RNA–Protein interactions for RNA: ENST00000496574.6

PKD1-222, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,419 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-222ENST00000496574 RAB11FIP4Q86YS3 637 aa16.26■□□□□ 0.19
PKD1-222ENST00000496574 TMX4Q9H1E5 349 aaPredicted RBP16.26■□□□□ 0.19
PKD1-222ENST00000496574 PHAXQ9H814 394 aaKnown RBP16.26■□□□□ 0.19
PKD1-222ENST00000496574 EBAG9O00559 213 aa16.26■□□□□ 0.19
PKD1-222ENST00000496574 ANXA1P04083 346 aa16.26■□□□□ 0.19
PKD1-222ENST00000496574 HAND2P61296 217 aa16.26■□□□□ 0.19
PKD1-222ENST00000496574 NBPF11Q86T75 865 aa16.26■□□□□ 0.19
PKD1-222ENST00000496574 JADE2Q9NQC1 790 aa16.26■□□□□ 0.19
PKD1-222ENST00000496574 SLC12A7Q9Y666 1083 aa16.26■□□□□ 0.19
PKD1-222ENST00000496574 KARSQ15046 597 aaKnown RBP16.25■□□□□ 0.19
PKD1-222ENST00000496574 EHBP1Q8NDI1 1231 aa16.25■□□□□ 0.19
PKD1-222ENST00000496574 AKAP2Q9Y2D5 859 aa16.25■□□□□ 0.19
PKD1-222ENST00000496574 RAPGEF6Q8TEU7 1601 aa16.25■□□□□ 0.19
PKD1-222ENST00000496574 KLF18A0A0U1RQI7 1052 aa16.25■□□□□ 0.19
PKD1-222ENST00000496574 SGSM2O43147 1006 aa16.25■□□□□ 0.19
PKD1-222ENST00000496574 MARCKSP29966 332 aaPredicted RBP16.25■□□□□ 0.19
PKD1-222ENST00000496574 CABP4P57796 275 aa16.25■□□□□ 0.19
PKD1-222ENST00000496574 PIP4K2BP78356 416 aa16.25■□□□□ 0.19
PKD1-222ENST00000496574 PPP2R3AQ06190 1150 aa16.25■□□□□ 0.19
PKD1-222ENST00000496574 SSRP1Q08945 709 aaKnown RBP16.25■□□□□ 0.19
PKD1-222ENST00000496574 LRMPQ12912 555 aa16.25■□□□□ 0.19
PKD1-222ENST00000496574 ESCO1Q5FWF5 840 aa16.25■□□□□ 0.19
PKD1-222ENST00000496574 DDX46Q7L014 1031 aaKnown RBP16.25■□□□□ 0.19
PKD1-222ENST00000496574 CARD6Q9BX69 1037 aa16.25■□□□□ 0.19
PKD1-222ENST00000496574 CKAP4Q07065 602 aaKnown RBP16.25■□□□□ 0.19
PKD1-222ENST00000496574 PUF60Q9UHX1 559 aaKnown RBP16.25■□□□□ 0.19
PKD1-222ENST00000496574 ZNF215Q9UL58 517 aaPredicted RBP16.25■□□□□ 0.19
PKD1-222ENST00000496574 LEO1Q8WVC0 666 aaPredicted RBP16.25■□□□□ 0.19
PKD1-222ENST00000496574 RAD50Q92878 1312 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 SHANK2Q9UPX8 1470 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 HDXQ7Z353 690 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 MICU3Q86XE3 530 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 USHBP1Q8N6Y0 703 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 SLC26A8Q96RN1 970 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 ZFYVE27Q5T4F4 411 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 ZBTB9Q96C00 473 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 CCDC85AQ96PX6 553 aaPredicted RBP16.24■□□□□ 0.19
PKD1-222ENST00000496574 NAPBQ9H115 298 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 CTTNBP2Q8WZ74 1663 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 DNA2P51530 1060 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 ATL3Q6DD88 541 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 LZTFL1Q9NQ48 299 aa16.24■□□□□ 0.19
PKD1-222ENST00000496574 A0A1B0GUL7 405 aa16.23■□□□□ 0.19
PKD1-222ENST00000496574 IFIT3O14879 490 aaKnown RBP16.23■□□□□ 0.19
PKD1-222ENST00000496574 METAP2P50579 478 aaKnown RBP eCLIP16.23■□□□□ 0.191e-6■■■■□ 23.1
PKD1-222ENST00000496574 NAA15Q9BXJ9 866 aaKnown RBP16.23■□□□□ 0.19
PKD1-222ENST00000496574 PYCARDQ9ULZ3 195 aa16.23■□□□□ 0.19
PKD1-222ENST00000496574 HSPA4P34932 840 aa16.23■□□□□ 0.19
PKD1-222ENST00000496574 NCOA7Q8NI08 942 aa16.23■□□□□ 0.19
PKD1-222ENST00000496574 PTPDC1A2A3K4 754 aa16.23■□□□□ 0.19
PKD1-222ENST00000496574 MATR3P43243 847 aaKnown RBP eCLIP16.23■□□□□ 0.19
PKD1-222ENST00000496574 HLTFQ14527 1009 aaKnown RBP eCLIP16.23■□□□□ 0.19
PKD1-222ENST00000496574 CACNA2D4Q7Z3S7 1137 aa16.23■□□□□ 0.19
PKD1-222ENST00000496574 CTAGE1Q96RT6 745 aa16.23■□□□□ 0.19
PKD1-222ENST00000496574 ADGRL2O95490 1459 aa16.23■□□□□ 0.19
PKD1-222ENST00000496574 A0A087WZG4 1122 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 RHOXF2BP0C7M4 288 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 MCMDC2Q4G0Z9 681 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 MPRIPQ6WCQ1 1025 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 ALS2CR12Q96Q35 445 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 RHOXF2Q9BQY4 288 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.22■□□□□ 0.19
PKD1-222ENST00000496574 MYL5Q02045 173 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 ZHX3Q9H4I2 956 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 A0A1B0GVL5 298 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 ENOX2Q16206 610 aaKnown RBP16.22■□□□□ 0.19
PKD1-222ENST00000496574 BMP2KQ9NSY1 1161 aaPredicted RBP16.22■□□□□ 0.19
PKD1-222ENST00000496574 IMPACTQ9P2X3 320 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 ATP10BO94823 1461 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 BAG1Q99933 345 aaPredicted RBP16.22■□□□□ 0.19
PKD1-222ENST00000496574 ALG1Q9BT22 464 aa16.22■□□□□ 0.19
PKD1-222ENST00000496574 BCCIPQ9P287 314 aaKnown RBP eCLIP16.22■□□□□ 0.19
PKD1-222ENST00000496574 DTNBO60941 627 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 HSF2BPO75031 334 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 IFFO1Q0D2I5 559 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 GNL3LQ9NVN8 582 aaKnown RBP16.21■□□□□ 0.19
PKD1-222ENST00000496574 WDR62O43379 1518 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 A0A1W2PP64 1363 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 METTL24Q5JXM2 366 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 ZNF569Q5MCW4 686 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 KIAA1524Q8TCG1 905 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 PA2G4Q9UQ80 394 aaKnown RBP16.21■□□□□ 0.19
PKD1-222ENST00000496574 SPAG1Q07617 926 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 EIF4A2Q14240 407 aaKnown RBP16.21■□□□□ 0.19
PKD1-222ENST00000496574 SYCP1Q15431 976 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 SPECC1Q5M775 1068 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 CCDC144CPQ8IYA2 1237 aa16.21■□□□□ 0.19
PKD1-222ENST00000496574 CCDC43Q96MW1 224 aaKnown RBP16.21■□□□□ 0.19
PKD1-222ENST00000496574 SSBP05455 408 aaKnown RBP eCLIP16.2■□□□□ 0.18
PKD1-222ENST00000496574 CHPF2Q9P2E5 772 aa16.2■□□□□ 0.18
PKD1-222ENST00000496574 AOX1Q06278 1338 aa16.2■□□□□ 0.18
PKD1-222ENST00000496574 ERCC6LQ2NKX8 1250 aa16.2■□□□□ 0.18
PKD1-222ENST00000496574 AMOTQ4VCS5 1084 aa16.2■□□□□ 0.18
PKD1-222ENST00000496574 TDRD12Q587J7 1177 aaKnown RBP16.2■□□□□ 0.18
PKD1-222ENST00000496574 SOGA3Q5TF21 947 aa16.2■□□□□ 0.18
PKD1-222ENST00000496574 G2E3Q7L622 706 aa16.2■□□□□ 0.18
PKD1-222ENST00000496574 ANKRD24Q8TF21 1146 aa16.2■□□□□ 0.18
PKD1-222ENST00000496574 INCENPQ9NQS7 918 aa16.2■□□□□ 0.18
PKD1-222ENST00000496574 PALD1Q9ULE6 856 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms