RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 IGFBP4P22692 258 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 AMPD1P23109 780 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 SSFA2P28290 1259 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 SRSF11Q05519 484 aaKnown RBP4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 SWI5Q1ZZU3 235 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 CMTR1Q8N1G2 835 aaKnown RBP4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 VTI1AQ96AJ9 217 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 MARK1Q9P0L2 795 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 ADAMTS8Q9UP79 889 aa4.11□□□□□ -1.75
SNRNP48-202ENST00000496946 CDC25BP30305 580 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 RTN1Q16799 776 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 ZNF622Q969S3 477 aaKnown RBP eCLIP4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 IFT43Q96FT9 208 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 SUV39H2Q9H5I1 410 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 RRAGCQ9HB90 399 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 ZDHHC3Q9NYG2 299 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 J3QW42 95 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 M0R2N6 131 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 INPP5BP32019 993 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 C16orf46Q6P387 395 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 NEUROD4Q9HD90 331 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 CHMP3Q9Y3E7 222 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 ERCC6L2Q5T890 1561 aa4.1□□□□□ -1.75
SNRNP48-202ENST00000496946 ACPPP15309 386 aa4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 HOXB4P17483 251 aaPredicted RBP4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 HIRAP54198 1017 aaPredicted RBP4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 DNM1Q05193 864 aaKnown RBP4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 FOXR1Q6PIV2 292 aa4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 NEDD1Q8NHV4 660 aa4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 CCDC87Q9NVE4 849 aa4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 KANSL3Q9P2N6 904 aa4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 RTCBQ9Y3I0 505 aaKnown RBP4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 RRP9O43818 475 aaKnown RBP4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 MICAL2O94851 1124 aa4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 CYP2E1P05181 493 aaPredicted RBP4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 GSK3AP49840 483 aa4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 HSP90AB4PQ58FF6 505 aa4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 CLP1Q92989 425 aaKnown RBP4.09□□□□□ -1.75
SNRNP48-202ENST00000496946 PLEKHD1A6NEE1 506 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 TGFBR3LH3BV60 316 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 ALBP02768 609 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 IRS1P35568 1242 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 ELOAQ14241 798 aaKnown RBP4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 NLRP8Q86W28 1048 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 NUDT16Q96DE0 195 aaKnown RBP4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 KCNMB2Q9Y691 235 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 H3BRB1 525 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 FAM157BP0CG42 384 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 ZAP70P43403 619 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 ZNF468Q5VIY5 522 aaPredicted RBP4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 EDARADDQ8WWZ3 215 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 HHIPQ96QV1 700 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 TUT1Q9H6E5 874 aaKnown RBP4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 ZBTB42B2RXF5 422 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 SMARCA5O60264 1052 aaPredicted RBP4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 XYLBO75191 536 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 ARHGEF15O94989 841 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 CPB1P15086 417 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 COL8A1P27658 744 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 INSM1Q01101 510 aaPredicted RBP4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 C8orf34Q49A92 452 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 AXDND1Q5T1B0 1012 aaPredicted RBP4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 TXNDC11Q6PKC3 985 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 EXOC8Q8IYI6 725 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 C1orf216Q8TAB5 229 aa4.08□□□□□ -1.76
SNRNP48-202ENST00000496946 M0R082 166 aa4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 OIP5O43482 229 aa4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 FOXO3O43524 673 aa4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 EPXP11678 715 aa4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 EIF1AXP47813 144 aaKnown RBP4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 FAM50AQ14320 339 aaKnown RBP4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 COL13A1Q5TAT6 717 aaPredicted RBP4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 FIGNL1Q6PIW4 674 aa4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 ZNF417Q8TAU3 575 aa4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 ZNF587Q96SQ5 575 aaPredicted RBP4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 GSX2Q9BZM3 304 aa4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 TMEM63CQ9P1W3 806 aa4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 MMP20O60882 483 aa4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 CALD1Q05682 793 aaKnown RBP4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 ANP32BQ92688 251 aaKnown RBP4.07□□□□□ -1.76
SNRNP48-202ENST00000496946 ADH6P28332 368 aa4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 MMP14P50281 582 aa4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 C11orf91Q3C1V1 193 aa4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 CHSY3Q70JA7 882 aa4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 NOL8Q76FK4 1167 aaKnown RBP4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 GGNBP2Q9H3C7 697 aa4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 STIM2Q9P246 746 aa4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 RARAP10276 462 aa4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 GRIK4Q16099 956 aa4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 TMTC2Q8N394 836 aa4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 TRIM11Q96F44 468 aa4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 CFHR5Q9BXR6 569 aa4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 UBE2OQ9C0C9 1292 aaKnown RBP4.06□□□□□ -1.76
SNRNP48-202ENST00000496946 BCRP11274 1271 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 ADH7P40394 386 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 DGKGP49619 791 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 HSP90AA2PQ14568 343 aaPredicted RBP4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 ECM1Q16610 540 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 SHISA2Q6UWI4 295 aa4.05□□□□□ -1.76
SNRNP48-202ENST00000496946 FAM35AQ86V20 835 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms