RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 GJC2Q5T442 439 aaPredicted RBP5.87□□□□□ -1.47
NF1-216ENST00000495910 HDXQ7Z353 690 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 NUDCD3Q8IVD9 361 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 FNBP4Q8N3X1 1017 aaPredicted RBP5.87□□□□□ -1.47
NF1-216ENST00000495910 ATP6V0A1Q93050 837 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 CTTNBP2NLQ9P2B4 639 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 GNAI1P63096 354 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 VSIG1Q86XK7 387 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 SCAND2PQ9GZW5 306 aaPredicted RBP5.87□□□□□ -1.47
NF1-216ENST00000495910 KRT3P12035 628 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 PYM1Q9BRP8 204 aaKnown RBP5.87□□□□□ -1.47
NF1-216ENST00000495910 MAK16Q9BXY0 300 aaKnown RBP5.87□□□□□ -1.47
NF1-216ENST00000495910 EHMT1Q9H9B1 1298 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 SCHIP1Q9P0W5 487 aaPredicted RBP5.87□□□□□ -1.47
NF1-216ENST00000495910 AKR1B10O60218 316 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 LMNAP02545 664 aaKnown RBP5.87□□□□□ -1.47
NF1-216ENST00000495910 NLRP5P59047 1200 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 TMED1Q13445 227 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 GCC1Q96CN9 775 aa5.87□□□□□ -1.47
NF1-216ENST00000495910 SEC63Q9UGP8 760 aaKnown RBP5.87□□□□□ -1.47
NF1-216ENST00000495910 COPG1Q9Y678 874 aaKnown RBP5.87□□□□□ -1.47
NF1-216ENST00000495910 USP5P45974 858 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 AMOTQ4VCS5 1084 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 LRSAM1Q6UWE0 723 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 TAOK1Q7L7X3 1001 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 RASEFQ8IZ41 740 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 CCDC68Q9H2F9 335 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 SURF6O75683 361 aaKnown RBP5.86□□□□□ -1.47
NF1-216ENST00000495910 RASSF2P50749 326 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 TCERG1LQ5VWI1 586 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 RNF216Q9NWF9 866 aaPredicted RBP5.86□□□□□ -1.47
NF1-216ENST00000495910 PPME1Q9Y570 386 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 TLDC2A0PJX2 215 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 GIPC1O14908 333 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 PEX19P40855 299 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 VAV2P52735 878 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 NUTM1Q86Y26 1132 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 ZNF280CQ8ND82 737 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 STRN4Q9NRL3 753 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 PCYT1AP49585 367 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 UIMC1Q96RL1 719 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 LRRC27Q9C0I9 530 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 NDUFAB1O14561 156 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 MAFGO15525 162 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 STX6O43752 255 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 POLD1P28340 1107 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 PNMA8AQ86V59 439 aaPredicted RBP5.86□□□□□ -1.47
NF1-216ENST00000495910 GPR161Q8N6U8 529 aaKnown RBP5.86□□□□□ -1.47
NF1-216ENST00000495910 FBXO2Q9UK22 296 aaPredicted RBP5.86□□□□□ -1.47
NF1-216ENST00000495910 SLC8A1P32418 973 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 CNNM3Q8NE01 707 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 ZCRB1Q8TBF4 217 aaKnown RBP5.86□□□□□ -1.47
NF1-216ENST00000495910 ANLNQ9NQW6 1124 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 DDX19AQ9NUU7 478 aaKnown RBP5.86□□□□□ -1.47
NF1-216ENST00000495910 TSPYL4Q9UJ04 414 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 CCNB3Q8WWL7 1395 aa5.86□□□□□ -1.47
NF1-216ENST00000495910 ADCY5O95622 1261 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 PPP1R21Q6ZMI0 780 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 PDZD8Q8NEN9 1154 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 GABPB2Q8TAK5 448 aaPredicted RBP5.85□□□□□ -1.47
NF1-216ENST00000495910 GOLGA8AA7E2F4 631 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 GOLGA8BA8MQT2 603 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 RIPK4P57078 832 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 TNNC1P63316 161 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 MPHOSPH6Q99547 160 aaKnown RBP5.85□□□□□ -1.47
NF1-216ENST00000495910 SPC25Q9HBM1 224 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 PPP1R1BQ9UD71 204 aaPredicted RBP5.85□□□□□ -1.47
NF1-216ENST00000495910 WRNQ14191 1432 aaPredicted RBP eCLIP5.85□□□□□ -1.47
NF1-216ENST00000495910 SLC4A1P02730 911 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 MLECQ14165 292 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 INF2Q27J81 1249 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 CROCCP2Q86T23 111 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 UBLCP1Q8WVY7 318 aaPredicted RBP5.85□□□□□ -1.47
NF1-216ENST00000495910 SDCCAG3Q96C92 435 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 DRC3Q9H069 523 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 A0A1B0GW55 424 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 HNRNPCL2B2RXH8 293 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 HNRNPCL1O60812 293 aaKnown RBP5.85□□□□□ -1.47
NF1-216ENST00000495910 BAG4O95429 457 aaKnown RBP5.85□□□□□ -1.47
NF1-216ENST00000495910 CAVIN2O95810 425 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 CCDC159P0C7I6 412 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 DUX4L2P0CJ85 424 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 DUX4L3P0CJ86 424 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 DUX4L4P0CJ87 422 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 DUX4L5P0CJ88 424 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 DUX4L6P0CJ89 424 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 DUX4L7P0CJ90 424 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 PPP1R7Q15435 360 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 CCDC93Q567U6 631 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 CCDC122Q5T0U0 273 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 DDX42Q86XP3 938 aaKnown RBP eCLIP5.85□□□□□ -1.47
NF1-216ENST00000495910 DUX4Q9UBX2 424 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 CASTP20810 708 aaKnown RBP5.85□□□□□ -1.47
NF1-216ENST00000495910 CCDC102BQ68D86 513 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 TRIM68Q6AZZ1 485 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 SRGAP1Q7Z6B7 1085 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 CEP19Q96LK0 163 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 HAUS7Q99871 368 aa5.85□□□□□ -1.47
NF1-216ENST00000495910 UTP14AQ9BVJ6 771 aaKnown RBP5.85□□□□□ -1.47
NF1-216ENST00000495910 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms