□ -2
UBR4-217ENST00000497018 KBTBD4Q9NVX7 518 aa2.57□□□□□ -2
UBR4-217ENST00000497018 PRKAG3Q9UGI9 489 aa2.57□□□□□ -2
UBR4-217ENST00000497018 USP3Q9Y6I4 520 aa2.57□□□□□ -2
UBR4-217ENST00000497018 URB2Q14146 1524 aaKnown RBP2.57□□□□□ -2
UBR4-217ENST00000497018 MADDQ8WXG6 1647 aa2.57□□□□□ -2
UBR4-217ENST00000497018 PPRC1Q5VV67 1664 aaKnown RBP2.57□□□□□ -2
UBR4-217ENST00000497018 MAGEB6P1A0A0J9YX57 407 aa2.56□□□□□ -2
UBR4-217ENST00000497018 POTEB3A0JP26 581 aa2.56□□□□□ -2
UBR4-217ENST00000497018 TK2O00142 265 aa2.56□□□□□ -2
UBR4-217ENST00000497018 TSPAN6O43657 245 aa2.56□□□□□ -2
UBR4-217ENST00000497018 PPP1R12BO60237 982 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 INHAP05111 366 aa2.56□□□□□ -2
UBR4-217ENST00000497018 SSBP05455 408 aaKnown RBP eCLIP2.56□□□□□ -2
UBR4-217ENST00000497018 CENPBP07199 599 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 USP17L7P0C7H9 530 aa2.56□□□□□ -2
UBR4-217ENST00000497018 POTEIP0CG38 1075 aa2.56□□□□□ -2
UBR4-217ENST00000497018 HCLS1P14317 486 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 IRS1P35568 1242 aa2.56□□□□□ -2
UBR4-217ENST00000497018 PSEN2P49810 448 aa2.56□□□□□ -2
UBR4-217ENST00000497018 HIRAP54198 1017 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 ERVK-9P63128 1117 aa2.56□□□□□ -2
UBR4-217ENST00000497018 BIRC2Q13490 618 aa2.56□□□□□ -2
UBR4-217ENST00000497018 NFE2Q16621 373 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 BRDTQ58F21 947 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 USPL1Q5W0Q7 1092 aa2.56□□□□□ -2
UBR4-217ENST00000497018 PTCRAQ6ISU1 281 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 POTEBQ6S5H4 581 aa2.56□□□□□ -2
UBR4-217ENST00000497018 C16orf86Q6ZW13 317 aa2.56□□□□□ -2
UBR4-217ENST00000497018 FERMT3Q86UX7 667 aa2.56□□□□□ -2
UBR4-217ENST00000497018 HOMER1Q86YM7 354 aa2.56□□□□□ -2
UBR4-217ENST00000497018 JAMLQ86YT9 394 aa2.56□□□□□ -2
UBR4-217ENST00000497018 KIAA0825Q8IV33 1275 aa2.56□□□□□ -2
UBR4-217ENST00000497018 SLC9A9Q8IVB4 645 aa2.56□□□□□ -2
UBR4-217ENST00000497018 SCUBE3Q8IX30 993 aa2.56□□□□□ -2
UBR4-217ENST00000497018 TMTC2Q8N394 836 aa2.56□□□□□ -2
UBR4-217ENST00000497018 SP7Q8TDD2 431 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 CHMP7Q8WUX9 453 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 FOXJ1Q92949 421 aa2.56□□□□□ -2
UBR4-217ENST00000497018 TSR2Q969E8 191 aaKnown RBP2.56□□□□□ -2
UBR4-217ENST00000497018 SLC10A4Q96EP9 437 aa2.56□□□□□ -2
UBR4-217ENST00000497018 EAF1Q96JC9 268 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 SPON2Q9BUD6 331 aa2.56□□□□□ -2
UBR4-217ENST00000497018 RSRP1Q9BUV0 290 aa2.56□□□□□ -2
UBR4-217ENST00000497018 NOC4LQ9BVI4 516 aaKnown RBP2.56□□□□□ -2
UBR4-217ENST00000497018 SLKQ9H2G2 1235 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 ETNK1Q9HBU6 452 aa2.56□□□□□ -2
UBR4-217ENST00000497018 HOMER2Q9NSB8 354 aa2.56□□□□□ -2
UBR4-217ENST00000497018 GNL3LQ9NVN8 582 aaKnown RBP2.56□□□□□ -2
UBR4-217ENST00000497018 SCHIP1Q9P0W5 487 aaPredicted RBP2.56□□□□□ -2
UBR4-217ENST00000497018 FAM8A1Q9UBU6 413 aa2.56□□□□□ -2
UBR4-217ENST00000497018 VPS9D1Q9Y2B5 631 aa2.56□□□□□ -2
UBR4-217ENST00000497018 LEMD3Q9Y2U8 911 aa2.56□□□□□ -2
UBR4-217ENST00000497018 PCDHB3Q9Y5E6 796 aa2.56□□□□□ -2
UBR4-217ENST00000497018 RPS6KL1Q9Y6S9 549 aa2.56□□□□□ -2
UBR4-217ENST00000497018 PREX1Q8TCU6 1659 aa2.56□□□□□ -2
UBR4-217ENST00000497018 STRCQ7RTU9 1775 aa2.56□□□□□ -2
UBR4-217ENST00000497018 A6NHS1 94 aa2.55□□□□□ -2
UBR4-217ENST00000497018 EML1O00423 815 aa2.55□□□□□ -2
UBR4-217ENST00000497018 BACH1O14867 736 aa2.55□□□□□ -2
UBR4-217ENST00000497018 CPNE3O75131 537 aaKnown RBP2.55□□□□□ -2
UBR4-217ENST00000497018 LRP5O75197 1615 aa2.55□□□□□ -2
UBR4-217ENST00000497018 MYCP01106 439 aaPredicted RBP2.55□□□□□ -2
UBR4-217ENST00000497018 NOS2P35228 1153 aa2.55□□□□□ -2
UBR4-217ENST00000497018 ZAP70P43403 619 aa2.55□□□□□ -2
UBR4-217ENST00000497018 PSMA6P60900 246 aaKnown RBP2.55□□□□□ -2
UBR4-217ENST00000497018 PIP4K2BP78356 416 aa2.55□□□□□ -2
UBR4-217ENST00000497018 EXOSC10Q01780 885 aaKnown RBP2.55□□□□□ -2
UBR4-217ENST00000497018 DNM1Q05193 864 aaKnown RBP2.55□□□□□ -2
UBR4-217ENST00000497018 AAMPQ13685 434 aa2.55□□□□□ -2
UBR4-217ENST00000497018 RASGRF1Q13972 1273 aa2.55□□□□□ -2
UBR4-217ENST00000497018 COL9A2Q14055 689 aaPredicted RBP2.55□□□□□ -2
UBR4-217ENST00000497018 FOXD4L6Q3SYB3 417 aaPredicted RBP2.55□□□□□ -2
UBR4-217ENST00000497018 LONRF3Q496Y0 759 aa2.55□□□□□ -2
UBR4-217ENST00000497018 C2orf27AQ580R0 203 aa2.55□□□□□ -2
UBR4-217ENST00000497018 DALRD3Q5D0E6 543 aaKnown RBP2.55□□□□□ -2
UBR4-217ENST00000497018 INTS6LQ5JSJ4 861 aaKnown RBP2.55□□□□□ -2
UBR4-217ENST00000497018 VARS2Q5ST30 1063 aaKnown RBP2.55□□□□□ -2
UBR4-217ENST00000497018 FOXD4L3Q6VB84 417 aaPredicted RBP2.55□□□□□ -2
UBR4-217ENST00000497018 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.55□□□□□ -2
UBR4-217ENST00000497018 THNSL2Q86YJ6 484 aa2.55□□□□□ -2
UBR4-217ENST00000497018 FAM169BQ8N8A8 192 aa2.55□□□□□ -2
UBR4-217ENST00000497018 RAPGEF6Q8TEU7 1601 aa2.55□□□□□ -2
UBR4-217ENST00000497018 PNISRQ8TF01 805 aaKnown RBP2.55□□□□□ -2
UBR4-217ENST00000497018 ANKRD24Q8TF21 1146 aa2.55□□□□□ -2
UBR4-217ENST00000497018 IL17RAQ96F46 866 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms