RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 UBAP1LF5GYI3 381 aa9.18□□□□□ -0.94
SNX13-211ENST00000496855 ADH7P40394 386 aa9.18□□□□□ -0.94
SNX13-211ENST00000496855 CHSY3Q70JA7 882 aa9.18□□□□□ -0.94
SNX13-211ENST00000496855 TRAIPQ9BWF2 469 aa9.18□□□□□ -0.94
SNX13-211ENST00000496855 IGFLR1Q9H665 355 aa9.18□□□□□ -0.94
SNX13-211ENST00000496855 FNDC3AQ9Y2H6 1198 aaKnown RBP9.18□□□□□ -0.94
SNX13-211ENST00000496855 TBC1D8BQ0IIM8 1120 aa9.17□□□□□ -0.94
SNX13-211ENST00000496855 EDEM1Q92611 657 aa9.17□□□□□ -0.94
SNX13-211ENST00000496855 NUDT16Q96DE0 195 aaKnown RBP9.17□□□□□ -0.94
SNX13-211ENST00000496855 H3BRB1 525 aa9.16□□□□□ -0.94
SNX13-211ENST00000496855 HOXB4P17483 251 aaPredicted RBP9.16□□□□□ -0.94
SNX13-211ENST00000496855 MZF1P28698 734 aaPredicted RBP9.16□□□□□ -0.94
SNX13-211ENST00000496855 DNM1Q05193 864 aaKnown RBP9.16□□□□□ -0.94
SNX13-211ENST00000496855 DHX32Q7L7V1 743 aaKnown RBP9.16□□□□□ -0.94
SNX13-211ENST00000496855 NLRP13Q86W25 1043 aa9.16□□□□□ -0.94
SNX13-211ENST00000496855 SCARF2Q96GP6 870 aaPredicted RBP9.16□□□□□ -0.94
SNX13-211ENST00000496855 TUT1Q9H6E5 874 aaKnown RBP9.16□□□□□ -0.94
SNX13-211ENST00000496855 RRAGCQ9HB90 399 aa9.16□□□□□ -0.94
SNX13-211ENST00000496855 PDGFAP04085 211 aa9.15□□□□□ -0.94
SNX13-211ENST00000496855 SNRPNP63162 240 aaKnown RBP9.15□□□□□ -0.94
SNX13-211ENST00000496855 AAMPQ13685 434 aa9.15□□□□□ -0.94
SNX13-211ENST00000496855 GLYCTKQ8IVS8 523 aa9.15□□□□□ -0.94
SNX13-211ENST00000496855 DNAJB12Q9NXW2 375 aaKnown RBP9.15□□□□□ -0.94
SNX13-211ENST00000496855 GNEQ9Y223 722 aaKnown RBP9.15□□□□□ -0.94
SNX13-211ENST00000496855 RPLP1P05386 114 aaKnown RBP9.15□□□□□ -0.95
SNX13-211ENST00000496855 PCSK2P16519 638 aa9.15□□□□□ -0.95
SNX13-211ENST00000496855 BEND7Q8N7W2 519 aaPredicted RBP9.15□□□□□ -0.95
SNX13-211ENST00000496855 TLR7Q9NYK1 1049 aaKnown RBP9.15□□□□□ -0.95
SNX13-211ENST00000496855 SLC6A14Q9UN76 642 aa9.15□□□□□ -0.95
SNX13-211ENST00000496855 MMP20O60882 483 aa9.14□□□□□ -0.95
SNX13-211ENST00000496855 DGKGP49619 791 aa9.14□□□□□ -0.95
SNX13-211ENST00000496855 PCSK7Q16549 785 aa9.14□□□□□ -0.95
SNX13-211ENST00000496855 ECM1Q16610 540 aa9.14□□□□□ -0.95
SNX13-211ENST00000496855 KANK3Q6NY19 840 aa9.14□□□□□ -0.95
SNX13-211ENST00000496855 PODNQ7Z5L7 613 aa9.14□□□□□ -0.95
SNX13-211ENST00000496855 TRPM4Q8TD43 1214 aa9.14□□□□□ -0.95
SNX13-211ENST00000496855 POLIQ9UNA4 740 aa9.14□□□□□ -0.95
SNX13-211ENST00000496855 STARD13Q9Y3M8 1113 aa9.14□□□□□ -0.95
SNX13-211ENST00000496855 CNTNAP5Q8WYK1 1306 aa9.13□□□□□ -0.95
SNX13-211ENST00000496855 FZD6O60353 706 aa9.13□□□□□ -0.95
SNX13-211ENST00000496855 MKL2Q9ULH7 1088 aa9.13□□□□□ -0.95
SNX13-211ENST00000496855 ZBTB42B2RXF5 422 aa9.12□□□□□ -0.95
SNX13-211ENST00000496855 RNF225M0QZC1 329 aaPredicted RBP9.12□□□□□ -0.95
SNX13-211ENST00000496855 NRLP54845 237 aa9.12□□□□□ -0.95
SNX13-211ENST00000496855 GPLD1P80108 840 aa9.12□□□□□ -0.95
SNX13-211ENST00000496855 PDE12Q6L8Q7 609 aaKnown RBP9.12□□□□□ -0.95
SNX13-211ENST00000496855 TTC16Q8NEE8 873 aa9.12□□□□□ -0.95
SNX13-211ENST00000496855 GGNBP2Q9H3C7 697 aa9.12□□□□□ -0.95
SNX13-211ENST00000496855 PHF20L1A8MW92 1017 aa9.11□□□□□ -0.95
SNX13-211ENST00000496855 PSAPP07602 524 aa9.11□□□□□ -0.95
SNX13-211ENST00000496855 SOX18P35713 384 aa9.11□□□□□ -0.95
SNX13-211ENST00000496855 PLAURQ03405 335 aa9.11□□□□□ -0.95
SNX13-211ENST00000496855 KCNA1Q09470 495 aa9.11□□□□□ -0.95
SNX13-211ENST00000496855 C8orf34Q49A92 452 aa9.11□□□□□ -0.95
SNX13-211ENST00000496855 LINC00114Q6XXX2 140 aa9.11□□□□□ -0.95
SNX13-211ENST00000496855 CCDC87Q9NVE4 849 aa9.11□□□□□ -0.95
SNX13-211ENST00000496855 NAGPAQ9UK23 515 aa9.11□□□□□ -0.95
SNX13-211ENST00000496855 M0R082 166 aa9.1□□□□□ -0.95
SNX13-211ENST00000496855 ALBP02768 609 aa9.1□□□□□ -0.95
SNX13-211ENST00000496855 HOXD8P13378 290 aaPredicted RBP9.1□□□□□ -0.95
SNX13-211ENST00000496855 PDIA4P13667 645 aaKnown RBP9.1□□□□□ -0.95
SNX13-211ENST00000496855 USP5P45974 858 aa9.1□□□□□ -0.95
SNX13-211ENST00000496855 ARHGAP4P98171 946 aa9.1□□□□□ -0.95
SNX13-211ENST00000496855 XKR5Q6UX68 686 aa9.1□□□□□ -0.95
SNX13-211ENST00000496855 C20orf204Q6ZNR8 217 aa9.1□□□□□ -0.95
SNX13-211ENST00000496855 ZNF438Q7Z4V0 828 aa9.1□□□□□ -0.95
SNX13-211ENST00000496855 ZNF417Q8TAU3 575 aa9.1□□□□□ -0.95
SNX13-211ENST00000496855 ZNF587Q96SQ5 575 aaPredicted RBP9.1□□□□□ -0.95
SNX13-211ENST00000496855 ELP3Q9H9T3 547 aa9.1□□□□□ -0.95
SNX13-211ENST00000496855 ABI2Q9NYB9 513 aaPredicted RBP9.1□□□□□ -0.95
SNX13-211ENST00000496855 SOWAHDA6NJG2 315 aa9.09□□□□□ -0.95
SNX13-211ENST00000496855 MLLT1Q03111 559 aaPredicted RBP9.09□□□□□ -0.95
SNX13-211ENST00000496855 TTC39BQ5VTQ0 682 aaPredicted RBP9.09□□□□□ -0.95
SNX13-211ENST00000496855 FAM35AQ86V20 835 aa9.09□□□□□ -0.95
SNX13-211ENST00000496855 MICALL1Q8N3F8 863 aa9.09□□□□□ -0.95
SNX13-211ENST00000496855 OR13H1Q8NG92 308 aa9.09□□□□□ -0.95
SNX13-211ENST00000496855 A6NHS1 94 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 CPB1P15086 417 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 IRS1P35568 1242 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 KCNMA1Q12791 1236 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 PRDM6Q9NQX0 595 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 TMEM63CQ9P1W3 806 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 PIK3R2O00459 728 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 GNB5O14775 395 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 PSAPL1Q6NUJ1 521 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 GJD3Q8N144 294 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 NSUN5Q96P11 429 aaKnown RBP9.08□□□□□ -0.96
SNX13-211ENST00000496855 BRPF3Q9ULD4 1205 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 IVNS1ABPQ9Y6Y0 642 aa9.08□□□□□ -0.96
SNX13-211ENST00000496855 LOC102724428A0A0B4J2F2 783 aa9.07□□□□□ -0.96
SNX13-211ENST00000496855 SIK1P57059 783 aa9.07□□□□□ -0.96
SNX13-211ENST00000496855 EHHADHQ08426 723 aa9.07□□□□□ -0.96
SNX13-211ENST00000496855 PERM1Q5SV97 790 aa9.07□□□□□ -0.96
SNX13-211ENST00000496855 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
SNX13-211ENST00000496855 HFE2Q6ZVN8 426 aa9.07□□□□□ -0.96
SNX13-211ENST00000496855 NUDT8Q8WV74 236 aa9.07□□□□□ -0.96
SNX13-211ENST00000496855 J3QW42 95 aa9.06□□□□□ -0.96
SNX13-211ENST00000496855 LILRB5O75023 590 aa9.06□□□□□ -0.96
SNX13-211ENST00000496855 GSK3AP49840 483 aa9.06□□□□□ -0.96
SNX13-211ENST00000496855 LPIN3Q9BQK8 851 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms