RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 LMNB1P20700 586 aa7.75□□□□□ -1.17
HMGCL-206ENST00000496907 PLBD2Q8NHP8 589 aa7.75□□□□□ -1.17
HMGCL-206ENST00000496907 SETDB2Q96T68 719 aa7.75□□□□□ -1.17
HMGCL-206ENST00000496907 PDZRN3Q9UPQ7 1066 aa7.75□□□□□ -1.17
HMGCL-206ENST00000496907 USP42Q9H9J4 1324 aaKnown RBP7.75□□□□□ -1.17
HMGCL-206ENST00000496907 COL15A1P39059 1388 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 NBPF26B4DH59 902 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 MYL6BP14649 208 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 FXR1P51114 621 aaKnown RBP eCLIP7.74□□□□□ -1.17
HMGCL-206ENST00000496907 MAP2K1Q02750 393 aaPredicted RBP7.74□□□□□ -1.17
HMGCL-206ENST00000496907 DDR1Q08345 913 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 NEXNQ0ZGT2 675 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 GRM1Q13255 1194 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 PDIA6Q15084 440 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 PARP10Q53GL7 1025 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 NBPF10Q6P3W6 841 aaKnown RBP7.74□□□□□ -1.17
HMGCL-206ENST00000496907 TPTE2Q6XPS3 522 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 GIGYF2Q6Y7W6 1299 aaKnown RBP7.74□□□□□ -1.17
HMGCL-206ENST00000496907 COPS6Q7L5N1 327 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 RIC3Q7Z5B4 369 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 NBPF15Q8N660 670 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 TSPYL6Q8N831 410 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 GCC1Q96CN9 775 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 CDCA7LQ96GN5 454 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 NYXQ9GZU5 481 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 CHPF2Q9P2E5 772 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 SRP68Q9UHB9 627 aaKnown RBP7.74□□□□□ -1.17
HMGCL-206ENST00000496907 HDAC5Q9UQL6 1122 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 ZNF330Q9Y3S2 320 aaPredicted RBP7.74□□□□□ -1.17
HMGCL-206ENST00000496907 PTPRCP08575 1304 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 MAP3K15Q6ZN16 1313 aa7.74□□□□□ -1.17
HMGCL-206ENST00000496907 PRAMEF22A3QJZ6 481 aa7.73□□□□□ -1.17
HMGCL-206ENST00000496907 TRIM28Q13263 835 aaKnown RBP7.73□□□□□ -1.17
HMGCL-206ENST00000496907 KSR2Q6VAB6 950 aa7.73□□□□□ -1.17
HMGCL-206ENST00000496907 PPP1R42Q7Z4L9 355 aa7.73□□□□□ -1.17
HMGCL-206ENST00000496907 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.73□□□□□ -1.17
HMGCL-206ENST00000496907 ARHGAP45Q92619 1136 aa7.73□□□□□ -1.17
HMGCL-206ENST00000496907 TBC1D2BQ9UPU7 963 aa7.73□□□□□ -1.17
HMGCL-206ENST00000496907 MYH14Q7Z406 1995 aaKnown RBP7.73□□□□□ -1.17
HMGCL-206ENST00000496907 CASP8AP2Q9UKL3 1982 aa7.73□□□□□ -1.17
HMGCL-206ENST00000496907 RNF123Q5XPI4 1314 aa7.73□□□□□ -1.17
HMGCL-206ENST00000496907 PITPNM2Q9BZ72 1349 aa7.73□□□□□ -1.17
HMGCL-206ENST00000496907 DLG5Q8TDM6 1919 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 SIPA1L3O60292 1781 aaPredicted RBP7.72□□□□□ -1.17
HMGCL-206ENST00000496907 POTECB2RU33 542 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 CAMTA2O94983 1202 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 TM4SF1P30408 202 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 AIMP1Q12904 312 aaKnown RBP7.72□□□□□ -1.17
HMGCL-206ENST00000496907 TCIRG1Q13488 830 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 KRT24Q2M2I5 525 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 USPL1Q5W0Q7 1092 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 DPY19L2Q6NUT2 758 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 XAGE3Q8WTP9 111 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 NECTIN2Q92692 538 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 BEGAINQ9BUH8 593 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 API5Q9BZZ5 524 aaKnown RBP7.72□□□□□ -1.17
HMGCL-206ENST00000496907 CHMP4BQ9H444 224 aaKnown RBP7.72□□□□□ -1.17
HMGCL-206ENST00000496907 KIF16BQ96L93 1317 aa7.72□□□□□ -1.17
HMGCL-206ENST00000496907 WDR33Q9C0J8 1336 aaKnown RBP7.72□□□□□ -1.17
HMGCL-206ENST00000496907 DLEC1Q9Y238 1755 aa7.71□□□□□ -1.17
HMGCL-206ENST00000496907 NPHP1O15259 732 aa7.71□□□□□ -1.18
HMGCL-206ENST00000496907 GTF2E1P29083 439 aaPredicted RBP7.71□□□□□ -1.18
HMGCL-206ENST00000496907 FLIIQ13045 1269 aa7.71□□□□□ -1.18
HMGCL-206ENST00000496907 FKBP5Q13451 457 aaPredicted RBP7.71□□□□□ -1.18
HMGCL-206ENST00000496907 LRP10Q7Z4F1 713 aa7.71□□□□□ -1.18
HMGCL-206ENST00000496907 CCDC191Q8NCU4 936 aa7.71□□□□□ -1.18
HMGCL-206ENST00000496907 SMC4Q9NTJ3 1288 aa7.71□□□□□ -1.18
HMGCL-206ENST00000496907 NIP7Q9Y221 180 aaKnown RBP eCLIP7.71□□□□□ -1.18
HMGCL-206ENST00000496907 UBR2Q8IWV8 1755 aa7.71□□□□□ -1.18
HMGCL-206ENST00000496907 AFDNP55196 1824 aaKnown RBP7.71□□□□□ -1.18
HMGCL-206ENST00000496907 KDM3BQ7LBC6 1761 aa7.7□□□□□ -1.18
HMGCL-206ENST00000496907 TMEM88BA6NKF7 163 aa7.7□□□□□ -1.18
HMGCL-206ENST00000496907 POLRMTO00411 1230 aaKnown RBP7.7□□□□□ -1.18
HMGCL-206ENST00000496907 SERPINB2P05120 415 aa7.7□□□□□ -1.18
HMGCL-206ENST00000496907 RARSP54136 660 aaKnown RBP7.7□□□□□ -1.18
HMGCL-206ENST00000496907 ST5P78524 1137 aa7.7□□□□□ -1.18
HMGCL-206ENST00000496907 DEFB115Q30KQ5 88 aa7.7□□□□□ -1.18
HMGCL-206ENST00000496907 TTLL7Q6ZT98 887 aa7.7□□□□□ -1.18
HMGCL-206ENST00000496907 PAXIP1Q6ZW49 1069 aaPredicted RBP7.7□□□□□ -1.18
HMGCL-206ENST00000496907 ZNF34Q8IZ26 560 aa7.7□□□□□ -1.18
HMGCL-206ENST00000496907 MRPL50Q8N5N7 158 aaKnown RBP7.7□□□□□ -1.18
HMGCL-206ENST00000496907 TTLL6Q8N841 843 aa7.7□□□□□ -1.18
HMGCL-206ENST00000496907 SSH1Q8WYL5 1049 aa7.7□□□□□ -1.18
HMGCL-206ENST00000496907 METTL22Q9BUU2 404 aaPredicted RBP7.7□□□□□ -1.18
HMGCL-206ENST00000496907 OCEL1Q9H607 264 aa7.7□□□□□ -1.18
HMGCL-206ENST00000496907 SZT2Q5T011 3432 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 PI4KAP2A4QPH2 592 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 NFKBIEO00221 500 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 ALDH1L1O75891 902 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 PDE6BP35913 854 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 NFIXQ14938 502 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 ERFEQ4G0M1 354 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 NBPF5PQ86XG9 351 aaPredicted RBP7.69□□□□□ -1.18
HMGCL-206ENST00000496907 PI4KAP1Q8N8J0 262 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 LINS1Q8NG48 757 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 DNAAF4Q8WXU2 420 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 UTP14AQ9BVJ6 771 aaKnown RBP7.69□□□□□ -1.18
HMGCL-206ENST00000496907 BRIP1Q9BX63 1249 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 ZBTB3Q9H5J0 574 aa7.69□□□□□ -1.18
HMGCL-206ENST00000496907 PHAXQ9H814 394 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms