RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 CRY2Q49AN0 593 aa16.94■□□□□ 0.3
PTPN7-218ENST00000496197 LMBR1LQ6UX01 489 aa16.94■□□□□ 0.3
PTPN7-218ENST00000496197 SLC51AQ86UW1 340 aa16.94■□□□□ 0.3
PTPN7-218ENST00000496197 KLHL34Q8N239 644 aa16.94■□□□□ 0.3
PTPN7-218ENST00000496197 NLGN2Q8NFZ4 835 aa16.94■□□□□ 0.3
PTPN7-218ENST00000496197 PPP1R1BQ9UD71 204 aaPredicted RBP16.94■□□□□ 0.3
PTPN7-218ENST00000496197 SRCAPQ6ZRS2 3230 aa16.94■□□□□ 0.3
PTPN7-218ENST00000496197 SLX4Q8IY92 1834 aa16.94■□□□□ 0.3
PTPN7-218ENST00000496197 GNAI2P04899 355 aa16.93■□□□□ 0.3
PTPN7-218ENST00000496197 SF3B3Q15393 1217 aaKnown RBP16.93■□□□□ 0.3
PTPN7-218ENST00000496197 FAM161AQ3B820 660 aa16.93■□□□□ 0.3
PTPN7-218ENST00000496197 NLRP3Q96P20 1036 aa16.93■□□□□ 0.3
PTPN7-218ENST00000496197 FHDC1Q9C0D6 1143 aaPredicted RBP16.93■□□□□ 0.3
PTPN7-218ENST00000496197 GREM2Q9H772 168 aa16.93■□□□□ 0.3
PTPN7-218ENST00000496197 KCNA3P22001 575 aa16.93■□□□□ 0.3
PTPN7-218ENST00000496197 SEC31BQ9NQW1 1179 aa16.93■□□□□ 0.3
PTPN7-218ENST00000496197 A0A0G2JLW4 131 aa16.92■□□□□ 0.3
PTPN7-218ENST00000496197 PNMA6EA0A0J9YXQ4 647 aa16.92■□□□□ 0.3
PTPN7-218ENST00000496197 SRGNP10124 158 aa16.92■□□□□ 0.3
PTPN7-218ENST00000496197 DPEP1P16444 411 aa16.92■□□□□ 0.3
PTPN7-218ENST00000496197 PDE6BP35913 854 aa16.92■□□□□ 0.3
PTPN7-218ENST00000496197 C2CD5Q86YS7 1000 aa16.92■□□□□ 0.3
PTPN7-218ENST00000496197 CEP85Q6P2H3 762 aa16.91■□□□□ 0.3
PTPN7-218ENST00000496197 SIRT2Q8IXJ6 389 aa16.91■□□□□ 0.3
PTPN7-218ENST00000496197 PCDHB15Q9Y5E8 787 aa16.91■□□□□ 0.3
PTPN7-218ENST00000496197 CD2APQ9Y5K6 639 aa16.91■□□□□ 0.3
PTPN7-218ENST00000496197 LRRC37AA6NMS7 1700 aa16.91■□□□□ 0.3
PTPN7-218ENST00000496197 RFX5P48382 616 aaPredicted RBP16.9■□□□□ 0.3
PTPN7-218ENST00000496197 KLHDC4Q8TBB5 520 aa16.9■□□□□ 0.3
PTPN7-218ENST00000496197 WWC3Q9ULE0 1092 aa16.9■□□□□ 0.3
PTPN7-218ENST00000496197 CHMP3Q9Y3E7 222 aa16.9■□□□□ 0.3
PTPN7-218ENST00000496197 RTL9Q8NET4 1388 aa16.9■□□□□ 0.3
PTPN7-218ENST00000496197 ITGA6P23229 1130 aa16.89■□□□□ 0.29
PTPN7-218ENST00000496197 MTX1Q13505 466 aa16.89■□□□□ 0.29
PTPN7-218ENST00000496197 CCDC152Q4G0S7 254 aa16.89■□□□□ 0.29
PTPN7-218ENST00000496197 CELF1Q92879 486 aaKnown RBP16.89■□□□□ 0.29
PTPN7-218ENST00000496197 ZNF594Q96JF6 807 aaPredicted RBP16.89■□□□□ 0.29
PTPN7-218ENST00000496197 HOXA10P31260 410 aaPredicted RBP16.88■□□□□ 0.29
PTPN7-218ENST00000496197 TGFB2P61812 414 aa16.88■□□□□ 0.29
PTPN7-218ENST00000496197 RPGRQ92834 1020 aaKnown RBP16.88■□□□□ 0.29
PTPN7-218ENST00000496197 SYT17Q9BSW7 474 aa16.88■□□□□ 0.29
PTPN7-218ENST00000496197 ARFGEF1Q9Y6D6 1849 aa16.88■□□□□ 0.29
PTPN7-218ENST00000496197 GOLGB1Q14789 3259 aaKnown RBP16.87■□□□□ 0.29
PTPN7-218ENST00000496197 H0YIN7 160 aa16.87■□□□□ 0.29
PTPN7-218ENST00000496197 HSP90B1P14625 803 aaKnown RBP16.87■□□□□ 0.29
PTPN7-218ENST00000496197 NPR1P16066 1061 aa16.87■□□□□ 0.29
PTPN7-218ENST00000496197 ATP8B2P98198 1209 aa16.87■□□□□ 0.29
PTPN7-218ENST00000496197 MASTLQ96GX5 879 aa16.87■□□□□ 0.29
PTPN7-218ENST00000496197 LTBP1Q14766 1721 aa16.87■□□□□ 0.29
PTPN7-218ENST00000496197 SRGAP3O43295 1099 aa16.86■□□□□ 0.29
PTPN7-218ENST00000496197 POLA2Q14181 598 aa16.86■□□□□ 0.29
PTPN7-218ENST00000496197 ZNF622Q969S3 477 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■□□□□ 10.3
PTPN7-218ENST00000496197 PA2G4Q9UQ80 394 aaKnown RBP16.86■□□□□ 0.29
PTPN7-218ENST00000496197 PTPN12Q05209 780 aaKnown RBP16.86■□□□□ 0.29
PTPN7-218ENST00000496197 STYK1Q6J9G0 422 aa16.86■□□□□ 0.29
PTPN7-218ENST00000496197 DDX46Q7L014 1031 aaKnown RBP16.86■□□□□ 0.29
PTPN7-218ENST00000496197 SSH3Q8TE77 659 aa16.86■□□□□ 0.29
PTPN7-218ENST00000496197 RBM17Q96I25 401 aaKnown RBP16.86■□□□□ 0.29
PTPN7-218ENST00000496197 CHMP4BQ9H444 224 aaKnown RBP16.86■□□□□ 0.29
PTPN7-218ENST00000496197 IFIT5Q13325 482 aaKnown RBP16.85■□□□□ 0.29
PTPN7-218ENST00000496197 GRAPQ13588 217 aa16.85■□□□□ 0.29
PTPN7-218ENST00000496197 OLFM4Q6UX06 510 aa16.85■□□□□ 0.29
PTPN7-218ENST00000496197 GRAPLQ8TC17 118 aaPredicted RBP16.85■□□□□ 0.29
PTPN7-218ENST00000496197 CRAMP1Q96RY5 1269 aa16.85■□□□□ 0.29
PTPN7-218ENST00000496197 PUS3Q9BZE2 481 aaKnown RBP16.85■□□□□ 0.29
PTPN7-218ENST00000496197 HDAC5Q9UQL6 1122 aa16.85■□□□□ 0.29
PTPN7-218ENST00000496197 ANKRD18BA2A2Z9 1011 aa16.84■□□□□ 0.29
PTPN7-218ENST00000496197 CCDC57Q2TAC2 916 aa16.84■□□□□ 0.29
PTPN7-218ENST00000496197 PRPF40BQ6NWY9 871 aaKnown RBP16.84■□□□□ 0.29
PTPN7-218ENST00000496197 NEFLP07196 543 aa16.83■□□□□ 0.28
PTPN7-218ENST00000496197 LRRC24Q50LG9 513 aa16.83■□□□□ 0.28
PTPN7-218ENST00000496197 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
PTPN7-218ENST00000496197 PDZRN3Q9UPQ7 1066 aa16.83■□□□□ 0.28
PTPN7-218ENST00000496197 FER1L6Q2WGJ9 1857 aa16.82■□□□□ 0.28
PTPN7-218ENST00000496197 DUOX1Q9NRD9 1551 aa16.82■□□□□ 0.28
PTPN7-218ENST00000496197 SNED1Q8TER0 1413 aa16.82■□□□□ 0.28
PTPN7-218ENST00000496197 RPS8P62241 208 aaKnown RBP16.82■□□□□ 0.28
PTPN7-218ENST00000496197 SIL1Q9H173 461 aa16.82■□□□□ 0.28
PTPN7-218ENST00000496197 PPEF1O14829 653 aaPredicted RBP16.81■□□□□ 0.28
PTPN7-218ENST00000496197 ANKRD18AQ8IVF6 992 aa16.81■□□□□ 0.28
PTPN7-218ENST00000496197 CDC5LQ99459 802 aaKnown RBP16.81■□□□□ 0.28
PTPN7-218ENST00000496197 COPRSQ9NQ92 184 aa16.81■□□□□ 0.28
PTPN7-218ENST00000496197 PIM2Q9P1W9 311 aa16.81■□□□□ 0.28
PTPN7-218ENST00000496197 ZNF219Q9P2Y4 722 aaPredicted RBP16.81■□□□□ 0.28
PTPN7-218ENST00000496197 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.81■□□□□ 0.28
PTPN7-218ENST00000496197 IGHDP01880 384 aa16.8■□□□□ 0.28
PTPN7-218ENST00000496197 ALDH1B1P30837 517 aa16.8■□□□□ 0.28
PTPN7-218ENST00000496197 AAMPQ13685 434 aa16.8■□□□□ 0.28
PTPN7-218ENST00000496197 ATG9AQ7Z3C6 839 aa16.8■□□□□ 0.28
PTPN7-218ENST00000496197 TTLL6Q8N841 843 aa16.8■□□□□ 0.28
PTPN7-218ENST00000496197 C7orf43Q8WVR3 580 aa16.8■□□□□ 0.28
PTPN7-218ENST00000496197 CNKSR1Q969H4 720 aa16.8■□□□□ 0.28
PTPN7-218ENST00000496197 WTIPA6NIX2 430 aaPredicted RBP16.8■□□□□ 0.28
PTPN7-218ENST00000496197 TAF7LQ5H9L4 462 aa16.8■□□□□ 0.28
PTPN7-218ENST00000496197 EXOC6BQ9Y2D4 811 aa16.8■□□□□ 0.28
PTPN7-218ENST00000496197 C21orf2O43822 256 aa16.79■□□□□ 0.28
PTPN7-218ENST00000496197 IGHMBP2P38935 993 aaKnown RBP16.79■□□□□ 0.28
PTPN7-218ENST00000496197 LDHAL6AQ6ZMR3 332 aa16.79■□□□□ 0.28
PTPN7-218ENST00000496197 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
PTPN7-218ENST00000496197 RIPOR2Q9Y4F9 1068 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms