RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 FOXO3O43524 673 aa7.69□□□□□ -1.18
CD46-218ENST00000496723 GRNP28799 593 aaKnown RBP7.69□□□□□ -1.18
CD46-218ENST00000496723 LRP8Q14114 963 aa7.69□□□□□ -1.18
CD46-218ENST00000496723 DHX32Q7L7V1 743 aaKnown RBP7.69□□□□□ -1.18
CD46-218ENST00000496723 NBPF11Q86T75 865 aa7.69□□□□□ -1.18
CD46-218ENST00000496723 VRTNQ9H8Y1 702 aa7.69□□□□□ -1.18
CD46-218ENST00000496723 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.69□□□□□ -1.18
CD46-218ENST00000496723 USP17L15C9J2P7 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 USP17L10C9JJH3 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 USP17L13C9JLJ4 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 USP17L12C9JPN9 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 USP17L11C9JVI0 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 USP17L21D6R901 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 USP17L18D6R9N7 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 USP17L22D6RA61 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 USP17L17D6RBQ6 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 USP17L19D6RCP7 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 USP17L20D6RJB6 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 CPB1P15086 417 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 LMOD1P29536 600 aaPredicted RBP7.68□□□□□ -1.18
CD46-218ENST00000496723 WEE1P30291 646 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 GPLD1P80108 840 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 USP17L24Q0WX57 530 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 GRIK5Q16478 980 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 PERM1Q5SV97 790 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 ELMSAN1Q6PJG2 1045 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 IGF2-ASQ6U949 168 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 WFDC8Q8IUA0 241 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 MYO19Q96H55 970 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 LPIN3Q9BQK8 851 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 KLK14Q9P0G3 267 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 ZFATQ9P243 1243 aa7.68□□□□□ -1.18
CD46-218ENST00000496723 MICAL2O94851 1124 aa7.67□□□□□ -1.18
CD46-218ENST00000496723 DGKZQ13574 1117 aa7.67□□□□□ -1.18
CD46-218ENST00000496723 C11orf91Q3C1V1 193 aa7.67□□□□□ -1.18
CD46-218ENST00000496723 VTI1AQ96AJ9 217 aa7.67□□□□□ -1.18
CD46-218ENST00000496723 ZBTB42B2RXF5 422 aa7.66□□□□□ -1.18
CD46-218ENST00000496723 EGFRP00533 1210 aa7.66□□□□□ -1.18
CD46-218ENST00000496723 RARAP10276 462 aa7.66□□□□□ -1.18
CD46-218ENST00000496723 TARSP26639 723 aaKnown RBP7.66□□□□□ -1.18
CD46-218ENST00000496723 NRLP54845 237 aa7.66□□□□□ -1.18
CD46-218ENST00000496723 CFAP70Q5T0N1 1121 aa7.66□□□□□ -1.18
CD46-218ENST00000496723 WFDC12Q8WWY7 111 aa7.66□□□□□ -1.18
CD46-218ENST00000496723 IFT43Q96FT9 208 aa7.66□□□□□ -1.18
CD46-218ENST00000496723 QTRT2Q9H974 415 aaKnown RBP7.66□□□□□ -1.18
CD46-218ENST00000496723 RFX1P22670 979 aa7.65□□□□□ -1.18
CD46-218ENST00000496723 CCDC97Q96F63 343 aaPredicted RBP7.65□□□□□ -1.18
CD46-218ENST00000496723 ARXQ96QS3 562 aa7.65□□□□□ -1.18
CD46-218ENST00000496723 KRTAP9-2Q9BYQ4 174 aa7.65□□□□□ -1.18
CD46-218ENST00000496723 SASH3O75995 380 aa7.64□□□□□ -1.19
CD46-218ENST00000496723 KRT25Q7Z3Z0 450 aa7.64□□□□□ -1.19
CD46-218ENST00000496723 SLC51AQ86UW1 340 aa7.64□□□□□ -1.19
CD46-218ENST00000496723 TLR7Q9NYK1 1049 aaKnown RBP7.64□□□□□ -1.19
CD46-218ENST00000496723 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.63□□□□□ -1.19
CD46-218ENST00000496723 HYAL3O43820 417 aaPredicted RBP7.63□□□□□ -1.19
CD46-218ENST00000496723 LGR5O75473 907 aa7.63□□□□□ -1.19
CD46-218ENST00000496723 IREB2P48200 963 aaKnown RBP7.63□□□□□ -1.19
CD46-218ENST00000496723 DCAF11Q8TEB1 546 aa7.63□□□□□ -1.19
CD46-218ENST00000496723 C1orf115Q9H7X2 142 aa7.63□□□□□ -1.19
CD46-218ENST00000496723 SERPINA10Q9UK55 444 aa7.63□□□□□ -1.19
CD46-218ENST00000496723 RTCBQ9Y3I0 505 aaKnown RBP7.63□□□□□ -1.19
CD46-218ENST00000496723 OPLAHO14841 1288 aa7.62□□□□□ -1.19
CD46-218ENST00000496723 NOS3P29474 1203 aa7.62□□□□□ -1.19
CD46-218ENST00000496723 MLLT1Q03111 559 aaPredicted RBP7.62□□□□□ -1.19
CD46-218ENST00000496723 CCDC82Q8N4S0 544 aa7.62□□□□□ -1.19
CD46-218ENST00000496723 SMG9Q9H0W8 520 aaKnown RBP7.62□□□□□ -1.19
CD46-218ENST00000496723 SRA1Q9HD15 236 aaKnown RBP7.62□□□□□ -1.19
CD46-218ENST00000496723 SUPT5HO00267 1087 aaKnown RBP7.61□□□□□ -1.19
CD46-218ENST00000496723 DLL1O00548 723 aa7.61□□□□□ -1.19
CD46-218ENST00000496723 DEAF1O75398 565 aaPredicted RBP7.61□□□□□ -1.19
CD46-218ENST00000496723 PLAURQ03405 335 aa7.61□□□□□ -1.19
CD46-218ENST00000496723 CDCA8Q53HL2 280 aa7.61□□□□□ -1.19
CD46-218ENST00000496723 TMEM130Q8N3G9 435 aa7.61□□□□□ -1.19
CD46-218ENST00000496723 FAM200AQ8TCP9 573 aa7.61□□□□□ -1.19
CD46-218ENST00000496723 RNF112Q9ULX5 631 aa7.61□□□□□ -1.19
CD46-218ENST00000496723 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
CD46-218ENST00000496723 XYLBO75191 536 aa7.6□□□□□ -1.19
CD46-218ENST00000496723 PSAPP07602 524 aa7.6□□□□□ -1.19
CD46-218ENST00000496723 HOXD8P13378 290 aaPredicted RBP7.6□□□□□ -1.19
CD46-218ENST00000496723 EIF2AK2P19525 551 aaKnown RBP7.6□□□□□ -1.19
CD46-218ENST00000496723 SOX18P35713 384 aa7.6□□□□□ -1.19
CD46-218ENST00000496723 MAP4K3Q8IVH8 894 aa7.6□□□□□ -1.19
CD46-218ENST00000496723 CACTIN-AS1Q8N1I8 211 aa7.6□□□□□ -1.19
CD46-218ENST00000496723 LOC102724428A0A0B4J2F2 783 aa7.59□□□□□ -1.19
CD46-218ENST00000496723 SIK1P57059 783 aa7.59□□□□□ -1.19
CD46-218ENST00000496723 PRR23CQ6ZRP0 262 aa7.59□□□□□ -1.19
CD46-218ENST00000496723 HFE2Q6ZVN8 426 aa7.59□□□□□ -1.19
CD46-218ENST00000496723 TREML1Q86YW5 311 aa7.59□□□□□ -1.19
CD46-218ENST00000496723 DZIP1LQ8IYY4 767 aaKnown RBP7.59□□□□□ -1.19
CD46-218ENST00000496723 PLD4Q96BZ4 506 aa7.59□□□□□ -1.19
CD46-218ENST00000496723 MRPL18Q9H0U6 180 aaKnown RBP7.59□□□□□ -1.19
CD46-218ENST00000496723 RBSNQ9H1K0 784 aa7.59□□□□□ -1.19
CD46-218ENST00000496723 AKTIPQ9H8T0 292 aa7.59□□□□□ -1.19
CD46-218ENST00000496723 LRFN2Q9ULH4 789 aa7.59□□□□□ -1.19
CD46-218ENST00000496723 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.58□□□□□ -1.2
CD46-218ENST00000496723 RGL4Q8IZJ4 473 aa7.58□□□□□ -1.2
CD46-218ENST00000496723 CMTR1Q8N1G2 835 aaKnown RBP7.58□□□□□ -1.2
CD46-218ENST00000496723 MEGF10Q96KG7 1140 aa7.58□□□□□ -1.2
CD46-218ENST00000496723 GHRHP01286 108 aa7.57□□□□□ -1.2
CD46-218ENST00000496723 SWI5Q1ZZU3 235 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms