RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 DALRD3Q5D0E6 543 aaKnown RBP6.9□□□□□ -1.3
XPA-204ENST00000496104 CYP4F22Q6NT55 531 aa6.9□□□□□ -1.3
XPA-204ENST00000496104 ANKLE1Q8NAG6 615 aa6.9□□□□□ -1.3
XPA-204ENST00000496104 CAPNS2Q96L46 248 aa6.9□□□□□ -1.3
XPA-204ENST00000496104 CDK19Q9BWU1 502 aa6.9□□□□□ -1.3
XPA-204ENST00000496104 PIM2Q9P1W9 311 aa6.9□□□□□ -1.3
XPA-204ENST00000496104 RGPD2P0DJD1 1756 aa6.9□□□□□ -1.31
XPA-204ENST00000496104 ITGB4P16144 1822 aa6.9□□□□□ -1.31
XPA-204ENST00000496104 PPEF1O14829 653 aaPredicted RBP6.89□□□□□ -1.31
XPA-204ENST00000496104 LCE2CQ5TA81 110 aa6.89□□□□□ -1.31
XPA-204ENST00000496104 LDHDQ86WU2 507 aa6.89□□□□□ -1.31
XPA-204ENST00000496104 CRIPAKQ8N1N5 446 aa6.89□□□□□ -1.31
XPA-204ENST00000496104 NECTIN2Q92692 538 aa6.89□□□□□ -1.31
XPA-204ENST00000496104 C1orf115Q9H7X2 142 aa6.89□□□□□ -1.31
XPA-204ENST00000496104 SCN4AP35499 1836 aa6.89□□□□□ -1.31
XPA-204ENST00000496104 FER1L6Q2WGJ9 1857 aa6.89□□□□□ -1.31
XPA-204ENST00000496104 DDNO94850 711 aaPredicted RBP6.88□□□□□ -1.31
XPA-204ENST00000496104 DDR1Q08345 913 aa6.88□□□□□ -1.31
XPA-204ENST00000496104 ITPK1Q13572 414 aa6.88□□□□□ -1.31
XPA-204ENST00000496104 GPR101Q96P66 508 aaPredicted RBP6.88□□□□□ -1.31
XPA-204ENST00000496104 ZIC5Q96T25 663 aa6.88□□□□□ -1.31
XPA-204ENST00000496104 TAF1DQ9H5J8 278 aaPredicted RBP6.88□□□□□ -1.31
XPA-204ENST00000496104 NLRP2Q9NX02 1062 aa6.88□□□□□ -1.31
XPA-204ENST00000496104 IRF6O14896 467 aa6.87□□□□□ -1.31
XPA-204ENST00000496104 GYS1P13807 737 aa6.87□□□□□ -1.31
XPA-204ENST00000496104 COL5A3P25940 1745 aaPredicted RBP6.87□□□□□ -1.31
XPA-204ENST00000496104 EYSQ5T1H1 3165 aa6.86□□□□□ -1.31
XPA-204ENST00000496104 CEP290O15078 2479 aa6.86□□□□□ -1.31
XPA-204ENST00000496104 OSBPP22059 807 aa6.86□□□□□ -1.31
XPA-204ENST00000496104 SUZ12Q15022 739 aaKnown RBP6.86□□□□□ -1.31
XPA-204ENST00000496104 NUDT18Q6ZVK8 323 aa6.86□□□□□ -1.31
XPA-204ENST00000496104 NBPF15Q8N660 670 aa6.86□□□□□ -1.31
XPA-204ENST00000496104 COL25A1Q9BXS0 654 aaPredicted RBP6.86□□□□□ -1.31
XPA-204ENST00000496104 CCDC87Q9NVE4 849 aa6.86□□□□□ -1.31
XPA-204ENST00000496104 LAMB4A4D0S4 1761 aa6.86□□□□□ -1.31
XPA-204ENST00000496104 NRXN2Q9P2S2 1712 aa6.86□□□□□ -1.31
XPA-204ENST00000496104 TLL1O43897 1013 aa6.85□□□□□ -1.31
XPA-204ENST00000496104 AMHR2Q16671 573 aa6.85□□□□□ -1.31
XPA-204ENST00000496104 CST9Q5W186 159 aa6.85□□□□□ -1.31
XPA-204ENST00000496104 MAP1SQ66K74 1059 aaPredicted RBP6.85□□□□□ -1.31
XPA-204ENST00000496104 PCDHB3Q9Y5E6 796 aa6.85□□□□□ -1.31
XPA-204ENST00000496104 MYH14Q7Z406 1995 aaKnown RBP6.85□□□□□ -1.31
XPA-204ENST00000496104 TRPM7Q96QT4 1865 aa6.85□□□□□ -1.31
XPA-204ENST00000496104 AFDNP55196 1824 aaKnown RBP6.85□□□□□ -1.31
XPA-204ENST00000496104 COL11A2P13942 1736 aaPredicted RBP6.84□□□□□ -1.31
XPA-204ENST00000496104 KDRP35968 1356 aa6.84□□□□□ -1.31
XPA-204ENST00000496104 AXIN1O15169 862 aa6.84□□□□□ -1.31
XPA-204ENST00000496104 GNPATO15228 680 aa6.84□□□□□ -1.31
XPA-204ENST00000496104 S1PR4O95977 384 aa6.84□□□□□ -1.31
XPA-204ENST00000496104 SWT1Q5T5J6 900 aaKnown RBP6.84□□□□□ -1.31
XPA-204ENST00000496104 BLOC1S3Q6QNY0 202 aa6.84□□□□□ -1.31
XPA-204ENST00000496104 SLF2Q8IX21 1173 aa6.84□□□□□ -1.31
XPA-204ENST00000496104 ANKRD24Q8TF21 1146 aa6.84□□□□□ -1.31
XPA-204ENST00000496104 DDX21Q9NR30 783 aaKnown RBP eCLIP6.84□□□□□ -1.31
XPA-204ENST00000496104 ABT1Q9ULW3 272 aaKnown RBP6.84□□□□□ -1.31
XPA-204ENST00000496104 INSRP06213 1382 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 FAM181BA6NEQ2 426 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 AVPP01185 164 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 FECHP22830 423 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 MAP2K2P36507 400 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 MAP2K5Q13163 448 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 GRM1Q13255 1194 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 CIAPIN1Q6FI81 312 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 CNTROBQ8N137 903 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 CCDC102AQ96A19 550 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 ARID3AQ99856 593 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 PKD2L1Q9P0L9 805 aa6.83□□□□□ -1.32
XPA-204ENST00000496104 CARMIL3Q8ND23 1372 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 TTC21BQ7Z4L5 1316 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 ZNF541Q9H0D2 1346 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 MON2Q7Z3U7 1717 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 TERTO14746 1132 aaKnown RBP6.82□□□□□ -1.32
XPA-204ENST00000496104 CA12O43570 354 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 EIF5BO60841 1220 aaKnown RBP6.82□□□□□ -1.32
XPA-204ENST00000496104 TMF1P82094 1093 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 FOXC1Q12948 553 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 NBPF1Q3BBV0 1214 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 PARP9Q8IXQ6 854 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 KCNH5Q8NCM2 988 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 SLC4A9Q96Q91 983 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 BEGAINQ9BUH8 593 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 RAPGEFL1Q9UHV5 662 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 TLL2Q9Y6L7 1015 aa6.82□□□□□ -1.32
XPA-204ENST00000496104 RBBP6Q7Z6E9 1792 aaKnown RBP6.82□□□□□ -1.32
XPA-204ENST00000496104 ANKRD31Q8N7Z5 1873 aa6.81□□□□□ -1.32
XPA-204ENST00000496104 LOC102724428A0A0B4J2F2 783 aa6.81□□□□□ -1.32
XPA-204ENST00000496104 TRAF5O00463 557 aa6.81□□□□□ -1.32
XPA-204ENST00000496104 SIK1P57059 783 aa6.81□□□□□ -1.32
XPA-204ENST00000496104 PLA2G2CQ5R387 149 aa6.81□□□□□ -1.32
XPA-204ENST00000496104 NLGN1Q8N2Q7 840 aa6.81□□□□□ -1.32
XPA-204ENST00000496104 PRR14Q9BWN1 585 aa6.81□□□□□ -1.32
XPA-204ENST00000496104 GOPCQ9HD26 462 aa6.81□□□□□ -1.32
XPA-204ENST00000496104 PAPPA2Q9BXP8 1791 aa6.81□□□□□ -1.32
XPA-204ENST00000496104 CACNA1AO00555 2505 aa6.81□□□□□ -1.32
XPA-204ENST00000496104 ZNF831Q5JPB2 1677 aa6.81□□□□□ -1.32
XPA-204ENST00000496104 PRUNE2Q8WUY3 3088 aa6.8□□□□□ -1.32
XPA-204ENST00000496104 LAMA2P24043 3122 aaKnown RBP6.8□□□□□ -1.32
XPA-204ENST00000496104 POLRMTO00411 1230 aaKnown RBP6.8□□□□□ -1.32
XPA-204ENST00000496104 ECE1P42892 770 aa6.8□□□□□ -1.32
XPA-204ENST00000496104 ERFEQ4G0M1 354 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms