RNA–Protein interactions for RNA: ENST00000496524.5

NPHP1-211, Transcript of nephrocystin 1, humanhuman

TSL 2

Gene NPHP1, Length 10,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-211ENST00000496524 RUFY4Q6ZNE9 571 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 PSMD1Q99460 953 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 LIMCH1Q9UPQ0 1083 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 SSRP1Q08945 709 aaKnown RBP9.33□□□□□ -0.92
NPHP1-211ENST00000496524 FSIP1Q8NA03 581 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 DCAF8L1A6NGE4 600 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 N4BP3O15049 544 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 PFDN1O60925 122 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 KRT13P13646 458 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 TCERG1LQ5VWI1 586 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 PHLDB3Q6NSJ2 640 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 UBA5Q9GZZ9 404 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 NOB1Q9ULX3 412 aaKnown RBP9.33□□□□□ -0.92
NPHP1-211ENST00000496524 FAM169AQ9Y6X4 670 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 PDCD7Q8N8D1 485 aaKnown RBP9.33□□□□□ -0.92
NPHP1-211ENST00000496524 ARHGEF2Q92974 986 aaKnown RBP9.33□□□□□ -0.92
NPHP1-211ENST00000496524 POLA1P09884 1462 aaPredicted RBP9.33□□□□□ -0.92
NPHP1-211ENST00000496524 TERF1P54274 439 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 FKBP4Q02790 459 aaKnown RBP eCLIP9.33□□□□□ -0.92
NPHP1-211ENST00000496524 RPAINQ86UA6 219 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 HOMEZQ8IX15 550 aa9.33□□□□□ -0.92
NPHP1-211ENST00000496524 RNF41Q9H4P4 317 aaPredicted RBP9.33□□□□□ -0.92
NPHP1-211ENST00000496524 USP5P45974 858 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 RAB11FIP4Q86YS3 637 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 MPHOSPH8Q99549 860 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 ZSWIM4Q9H7M6 989 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 KCNK9Q9NPC2 374 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 INPP1P49441 399 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 NLRP5P59047 1200 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 MSANTD4Q8NCY6 345 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 PLCB1Q9NQ66 1216 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 RNF8O76064 485 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 AIDAQ96BJ3 306 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 SYNCQ9H7C4 482 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 CHMP2AO43633 222 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 SYCP3Q8IZU3 236 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 GSDMBQ8TAX9 411 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 ACTN4O43707 911 aaKnown RBP9.32□□□□□ -0.92
NPHP1-211ENST00000496524 SMARCC2Q8TAQ2 1214 aa9.32□□□□□ -0.92
NPHP1-211ENST00000496524 ZNF622Q969S3 477 aaKnown RBP eCLIP9.32□□□□□ -0.92
NPHP1-211ENST00000496524 PLEKHO1Q53GL0 409 aaPredicted RBP9.31□□□□□ -0.92
NPHP1-211ENST00000496524 NAA16Q6N069 864 aaPredicted RBP9.31□□□□□ -0.92
NPHP1-211ENST00000496524 CCDC194A0A1B0GVG4 234 aa9.31□□□□□ -0.92
NPHP1-211ENST00000496524 COG7P83436 770 aa9.31□□□□□ -0.92
NPHP1-211ENST00000496524 GIPC1O14908 333 aa9.31□□□□□ -0.92
NPHP1-211ENST00000496524 UTP14AQ9BVJ6 771 aaKnown RBP9.31□□□□□ -0.92
NPHP1-211ENST00000496524 EXOC1Q9NV70 894 aa9.31□□□□□ -0.92
NPHP1-211ENST00000496524 TMEM87AQ8NBN3 555 aa9.31□□□□□ -0.92
NPHP1-211ENST00000496524 AACSQ86V21 672 aa9.31□□□□□ -0.92
NPHP1-211ENST00000496524 CEP126Q9P2H0 1117 aa9.31□□□□□ -0.92
NPHP1-211ENST00000496524 KIF1BPQ96EK5 621 aa9.31□□□□□ -0.92
NPHP1-211ENST00000496524 FAF1Q9UNN5 650 aaPredicted RBP9.31□□□□□ -0.92
NPHP1-211ENST00000496524 UBA7P41226 1012 aa9.31□□□□□ -0.92
NPHP1-211ENST00000496524 MICAL1Q8TDZ2 1067 aa9.31□□□□□ -0.92
NPHP1-211ENST00000496524 TMX1Q9H3N1 280 aa9.31□□□□□ -0.92
NPHP1-211ENST00000496524 CKAP2LQ8IYA6 745 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 LRRD1A4D1F6 860 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 TNPO1Q92973 898 aaKnown RBP9.3□□□□□ -0.92
NPHP1-211ENST00000496524 INF2Q27J81 1249 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 MUM1Q2TAK8 710 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 ERO1AQ96HE7 468 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 TRIM4Q9C037 500 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 SLC12A7Q9Y666 1083 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 SRGAP1Q7Z6B7 1085 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 SATB2Q9UPW6 733 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 WDHD1O75717 1129 aaPredicted RBP9.3□□□□□ -0.92
NPHP1-211ENST00000496524 CCDC65Q8IXS2 484 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 FAM200AQ8TCP9 573 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 TRIM47Q96LD4 638 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 CACYBPQ9HB71 228 aaKnown RBP9.3□□□□□ -0.92
NPHP1-211ENST00000496524 GOLGA6CA6NDK9 693 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 GOLGA6DP0CG33 693 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 KCNG4Q8TDN1 519 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 CABS1Q96KC9 395 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 GOLGA6AQ9NYA3 693 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 LRP2BPQ9P2M1 347 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 PPP1R7Q15435 360 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 PFDN4Q9NQP4 134 aa9.3□□□□□ -0.92
NPHP1-211ENST00000496524 NBPF7P0C2Y1 421 aaPredicted RBP9.29□□□□□ -0.92
NPHP1-211ENST00000496524 TRAF1Q13077 416 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 ZSCAN23Q3MJ62 389 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 BICDL1Q6ZP65 573 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 CATIPQ7Z7H3 387 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 MKNK2Q9HBH9 465 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.29□□□□□ -0.92
NPHP1-211ENST00000496524 MX1P20591 662 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 GEN1Q17RS7 908 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 VSIG1Q86XK7 387 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 TBC1D31Q96DN5 1066 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 UTP11Q9Y3A2 253 aaKnown RBP9.29□□□□□ -0.92
NPHP1-211ENST00000496524 DHX57Q6P158 1386 aaKnown RBP9.29□□□□□ -0.92
NPHP1-211ENST00000496524 SMIM24O75264 130 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 CRCPO75575 148 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 LGSNQ5TDP6 509 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 ARMC9Q7Z3E5 817 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 HIP1RO75146 1068 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 FCHSD2O94868 740 aa9.29□□□□□ -0.92
NPHP1-211ENST00000496524 ZSCAN29Q8IWY8 852 aaPredicted RBP9.29□□□□□ -0.92
NPHP1-211ENST00000496524 UBLCP1Q8WVY7 318 aaPredicted RBP9.29□□□□□ -0.92
NPHP1-211ENST00000496524 NUTM2FA1L443 756 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms