RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 SETDB2Q96T68 719 aa18.75■□□□□ 0.59
GAPDH-210ENST00000496049 LAMB2P55268 1798 aa18.74■□□□□ 0.59
GAPDH-210ENST00000496049 CARMIL3Q8ND23 1372 aa18.74■□□□□ 0.59
GAPDH-210ENST00000496049 CCDC85CA6NKD9 419 aa18.74■□□□□ 0.59
GAPDH-210ENST00000496049 HSP90B1P14625 803 aaKnown RBP18.74■□□□□ 0.59
GAPDH-210ENST00000496049 VEGFAP15692 232 aaPredicted RBP18.74■□□□□ 0.59
GAPDH-210ENST00000496049 UBE3BQ7Z3V4 1068 aa18.74■□□□□ 0.59
GAPDH-210ENST00000496049 NYXQ9GZU5 481 aa18.74■□□□□ 0.59
GAPDH-210ENST00000496049 PCCAP05165 728 aaPredicted RBP18.73■□□□□ 0.59
GAPDH-210ENST00000496049 ZBTB38Q8NAP3 1195 aaPredicted RBP18.73■□□□□ 0.59
GAPDH-210ENST00000496049 UTP14AQ9BVJ6 771 aaKnown RBP18.73■□□□□ 0.59
GAPDH-210ENST00000496049 C1orf115Q9H7X2 142 aa18.73■□□□□ 0.59
GAPDH-210ENST00000496049 TRMT112Q9UI30 125 aaKnown RBP18.73■□□□□ 0.59
GAPDH-210ENST00000496049 UBN2Q6ZU65 1347 aa18.73■□□□□ 0.59
GAPDH-210ENST00000496049 NBPF7P0C2Y1 421 aaPredicted RBP18.72■□□□□ 0.59
GAPDH-210ENST00000496049 KCNA3P22001 575 aa18.72■□□□□ 0.59
GAPDH-210ENST00000496049 BCL2L12Q9HB09 334 aa18.72■□□□□ 0.59
GAPDH-210ENST00000496049 CREBZFQ9NS37 354 aa18.72■□□□□ 0.59
GAPDH-210ENST00000496049 LRRFIP2Q9Y608 721 aaKnown RBP18.72■□□□□ 0.59
GAPDH-210ENST00000496049 H7C1W4 665 aa18.71■□□□□ 0.59
GAPDH-210ENST00000496049 NPHP1O15259 732 aa18.71■□□□□ 0.59
GAPDH-210ENST00000496049 HMMRO75330 724 aa18.71■□□□□ 0.59
GAPDH-210ENST00000496049 GYS1P13807 737 aa18.71■□□□□ 0.59
GAPDH-210ENST00000496049 RASSF7Q02833 373 aa18.71■□□□□ 0.59
GAPDH-210ENST00000496049 TBC1D9BQ66K14 1250 aa18.71■□□□□ 0.59
GAPDH-210ENST00000496049 BICDL1Q6ZP65 573 aa18.71■□□□□ 0.59
GAPDH-210ENST00000496049 RPAP2Q8IXW5 612 aaPredicted RBP18.71■□□□□ 0.59
GAPDH-210ENST00000496049 SH3TC1Q8TE82 1336 aa18.71■□□□□ 0.59
GAPDH-210ENST00000496049 CDHR2Q9BYE9 1310 aa18.71■□□□□ 0.59
GAPDH-210ENST00000496049 DALRD3Q5D0E6 543 aaKnown RBP18.7■□□□□ 0.58
GAPDH-210ENST00000496049 NLGN1Q8N2Q7 840 aa18.7■□□□□ 0.58
GAPDH-210ENST00000496049 RWDD1Q9H446 243 aaPredicted RBP18.7■□□□□ 0.58
GAPDH-210ENST00000496049 PIM2Q9P1W9 311 aa18.7■□□□□ 0.58
GAPDH-210ENST00000496049 TNRC18O15417 2968 aaPredicted RBP18.69■□□□□ 0.58
GAPDH-210ENST00000496049 CNTNAP1P78357 1384 aa18.69■□□□□ 0.58
GAPDH-210ENST00000496049 MYH3P11055 1940 aa18.69■□□□□ 0.58
GAPDH-210ENST00000496049 GTF2E1P29083 439 aaPredicted RBP18.69■□□□□ 0.58
GAPDH-210ENST00000496049 SUSD4Q5VX71 490 aa18.69■□□□□ 0.58
GAPDH-210ENST00000496049 NBPF5PQ86XG9 351 aaPredicted RBP18.69■□□□□ 0.58
GAPDH-210ENST00000496049 FAM177BA6PVY3 158 aa18.68■□□□□ 0.58
GAPDH-210ENST00000496049 NTSR2O95665 410 aa18.68■□□□□ 0.58
GAPDH-210ENST00000496049 CEP85Q6P2H3 762 aa18.68■□□□□ 0.58
GAPDH-210ENST00000496049 ANKRD44Q8N8A2 993 aa18.68■□□□□ 0.58
GAPDH-210ENST00000496049 SUCLG2Q96I99 432 aa18.68■□□□□ 0.58
GAPDH-210ENST00000496049 PCDHB15Q9Y5E8 787 aa18.68■□□□□ 0.58
GAPDH-210ENST00000496049 GLTPD2A6NH11 291 aa18.67■□□□□ 0.58
GAPDH-210ENST00000496049 RGS19P49795 217 aa18.67■□□□□ 0.58
GAPDH-210ENST00000496049 CASP7P55210 303 aa18.67■□□□□ 0.58
GAPDH-210ENST00000496049 NFIXQ14938 502 aa18.67■□□□□ 0.58
GAPDH-210ENST00000496049 RTL5Q5HYW3 569 aaPredicted RBP18.67■□□□□ 0.58
GAPDH-210ENST00000496049 TPTE2Q6XPS3 522 aa18.67■□□□□ 0.58
GAPDH-210ENST00000496049 FAM89AQ96GI7 184 aa18.67■□□□□ 0.58
GAPDH-210ENST00000496049 DDX60Q8IY21 1712 aaKnown RBP18.66■□□□□ 0.58
GAPDH-210ENST00000496049 IRS4O14654 1257 aaPredicted RBP18.66■□□□□ 0.58
GAPDH-210ENST00000496049 HDAC1Q13547 482 aaPredicted RBP18.66■□□□□ 0.58
GAPDH-210ENST00000496049 B4GALNT3Q6L9W6 998 aa18.66■□□□□ 0.58
GAPDH-210ENST00000496049 CNBD1Q8NA66 436 aa18.66■□□□□ 0.58
GAPDH-210ENST00000496049 BICC1Q9H694 974 aaKnown RBP18.66■□□□□ 0.58
GAPDH-210ENST00000496049 HSPA8P11142 646 aaKnown RBP18.65■□□□□ 0.58
GAPDH-210ENST00000496049 ST5P78524 1137 aa18.65■□□□□ 0.58
GAPDH-210ENST00000496049 CENPQQ7L2Z9 268 aaPredicted RBP18.65■□□□□ 0.58
GAPDH-210ENST00000496049 JARID2Q92833 1246 aaPredicted RBP18.65■□□□□ 0.58
GAPDH-210ENST00000496049 PLA2G12BQ9BX93 195 aa18.65■□□□□ 0.58
GAPDH-210ENST00000496049 PARP3Q9Y6F1 533 aa18.65■□□□□ 0.58
GAPDH-210ENST00000496049 ZC3H4Q9UPT8 1303 aaKnown RBP18.65■□□□□ 0.58
GAPDH-210ENST00000496049 SRGAP3O43295 1099 aa18.64■□□□□ 0.57
GAPDH-210ENST00000496049 PDE8AO60658 829 aa18.64■□□□□ 0.57
GAPDH-210ENST00000496049 VEGFBP49765 207 aa18.64■□□□□ 0.57
GAPDH-210ENST00000496049 MTX1Q13505 466 aa18.64■□□□□ 0.57
GAPDH-210ENST00000496049 CHMP3Q9Y3E7 222 aa18.64■□□□□ 0.57
GAPDH-210ENST00000496049 CHRNA5P30532 468 aa18.63■□□□□ 0.57
GAPDH-210ENST00000496049 CTSWP56202 376 aa18.63■□□□□ 0.57
GAPDH-210ENST00000496049 ATP8B2P98198 1209 aa18.63■□□□□ 0.57
GAPDH-210ENST00000496049 RABL6Q3YEC7 729 aaPredicted RBP18.63■□□□□ 0.57
GAPDH-210ENST00000496049 WBP1LQ9NX94 342 aa18.63■□□□□ 0.57
GAPDH-210ENST00000496049 RIC1Q4ADV7 1423 aa18.63■□□□□ 0.57
GAPDH-210ENST00000496049 NRXN2Q9P2S2 1712 aa18.63■□□□□ 0.57
GAPDH-210ENST00000496049 POTECB2RU33 542 aa18.62■□□□□ 0.57
GAPDH-210ENST00000496049 TM4SF1P30408 202 aa18.62■□□□□ 0.57
GAPDH-210ENST00000496049 NUTM1Q86Y26 1132 aa18.62■□□□□ 0.57
GAPDH-210ENST00000496049 POLRMTO00411 1230 aaKnown RBP18.61■□□□□ 0.57
GAPDH-210ENST00000496049 SERPINB2P05120 415 aa18.61■□□□□ 0.57
GAPDH-210ENST00000496049 ERFEQ4G0M1 354 aa18.61■□□□□ 0.57
GAPDH-210ENST00000496049 CHADLQ6NUI6 762 aa18.61■□□□□ 0.57
GAPDH-210ENST00000496049 LMBR1LQ6UX01 489 aa18.61■□□□□ 0.57
GAPDH-210ENST00000496049 GCC1Q96CN9 775 aa18.61■□□□□ 0.57
GAPDH-210ENST00000496049 KAZALD1Q96I82 304 aa18.61■□□□□ 0.57
GAPDH-210ENST00000496049 ABCC12Q96J65 1359 aa18.6■□□□□ 0.57
GAPDH-210ENST00000496049 LMNB1P20700 586 aa18.6■□□□□ 0.57
GAPDH-210ENST00000496049 FOXO4P98177 505 aa18.6■□□□□ 0.57
GAPDH-210ENST00000496049 DDR1Q08345 913 aa18.6■□□□□ 0.57
GAPDH-210ENST00000496049 CCDC152Q4G0S7 254 aa18.6■□□□□ 0.57
GAPDH-210ENST00000496049 SSH3Q8TE77 659 aa18.6■□□□□ 0.57
GAPDH-210ENST00000496049 PNMA6EA0A0J9YXQ4 647 aa18.59■□□□□ 0.57
GAPDH-210ENST00000496049 POTEIP0CG38 1075 aa18.59■□□□□ 0.57
GAPDH-210ENST00000496049 POTEJP0CG39 1038 aa18.59■□□□□ 0.57
GAPDH-210ENST00000496049 HCLS1P14317 486 aaPredicted RBP18.59■□□□□ 0.57
GAPDH-210ENST00000496049 POLA2Q14181 598 aa18.59■□□□□ 0.57
GAPDH-210ENST00000496049 CCDC57Q2TAC2 916 aa18.59■□□□□ 0.57
GAPDH-210ENST00000496049 HSP90AB4PQ58FF6 505 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms