RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 MPSTP25325 297 aa10.21□□□□□ -0.77
CCDC39-207ENST00000495817 ADH7P40394 386 aa10.21□□□□□ -0.77
CCDC39-207ENST00000495817 FKBP4Q02790 459 aaKnown RBP eCLIP10.21□□□□□ -0.77
CCDC39-207ENST00000495817 CHSY3Q70JA7 882 aa10.21□□□□□ -0.77
CCDC39-207ENST00000495817 TXNDC2Q86VQ3 553 aa10.21□□□□□ -0.77
CCDC39-207ENST00000495817 CCER1Q8TC90 406 aaPredicted RBP10.21□□□□□ -0.77
CCDC39-207ENST00000495817 BTBD6Q96KE9 485 aa10.21□□□□□ -0.77
CCDC39-207ENST00000495817 PIK3R2O00459 728 aa10.2□□□□□ -0.78
CCDC39-207ENST00000495817 ABL1P00519 1130 aa10.2□□□□□ -0.78
CCDC39-207ENST00000495817 PCSK2P16519 638 aa10.2□□□□□ -0.78
CCDC39-207ENST00000495817 RARAP10276 462 aa10.19□□□□□ -0.78
CCDC39-207ENST00000495817 EIF1AXP47813 144 aaKnown RBP10.19□□□□□ -0.78
CCDC39-207ENST00000495817 TRIP4Q15650 581 aaPredicted RBP10.19□□□□□ -0.78
CCDC39-207ENST00000495817 BEND7Q8N7W2 519 aaPredicted RBP10.19□□□□□ -0.78
CCDC39-207ENST00000495817 GPR152Q8TDT2 470 aa10.19□□□□□ -0.78
CCDC39-207ENST00000495817 UBE2OQ9C0C9 1292 aaKnown RBP10.19□□□□□ -0.78
CCDC39-207ENST00000495817 USP20Q9Y2K6 914 aa10.19□□□□□ -0.78
CCDC39-207ENST00000495817 PHF20L1A8MW92 1017 aa10.18□□□□□ -0.78
CCDC39-207ENST00000495817 UBAP1LF5GYI3 381 aa10.18□□□□□ -0.78
CCDC39-207ENST00000495817 ICMTO60725 284 aa10.18□□□□□ -0.78
CCDC39-207ENST00000495817 DGKGP49619 791 aa10.18□□□□□ -0.78
CCDC39-207ENST00000495817 MFAP1P55081 439 aaKnown RBP10.18□□□□□ -0.78
CCDC39-207ENST00000495817 MTMR3Q13615 1198 aa10.18□□□□□ -0.78
CCDC39-207ENST00000495817 SND1Q7KZF4 910 aaKnown RBP eCLIP10.18□□□□□ -0.78
CCDC39-207ENST00000495817 NLRP13Q86W25 1043 aa10.18□□□□□ -0.78
CCDC39-207ENST00000495817 ZFATQ9P243 1243 aa10.18□□□□□ -0.78
CCDC39-207ENST00000495817 MKL2Q9ULH7 1088 aa10.18□□□□□ -0.78
CCDC39-207ENST00000495817 SASH3O75995 380 aa10.17□□□□□ -0.78
CCDC39-207ENST00000495817 HOXD8P13378 290 aaPredicted RBP10.17□□□□□ -0.78
CCDC39-207ENST00000495817 MZF1P28698 734 aaPredicted RBP10.17□□□□□ -0.78
CCDC39-207ENST00000495817 SOX18P35713 384 aa10.17□□□□□ -0.78
CCDC39-207ENST00000495817 SERPINB4P48594 390 aa10.17□□□□□ -0.78
CCDC39-207ENST00000495817 ZNF211Q13398 564 aaPredicted RBP10.17□□□□□ -0.78
CCDC39-207ENST00000495817 DHX32Q7L7V1 743 aaKnown RBP10.17□□□□□ -0.78
CCDC39-207ENST00000495817 KRT25Q7Z3Z0 450 aa10.17□□□□□ -0.78
CCDC39-207ENST00000495817 RRAGCQ9HB90 399 aa10.17□□□□□ -0.78
CCDC39-207ENST00000495817 H3BRB1 525 aa10.16□□□□□ -0.78
CCDC39-207ENST00000495817 TARSP26639 723 aaKnown RBP10.16□□□□□ -0.78
CCDC39-207ENST00000495817 GPLD1P80108 840 aa10.16□□□□□ -0.78
CCDC39-207ENST00000495817 PDE12Q6L8Q7 609 aaKnown RBP10.16□□□□□ -0.78
CCDC39-207ENST00000495817 ATCAYQ86WG3 371 aa10.16□□□□□ -0.78
CCDC39-207ENST00000495817 GLYCTKQ8IVS8 523 aa10.16□□□□□ -0.78
CCDC39-207ENST00000495817 TRPM4Q8TD43 1214 aa10.16□□□□□ -0.78
CCDC39-207ENST00000495817 NUDT16Q96DE0 195 aaKnown RBP10.16□□□□□ -0.78
CCDC39-207ENST00000495817 TUT1Q9H6E5 874 aaKnown RBP10.16□□□□□ -0.78
CCDC39-207ENST00000495817 DNAJB12Q9NXW2 375 aaKnown RBP10.16□□□□□ -0.78
CCDC39-207ENST00000495817 SLC6A14Q9UN76 642 aa10.16□□□□□ -0.78
CCDC39-207ENST00000495817 HOXB4P17483 251 aaPredicted RBP10.15□□□□□ -0.78
CCDC39-207ENST00000495817 USP5P45974 858 aa10.15□□□□□ -0.78
CCDC39-207ENST00000495817 NRLP54845 237 aa10.15□□□□□ -0.78
CCDC39-207ENST00000495817 PRDM6Q9NQX0 595 aa10.15□□□□□ -0.78
CCDC39-207ENST00000495817 TLR7Q9NYK1 1049 aaKnown RBP10.15□□□□□ -0.78
CCDC39-207ENST00000495817 GNB5O14775 395 aa10.14□□□□□ -0.79
CCDC39-207ENST00000495817 PDGFAP04085 211 aa10.14□□□□□ -0.79
CCDC39-207ENST00000495817 PSAPP07602 524 aa10.14□□□□□ -0.79
CCDC39-207ENST00000495817 TBC1D8BQ0IIM8 1120 aa10.14□□□□□ -0.79
CCDC39-207ENST00000495817 KCNMA1Q12791 1236 aa10.14□□□□□ -0.79
CCDC39-207ENST00000495817 RGS22Q8NE09 1264 aa10.14□□□□□ -0.79
CCDC39-207ENST00000495817 TTC16Q8NEE8 873 aa10.14□□□□□ -0.79
CCDC39-207ENST00000495817 EDEM1Q92611 657 aa10.14□□□□□ -0.79
CCDC39-207ENST00000495817 SNRPNP63162 240 aaKnown RBP10.13□□□□□ -0.79
CCDC39-207ENST00000495817 PLAURQ03405 335 aa10.13□□□□□ -0.79
CCDC39-207ENST00000495817 DNM1Q05193 864 aaKnown RBP10.13□□□□□ -0.79
CCDC39-207ENST00000495817 EHHADHQ08426 723 aa10.12□□□□□ -0.79
CCDC39-207ENST00000495817 AAMPQ13685 434 aa10.12□□□□□ -0.79
CCDC39-207ENST00000495817 NPM2Q86SE8 214 aaKnown RBP10.12□□□□□ -0.79
CCDC39-207ENST00000495817 ALYREFQ86V81 257 aaKnown RBP10.12□□□□□ -0.79
CCDC39-207ENST00000495817 IGFLR1Q9H665 355 aa10.12□□□□□ -0.79
CCDC39-207ENST00000495817 ANO2Q9NQ90 1003 aa10.12□□□□□ -0.79
CCDC39-207ENST00000495817 MMP20O60882 483 aa10.11□□□□□ -0.79
CCDC39-207ENST00000495817 CCDC27Q2M243 656 aa10.11□□□□□ -0.79
CCDC39-207ENST00000495817 XKR5Q6UX68 686 aa10.11□□□□□ -0.79
CCDC39-207ENST00000495817 LINC00114Q6XXX2 140 aa10.11□□□□□ -0.79
CCDC39-207ENST00000495817 ABI2Q9NYB9 513 aaPredicted RBP10.11□□□□□ -0.79
CCDC39-207ENST00000495817 NOP53Q9NZM5 478 aaKnown RBP10.11□□□□□ -0.79
CCDC39-207ENST00000495817 FRRS1LQ9P0K9 344 aa10.11□□□□□ -0.79
CCDC39-207ENST00000495817 STARD13Q9Y3M8 1113 aa10.11□□□□□ -0.79
CCDC39-207ENST00000495817 CNTNAP5Q8WYK1 1306 aa10.1□□□□□ -0.79
CCDC39-207ENST00000495817 M0R082 166 aa10.1□□□□□ -0.79
CCDC39-207ENST00000495817 FZD6O60353 706 aa10.1□□□□□ -0.79
CCDC39-207ENST00000495817 ALBP02768 609 aa10.1□□□□□ -0.79
CCDC39-207ENST00000495817 TTC39BQ5VTQ0 682 aaPredicted RBP10.1□□□□□ -0.79
CCDC39-207ENST00000495817 C20orf204Q6ZNR8 217 aa10.1□□□□□ -0.79
CCDC39-207ENST00000495817 ZNF438Q7Z4V0 828 aa10.1□□□□□ -0.79
CCDC39-207ENST00000495817 FAM35AQ86V20 835 aa10.1□□□□□ -0.79
CCDC39-207ENST00000495817 OR13H1Q8NG92 308 aa10.1□□□□□ -0.79
CCDC39-207ENST00000495817 ZNF417Q8TAU3 575 aa10.1□□□□□ -0.79
CCDC39-207ENST00000495817 ZNF587Q96SQ5 575 aaPredicted RBP10.1□□□□□ -0.79
CCDC39-207ENST00000495817 NAGPAQ9UK23 515 aa10.1□□□□□ -0.79
CCDC39-207ENST00000495817 LILRB5O75023 590 aa10.09□□□□□ -0.79
CCDC39-207ENST00000495817 GJD3Q8N144 294 aa10.09□□□□□ -0.79
CCDC39-207ENST00000495817 MICALL1Q8N3F8 863 aa10.09□□□□□ -0.79
CCDC39-207ENST00000495817 ELP3Q9H9T3 547 aa10.09□□□□□ -0.79
CCDC39-207ENST00000495817 POLIQ9UNA4 740 aa10.09□□□□□ -0.79
CCDC39-207ENST00000495817 IRS1P35568 1242 aa10.08□□□□□ -0.8
CCDC39-207ENST00000495817 SOWAHDA6NJG2 315 aa10.07□□□□□ -0.8
CCDC39-207ENST00000495817 SPDYE3A6NKU9 549 aa10.07□□□□□ -0.8
CCDC39-207ENST00000495817 NDUFB5O43674 189 aa10.07□□□□□ -0.8
CCDC39-207ENST00000495817 ARHGAP4P98171 946 aa10.07□□□□□ -0.8
CCDC39-207ENST00000495817 ECM1Q16610 540 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms